RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 EPHX2P34913 555 aa26.7■■□□□ 1.86
SDCBP-209ENST00000522243 DPP8Q6V1X1 898 aaPredicted RBP26.7■■□□□ 1.86
SDCBP-209ENST00000522243 MPNDQ8N594 471 aa26.7■■□□□ 1.86
SDCBP-209ENST00000522243 LDHDQ86WU2 507 aa26.69■■□□□ 1.86
SDCBP-209ENST00000522243 CLEC11AQ9Y240 323 aa26.69■■□□□ 1.86
SDCBP-209ENST00000522243 SF3B3Q15393 1217 aaKnown RBP26.68■■□□□ 1.86
SDCBP-209ENST00000522243 SUPT20HQ8NEM7 779 aa26.68■■□□□ 1.86
SDCBP-209ENST00000522243 JARID2Q92833 1246 aaPredicted RBP26.68■■□□□ 1.86
SDCBP-209ENST00000522243 CELF1Q92879 486 aaKnown RBP26.68■■□□□ 1.86
SDCBP-209ENST00000522243 COL4A1P02462 1669 aa26.67■■□□□ 1.86
SDCBP-209ENST00000522243 RTFDC1Q9BY42 306 aaPredicted RBP26.67■■□□□ 1.86
SDCBP-209ENST00000522243 DDX58O95786 925 aaKnown RBP26.66■■□□□ 1.86
SDCBP-209ENST00000522243 TWISTNBQ3B726 338 aaPredicted RBP26.66■■□□□ 1.86
SDCBP-209ENST00000522243 ZBTB38Q8NAP3 1195 aaPredicted RBP26.66■■□□□ 1.86
SDCBP-209ENST00000522243 METTL22Q9BUU2 404 aaPredicted RBP26.66■■□□□ 1.86
SDCBP-209ENST00000522243 CHMP4AQ9BY43 222 aa26.66■■□□□ 1.86
SDCBP-209ENST00000522243 MAP3K2Q9Y2U5 619 aa26.66■■□□□ 1.86
SDCBP-209ENST00000522243 LTBP1Q14766 1721 aa26.65■■□□□ 1.86
SDCBP-209ENST00000522243 STK31Q9BXU1 1019 aa26.65■■□□□ 1.86
SDCBP-209ENST00000522243 VPS33BQ9H267 617 aa26.64■■□□□ 1.86
SDCBP-209ENST00000522243 LRRC37AA6NMS7 1700 aa26.64■■□□□ 1.85
SDCBP-209ENST00000522243 IL16Q14005 1332 aa26.64■■□□□ 1.85
SDCBP-209ENST00000522243 ADAMTSL1Q8N6G6 1762 aa26.63■■□□□ 1.85
SDCBP-209ENST00000522243 LMOD1P29536 600 aaPredicted RBP26.63■■□□□ 1.85
SDCBP-209ENST00000522243 TMC4Q7Z404 712 aa26.63■■□□□ 1.85
SDCBP-209ENST00000522243 PNMA8AQ86V59 439 aaPredicted RBP26.63■■□□□ 1.85
SDCBP-209ENST00000522243 FAM9BQ8IZU0 186 aa26.63■■□□□ 1.85
SDCBP-209ENST00000522243 CCDC191Q8NCU4 936 aa26.63■■□□□ 1.85
SDCBP-209ENST00000522243 CWC25Q9NXE8 425 aaPredicted RBP26.63■■□□□ 1.85
SDCBP-209ENST00000522243 PI4KAP2A4QPH2 592 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 PCCAP05165 728 aaPredicted RBP26.62■■□□□ 1.85
SDCBP-209ENST00000522243 EPS15P42566 896 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 SCNN1DP51172 638 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 NCBP3Q53F19 620 aaKnown RBP26.62■■□□□ 1.85
SDCBP-209ENST00000522243 KSR2Q6VAB6 950 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 G2E3Q7L622 706 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 PI4KAP1Q8N8J0 262 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 JMYQ8N9B5 988 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 ZNRF3Q9ULT6 936 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 DUOX1Q9NRD9 1551 aa26.62■■□□□ 1.85
SDCBP-209ENST00000522243 CXCL9Q07325 125 aa26.61■■□□□ 1.85
SDCBP-209ENST00000522243 KIAA2012Q0VF49 1180 aa26.61■■□□□ 1.85
SDCBP-209ENST00000522243 SEC31BQ9NQW1 1179 aa26.61■■□□□ 1.85
SDCBP-209ENST00000522243 NSFL1CQ9UNZ2 370 aaKnown RBP26.61■■□□□ 1.85
SDCBP-209ENST00000522243 FANCIQ9NVI1 1328 aa26.61■■□□□ 1.85
SDCBP-209ENST00000522243 MAP1SQ66K74 1059 aaPredicted RBP26.6■■□□□ 1.85
SDCBP-209ENST00000522243 CCDC85AQ96PX6 553 aaPredicted RBP26.6■■□□□ 1.85
SDCBP-209ENST00000522243 PASKQ96RG2 1323 aa26.6■■□□□ 1.85
SDCBP-209ENST00000522243 ITGBL1O95965 494 aaPredicted RBP26.59■■□□□ 1.85
SDCBP-209ENST00000522243 SLC4A2P04920 1241 aa26.59■■□□□ 1.85
SDCBP-209ENST00000522243 RPS8P62241 208 aaKnown RBP26.59■■□□□ 1.85
SDCBP-209ENST00000522243 PDE8AO60658 829 aa26.58■■□□□ 1.85
SDCBP-209ENST00000522243 IGKV5-2P06315 115 aa26.58■■□□□ 1.85
SDCBP-209ENST00000522243 GPSM2P81274 684 aa26.58■■□□□ 1.85
SDCBP-209ENST00000522243 WDR63Q8IWG1 891 aa26.58■■□□□ 1.85
SDCBP-209ENST00000522243 CREBZFQ9NS37 354 aa26.58■■□□□ 1.85
SDCBP-209ENST00000522243 RIMBP2O15034 1052 aa26.57■■□□□ 1.84
SDCBP-209ENST00000522243 RAD17O75943 681 aa26.57■■□□□ 1.84
SDCBP-209ENST00000522243 HSP90B1P14625 803 aaKnown RBP26.57■■□□□ 1.84
SDCBP-209ENST00000522243 CNTROBQ8N137 903 aa26.57■■□□□ 1.84
SDCBP-209ENST00000522243 C6orf229H3BNL8 230 aa26.56■■□□□ 1.84
SDCBP-209ENST00000522243 CWF19L2Q2TBE0 894 aaKnown RBP26.56■■□□□ 1.84
SDCBP-209ENST00000522243 CIAPIN1Q6FI81 312 aa26.56■■□□□ 1.84
SDCBP-209ENST00000522243 MKRN1Q9UHC7 482 aaKnown RBP26.56■■□□□ 1.84
SDCBP-209ENST00000522243 YDJCA8MPS7 323 aa26.55■■□□□ 1.84
SDCBP-209ENST00000522243 EXOSC9Q06265 439 aaKnown RBP26.55■■□□□ 1.84
SDCBP-209ENST00000522243 NEXNQ0ZGT2 675 aa26.55■■□□□ 1.84
SDCBP-209ENST00000522243 WASHC4Q2M389 1173 aa26.55■■□□□ 1.84
SDCBP-209ENST00000522243 CCDC152Q4G0S7 254 aa26.55■■□□□ 1.84
SDCBP-209ENST00000522243 POLLQ9UGP5 575 aa26.55■■□□□ 1.84
SDCBP-209ENST00000522243 VAMP4O75379 141 aa26.54■■□□□ 1.84
SDCBP-209ENST00000522243 GMPSP49915 693 aaPredicted RBP26.54■■□□□ 1.84
SDCBP-209ENST00000522243 GPR101Q96P66 508 aaPredicted RBP26.54■■□□□ 1.84
SDCBP-209ENST00000522243 SPINK5Q9NQ38 1064 aaPredicted RBP26.54■■□□□ 1.84
SDCBP-209ENST00000522243 GPRC5DQ9NZD1 345 aa26.54■■□□□ 1.84
SDCBP-209ENST00000522243 BCL2L13Q9BXK5 485 aa26.53■■□□□ 1.84
SDCBP-209ENST00000522243 DBNDD1Q9H9R9 158 aa26.53■■□□□ 1.84
SDCBP-209ENST00000522243 CDHR2Q9BYE9 1310 aa26.53■■□□□ 1.84
SDCBP-209ENST00000522243 NEURL1BA8MQ27 555 aa26.52■■□□□ 1.84
SDCBP-209ENST00000522243 FLIIQ13045 1269 aa26.52■■□□□ 1.84
SDCBP-209ENST00000522243 USP50Q70EL3 339 aaPredicted RBP26.52■■□□□ 1.84
SDCBP-209ENST00000522243 TMEM88BA6NKF7 163 aa26.51■■□□□ 1.83
SDCBP-209ENST00000522243 TNIP1Q15025 636 aa26.51■■□□□ 1.83
SDCBP-209ENST00000522243 TBC1D16Q8TBP0 767 aa26.51■■□□□ 1.83
SDCBP-209ENST00000522243 ADARB2Q9NS39 739 aaKnown RBP26.51■■□□□ 1.83
SDCBP-209ENST00000522243 MYH3P11055 1940 aa26.5■■□□□ 1.83
SDCBP-209ENST00000522243 FKBP5Q13451 457 aaPredicted RBP26.5■■□□□ 1.83
SDCBP-209ENST00000522243 DOK7Q18PE1 504 aa26.5■■□□□ 1.83
SDCBP-209ENST00000522243 CACNA1FO60840 1977 aa26.49■■□□□ 1.83
SDCBP-209ENST00000522243 CTSWP56202 376 aa26.49■■□□□ 1.83
SDCBP-209ENST00000522243 FMR1Q06787 632 aaKnown RBP eCLIP26.49■■□□□ 1.83
SDCBP-209ENST00000522243 EYA3Q99504 573 aa26.49■■□□□ 1.83
SDCBP-209ENST00000522243 ANKIB1Q9P2G1 1089 aa26.49■■□□□ 1.83
SDCBP-209ENST00000522243 SHTN1A0MZ66 631 aa26.48■■□□□ 1.83
SDCBP-209ENST00000522243 UBE3BQ7Z3V4 1068 aa26.48■■□□□ 1.83
SDCBP-209ENST00000522243 ANKRD18AQ8IVF6 992 aa26.48■■□□□ 1.83
SDCBP-209ENST00000522243 SPEF2Q9C093 1822 aa26.48■■□□□ 1.83
SDCBP-209ENST00000522243 ECE2O60344 883 aa26.47■■□□□ 1.83
SDCBP-209ENST00000522243 UFL1O94874 794 aa26.47■■□□□ 1.83
SDCBP-209ENST00000522243 TTLL11Q8NHH1 800 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms