RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 GPLD1P80108 840 aa6.78□□□□□ -1.32
PCM1-217ENST00000522998 SMG9Q9H0W8 520 aaKnown RBP6.78□□□□□ -1.32
PCM1-217ENST00000522998 ZFATQ9P243 1243 aa6.78□□□□□ -1.32
PCM1-217ENST00000522998 BCS1LQ9Y276 419 aa6.78□□□□□ -1.32
PCM1-217ENST00000522998 COBLO75128 1261 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 DKK1O94907 266 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 ALX3O95076 343 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 GRNP28799 593 aaKnown RBP6.77□□□□□ -1.33
PCM1-217ENST00000522998 CD97P48960 835 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 ADAMTS19Q8TE59 1207 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 FMNL2Q96PY5 1086 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 UCN2Q96RP3 112 aa6.77□□□□□ -1.33
PCM1-217ENST00000522998 MRPL18Q9H0U6 180 aaKnown RBP6.77□□□□□ -1.33
PCM1-217ENST00000522998 PTCD1O75127 700 aaKnown RBP6.76□□□□□ -1.33
PCM1-217ENST00000522998 RARAP10276 462 aa6.76□□□□□ -1.33
PCM1-217ENST00000522998 YBX3P16989 372 aaKnown RBP eCLIP6.76□□□□□ -1.33
PCM1-217ENST00000522998 EIF2AK2P19525 551 aaKnown RBP6.76□□□□□ -1.33
PCM1-217ENST00000522998 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
PCM1-217ENST00000522998 ARID4AP29374 1257 aaPredicted RBP6.76□□□□□ -1.33
PCM1-217ENST00000522998 INPP5BP32019 993 aa6.76□□□□□ -1.33
PCM1-217ENST00000522998 IDH3AP50213 366 aa6.76□□□□□ -1.33
PCM1-217ENST00000522998 POM121Q96HA1 1249 aa6.76□□□□□ -1.33
PCM1-217ENST00000522998 POM121CA8CG34 1229 aa6.75□□□□□ -1.33
PCM1-217ENST00000522998 F8W735 103 aaPredicted RBP6.75□□□□□ -1.33
PCM1-217ENST00000522998 SASH3O75995 380 aa6.75□□□□□ -1.33
PCM1-217ENST00000522998 SEC13P55735 322 aa6.75□□□□□ -1.33
PCM1-217ENST00000522998 HFE2Q6ZVN8 426 aa6.75□□□□□ -1.33
PCM1-217ENST00000522998 TMEM130Q8N3G9 435 aa6.75□□□□□ -1.33
PCM1-217ENST00000522998 IFT43Q96FT9 208 aa6.75□□□□□ -1.33
PCM1-217ENST00000522998 RAD21O60216 631 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 RASA1P20936 1047 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 ARSDP51689 593 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 NRLP54845 237 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 HDGFL1Q5TGJ6 251 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 HINFPQ9BQA5 517 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 C11orf16Q9NQ32 467 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 KLK14Q9P0G3 267 aa6.74□□□□□ -1.33
PCM1-217ENST00000522998 GSC2O15499 205 aa6.73□□□□□ -1.33
PCM1-217ENST00000522998 DCAF11Q8TEB1 546 aa6.73□□□□□ -1.33
PCM1-217ENST00000522998 SRA1Q9HD15 236 aaKnown RBP6.73□□□□□ -1.33
PCM1-217ENST00000522998 OAS3Q9Y6K5 1087 aaKnown RBP6.73□□□□□ -1.33
PCM1-217ENST00000522998 GLB1P16278 677 aa6.72□□□□□ -1.33
PCM1-217ENST00000522998 TAL1P17542 331 aaPredicted RBP6.72□□□□□ -1.33
PCM1-217ENST00000522998 GDF6Q6KF10 455 aaPredicted RBP6.72□□□□□ -1.33
PCM1-217ENST00000522998 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
PCM1-217ENST00000522998 RAXQ9Y2V3 346 aa6.72□□□□□ -1.33
PCM1-217ENST00000522998 KIAA1324LA8MWY0 1029 aaPredicted RBP6.71□□□□□ -1.34
PCM1-217ENST00000522998 MED26O95402 600 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 IGLV1-40P01703 118 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 IGFBP4P22692 258 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 GP2P55259 537 aaKnown RBP6.71□□□□□ -1.34
PCM1-217ENST00000522998 DGKZQ13574 1117 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 Q6ZS46 218 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 MAP4K3Q8IVH8 894 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
PCM1-217ENST00000522998 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.34
PCM1-217ENST00000522998 LGR5O75473 907 aa6.7□□□□□ -1.34
PCM1-217ENST00000522998 MICAL2O94851 1124 aa6.7□□□□□ -1.34
PCM1-217ENST00000522998 TGFB1P01137 390 aa6.7□□□□□ -1.34
PCM1-217ENST00000522998 AGGF1Q8N302 714 aaeCLIP6.7□□□□□ -1.34
PCM1-217ENST00000522998 STOML1Q9UBI4 398 aa6.7□□□□□ -1.34
PCM1-217ENST00000522998 RNF114Q9Y508 228 aa6.7□□□□□ -1.34
PCM1-217ENST00000522998 LOC102724428A0A0B4J2F2 783 aa6.69□□□□□ -1.34
PCM1-217ENST00000522998 J3QW42 95 aa6.69□□□□□ -1.34
PCM1-217ENST00000522998 GHRHP01286 108 aa6.69□□□□□ -1.34
PCM1-217ENST00000522998 SIK1P57059 783 aa6.69□□□□□ -1.34
PCM1-217ENST00000522998 SETDB1Q15047 1291 aa6.69□□□□□ -1.34
PCM1-217ENST00000522998 PSAPP07602 524 aa6.68□□□□□ -1.34
PCM1-217ENST00000522998 LARP1Q6PKG0 1096 aaKnown RBP6.68□□□□□ -1.34
PCM1-217ENST00000522998 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
PCM1-217ENST00000522998 RTCBQ9Y3I0 505 aaKnown RBP6.68□□□□□ -1.34
PCM1-217ENST00000522998 DHX15O43143 795 aaKnown RBP6.67□□□□□ -1.34
PCM1-217ENST00000522998 XYLBO75191 536 aa6.67□□□□□ -1.34
PCM1-217ENST00000522998 EGFRP00533 1210 aa6.67□□□□□ -1.34
PCM1-217ENST00000522998 C11orf91Q3C1V1 193 aa6.67□□□□□ -1.34
PCM1-217ENST00000522998 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.67□□□□□ -1.34
PCM1-217ENST00000522998 NSUN5Q96P11 429 aaKnown RBP6.67□□□□□ -1.34
PCM1-217ENST00000522998 UBL7Q96S82 380 aaPredicted RBP6.67□□□□□ -1.34
PCM1-217ENST00000522998 QTRT2Q9H974 415 aaKnown RBP6.67□□□□□ -1.34
PCM1-217ENST00000522998 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
PCM1-217ENST00000522998 UBTFP17480 764 aaKnown RBP6.66□□□□□ -1.34
PCM1-217ENST00000522998 GRIK1P39086 918 aa6.66□□□□□ -1.34
PCM1-217ENST00000522998 DPYDQ12882 1025 aa6.66□□□□□ -1.34
PCM1-217ENST00000522998 INTS5Q6P9B9 1019 aaKnown RBP6.66□□□□□ -1.34
PCM1-217ENST00000522998 ZDHHC13Q8IUH4 622 aa6.66□□□□□ -1.34
PCM1-217ENST00000522998 VTI1AQ96AJ9 217 aa6.66□□□□□ -1.34
PCM1-217ENST00000522998 MUC3BQ9H195 1237 aa6.66□□□□□ -1.34
PCM1-217ENST00000522998 OPLAHO14841 1288 aa6.65□□□□□ -1.34
PCM1-217ENST00000522998 RGL4Q8IZJ4 473 aa6.65□□□□□ -1.34
PCM1-217ENST00000522998 CMTR1Q8N1G2 835 aaKnown RBP6.65□□□□□ -1.34
PCM1-217ENST00000522998 CACTIN-AS1Q8N1I8 211 aa6.65□□□□□ -1.34
PCM1-217ENST00000522998 CEP41Q9BYV8 373 aa6.65□□□□□ -1.34
PCM1-217ENST00000522998 TFIP11Q9UBB9 837 aaKnown RBP6.65□□□□□ -1.34
PCM1-217ENST00000522998 TRIM33Q9UPN9 1127 aa6.65□□□□□ -1.34
PCM1-217ENST00000522998 MAFBQ9Y5Q3 323 aaPredicted RBP6.65□□□□□ -1.34
PCM1-217ENST00000522998 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
PCM1-217ENST00000522998 MMP20O60882 483 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 HOXD8P13378 290 aaPredicted RBP6.64□□□□□ -1.35
PCM1-217ENST00000522998 SPINK2P20155 84 aa6.64□□□□□ -1.35
PCM1-217ENST00000522998 SOX18P35713 384 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms