RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 ZBTB7BO15156 539 aaPredicted RBP15.01□□□□□ -0.01
PVT1-215ENST00000522963 EXOC6Q8TAG9 804 aa15.01□□□□□ -0.01
PVT1-215ENST00000522963 DDX19BQ9UMR2 479 aa15.01□□□□□ -0.01
PVT1-215ENST00000522963 UTYO14607 1347 aa15□□□□□ -0.01
PVT1-215ENST00000522963 KLRG2A4D1S0 409 aaPredicted RBP15□□□□□ -0.01
PVT1-215ENST00000522963 H7C1W4 665 aa15□□□□□ -0.01
PVT1-215ENST00000522963 PCCAP05165 728 aaPredicted RBP15□□□□□ -0.01
PVT1-215ENST00000522963 NBPF7P0C2Y1 421 aaPredicted RBP15□□□□□ -0.01
PVT1-215ENST00000522963 RASSF7Q02833 373 aa15□□□□□ -0.01
PVT1-215ENST00000522963 SLC10A5Q5PT55 438 aa15□□□□□ -0.01
PVT1-215ENST00000522963 RBM17Q96I25 401 aaKnown RBP15□□□□□ -0.01
PVT1-215ENST00000522963 C9orf78Q9NZ63 289 aaPredicted RBP15□□□□□ -0.01
PVT1-215ENST00000522963 IRS4O14654 1257 aaPredicted RBP14.99□□□□□ -0.01
PVT1-215ENST00000522963 ALDH1B1P30837 517 aa14.99□□□□□ -0.01
PVT1-215ENST00000522963 CASP7P55210 303 aa14.99□□□□□ -0.01
PVT1-215ENST00000522963 ZBTB38Q8NAP3 1195 aaPredicted RBP14.99□□□□□ -0.01
PVT1-215ENST00000522963 LAMB2P55268 1798 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 NEFLP07196 543 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 GNAI3P08754 354 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 CRY2Q49AN0 593 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 OLFM4Q6UX06 510 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 UBE3BQ7Z3V4 1068 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
PVT1-215ENST00000522963 CCDC88AQ3V6T2 1871 aa14.97□□□□□ -0.01
PVT1-215ENST00000522963 UBTFL1P0CB47 393 aaPredicted RBP14.97□□□□□ -0.01
PVT1-215ENST00000522963 C9orf131Q5VYM1 1079 aa14.97□□□□□ -0.01
PVT1-215ENST00000522963 SUCLG2Q96I99 432 aa14.97□□□□□ -0.01
PVT1-215ENST00000522963 RIC1Q4ADV7 1423 aa14.97□□□□□ -0.01
PVT1-215ENST00000522963 DDX60Q8IY21 1712 aaKnown RBP14.97□□□□□ -0.01
PVT1-215ENST00000522963 TAF1P21675 1872 aa14.97□□□□□ -0.01
PVT1-215ENST00000522963 DDX46Q7L014 1031 aaKnown RBP14.96□□□□□ -0.01
PVT1-215ENST00000522963 CCDC85AQ96PX6 553 aaPredicted RBP14.96□□□□□ -0.01
PVT1-215ENST00000522963 CHMP4BQ9H444 224 aaKnown RBP14.96□□□□□ -0.01
PVT1-215ENST00000522963 C1orf115Q9H7X2 142 aa14.96□□□□□ -0.01
PVT1-215ENST00000522963 RNF181Q9P0P0 153 aa14.96□□□□□ -0.01
PVT1-215ENST00000522963 CDHR2Q9BYE9 1310 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 SBF1O95248 1867 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 PPEF1O14829 653 aaPredicted RBP14.95□□□□□ -0.02
PVT1-215ENST00000522963 GNAI2P04899 355 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 HOXA10P31260 410 aaPredicted RBP14.95□□□□□ -0.02
PVT1-215ENST00000522963 CCDC93Q567U6 631 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 SOGA3Q5TF21 947 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 ZNF526Q8TF50 670 aaPredicted RBP14.95□□□□□ -0.02
PVT1-215ENST00000522963 KAZALD1Q96I82 304 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 CRAMP1Q96RY5 1269 aa14.95□□□□□ -0.02
PVT1-215ENST00000522963 LRRFIP2Q9Y608 721 aaKnown RBP14.95□□□□□ -0.02
PVT1-215ENST00000522963 NFKBIEO00221 500 aa14.94□□□□□ -0.02
PVT1-215ENST00000522963 HSP90B1P14625 803 aaKnown RBP14.94□□□□□ -0.02
PVT1-215ENST00000522963 EPHA10Q5JZY3 1008 aa14.94□□□□□ -0.02
PVT1-215ENST00000522963 SLC51AQ86UW1 340 aa14.94□□□□□ -0.02
PVT1-215ENST00000522963 PLA2G12BQ9BX93 195 aa14.94□□□□□ -0.02
PVT1-215ENST00000522963 TMX4Q9H1E5 349 aaPredicted RBP14.94□□□□□ -0.02
PVT1-215ENST00000522963 FER1L6Q2WGJ9 1857 aa14.93□□□□□ -0.02
PVT1-215ENST00000522963 PDE8AO60658 829 aa14.93□□□□□ -0.02
PVT1-215ENST00000522963 FOXO4P98177 505 aa14.93□□□□□ -0.02
PVT1-215ENST00000522963 ZNF784Q8NCA9 323 aaPredicted RBP14.93□□□□□ -0.02
PVT1-215ENST00000522963 C7orf43Q8WVR3 580 aa14.93□□□□□ -0.02
PVT1-215ENST00000522963 TAOK3Q9H2K8 898 aa14.93□□□□□ -0.02
PVT1-215ENST00000522963 BICC1Q9H694 974 aaKnown RBP14.93□□□□□ -0.02
PVT1-215ENST00000522963 LMNB1P20700 586 aa14.92□□□□□ -0.02
PVT1-215ENST00000522963 GRAPQ13588 217 aa14.92□□□□□ -0.02
PVT1-215ENST00000522963 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
PVT1-215ENST00000522963 ANKRD44Q8N8A2 993 aa14.92□□□□□ -0.02
PVT1-215ENST00000522963 GRAPLQ8TC17 118 aaPredicted RBP14.92□□□□□ -0.02
PVT1-215ENST00000522963 HDAC5Q9UQL6 1122 aa14.92□□□□□ -0.02
PVT1-215ENST00000522963 PRELPP51888 382 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 CTSWP56202 376 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 AAMPQ13685 434 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 CCDC152Q4G0S7 254 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 RTKN2Q8IZC4 609 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 SEC31BQ9NQW1 1179 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 PCDHB15Q9Y5E8 787 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 MYH3P11055 1940 aa14.91□□□□□ -0.02
PVT1-215ENST00000522963 BBOX1O75936 387 aa14.9□□□□□ -0.02
PVT1-215ENST00000522963 RABL6Q3YEC7 729 aaPredicted RBP14.9□□□□□ -0.02
PVT1-215ENST00000522963 CEP85Q6P2H3 762 aa14.9□□□□□ -0.02
PVT1-215ENST00000522963 LMBR1LQ6UX01 489 aa14.9□□□□□ -0.02
PVT1-215ENST00000522963 CELF1Q92879 486 aaKnown RBP14.9□□□□□ -0.02
PVT1-215ENST00000522963 ZNF277Q9NRM2 450 aaPredicted RBP14.9□□□□□ -0.02
PVT1-215ENST00000522963 CSF1RP07333 972 aa14.89□□□□□ -0.03
PVT1-215ENST00000522963 FKBP4Q02790 459 aaKnown RBP eCLIP14.89□□□□□ -0.03
PVT1-215ENST00000522963 CC2D2BQ6DHV5 1058 aa14.89□□□□□ -0.03
PVT1-215ENST00000522963 TTLL11Q8NHH1 800 aa14.89□□□□□ -0.03
PVT1-215ENST00000522963 CHMP3Q9Y3E7 222 aa14.89□□□□□ -0.03
PVT1-215ENST00000522963 ATP6V0A2Q9Y487 856 aa14.89□□□□□ -0.03
PVT1-215ENST00000522963 GOLGB1Q14789 3259 aaKnown RBP14.89□□□□□ -0.03
PVT1-215ENST00000522963 ATP8B2P98198 1209 aa14.88□□□□□ -0.03
PVT1-215ENST00000522963 MTX1Q13505 466 aa14.88□□□□□ -0.03
PVT1-215ENST00000522963 ERICH6BQ5W0A0 696 aa14.88□□□□□ -0.03
PVT1-215ENST00000522963 SIRT2Q8IXJ6 389 aa14.88□□□□□ -0.03
PVT1-215ENST00000522963 GPBP1L1Q9HC44 474 aaPredicted RBP14.88□□□□□ -0.03
PVT1-215ENST00000522963 PNMA6EA0A0J9YXQ4 647 aa14.87□□□□□ -0.03
PVT1-215ENST00000522963 RPS8P62241 208 aaKnown RBP14.87□□□□□ -0.03
PVT1-215ENST00000522963 FAM161AQ3B820 660 aa14.87□□□□□ -0.03
PVT1-215ENST00000522963 RPAP2Q8IXW5 612 aaPredicted RBP14.87□□□□□ -0.03
PVT1-215ENST00000522963 SP8Q8IXZ3 490 aa14.87□□□□□ -0.03
PVT1-215ENST00000522963 MPNDQ8N594 471 aa14.87□□□□□ -0.03
PVT1-215ENST00000522963 GREM2Q9H772 168 aa14.87□□□□□ -0.03
PVT1-215ENST00000522963 LTBP3Q9NS15 1303 aa14.87□□□□□ -0.03
PVT1-215ENST00000522963 DICER1Q9UPY3 1922 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms