RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 SLC12A7Q9Y666 1083 aa16.02■□□□□ 0.15
SYNPO-205ENST00000522122 ARHGEF10O15013 1369 aa16.02■□□□□ 0.15
SYNPO-205ENST00000522122 CNNM3Q8NE01 707 aa16.02■□□□□ 0.15
SYNPO-205ENST00000522122 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.15
SYNPO-205ENST00000522122 GOLGA6L10A6NI86 522 aa16.01■□□□□ 0.15
SYNPO-205ENST00000522122 G2E3Q7L622 706 aa16.01■□□□□ 0.15
SYNPO-205ENST00000522122 KIAA1328Q86T90 577 aa16.01■□□□□ 0.15
SYNPO-205ENST00000522122 ORC3Q9UBD5 711 aaPredicted RBP16.01■□□□□ 0.15
SYNPO-205ENST00000522122 LMTK2Q8IWU2 1503 aa16.01■□□□□ 0.15
SYNPO-205ENST00000522122 ERLIN2O94905 339 aa16.01■□□□□ 0.15
SYNPO-205ENST00000522122 CCDC94Q9BW85 323 aaPredicted RBP16.01■□□□□ 0.15
SYNPO-205ENST00000522122 TMEM63CQ9P1W3 806 aa16.01■□□□□ 0.15
SYNPO-205ENST00000522122 ATP5J2-PTCD1G3V325 749 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 IFIT3O14879 490 aaKnown RBP16■□□□□ 0.15
SYNPO-205ENST00000522122 DNM1Q05193 864 aaKnown RBP16■□□□□ 0.15
SYNPO-205ENST00000522122 MED14O60244 1454 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
SYNPO-205ENST00000522122 CCDC102AQ96A19 550 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 REREQ9P2R6 1566 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
SYNPO-205ENST00000522122 GOLGA8AA7E2F4 631 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 BIN1O00499 593 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 ZNF853P0CG23 659 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 GPT2Q8TD30 523 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 GBP3Q9H0R5 595 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 CHPF2Q9P2E5 772 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 CEBPAP49715 358 aaPredicted RBP16■□□□□ 0.15
SYNPO-205ENST00000522122 HSP90AB3PQ58FF7 597 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 IFNL2Q8IZJ0 200 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 BRF1Q92994 677 aa16■□□□□ 0.15
SYNPO-205ENST00000522122 PAXBP1Q9Y5B6 917 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 RBM8AQ9Y5S9 174 aaKnown RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 CTCFLQ8NI51 663 aaPredicted RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 PHAXQ9H814 394 aaKnown RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 KIF5CO60282 957 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 TAF3Q5VWG9 929 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 ANKRD13DQ6ZTN6 518 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 RNF41Q9H4P4 317 aaPredicted RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 TTC12Q9H892 705 aaPredicted RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 TRMT112Q9UI30 125 aaKnown RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 RDXP35241 583 aaKnown RBP15.99■□□□□ 0.15
SYNPO-205ENST00000522122 KIF4BQ2VIQ3 1234 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 CCDC148Q8NFR7 591 aa15.99■□□□□ 0.15
SYNPO-205ENST00000522122 ANKRD18BA2A2Z9 1011 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 ALDH1L1O75891 902 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 IARSP41252 1262 aaKnown RBP15.98■□□□□ 0.15
SYNPO-205ENST00000522122 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
SYNPO-205ENST00000522122 TCEANC2Q96MN5 208 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 POLR3DP05423 398 aaPredicted RBP15.98■□□□□ 0.15
SYNPO-205ENST00000522122 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 CAVIN4Q5BKX8 364 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 TMC6Q7Z403 805 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 CWC25Q9NXE8 425 aaPredicted RBP15.98■□□□□ 0.15
SYNPO-205ENST00000522122 INO80Q9ULG1 1556 aaPredicted RBP15.98■□□□□ 0.15
SYNPO-205ENST00000522122 SYT1P21579 422 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 ANO6Q4KMQ2 910 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 RGS12O14924 1447 aa15.98■□□□□ 0.15
SYNPO-205ENST00000522122 HAND2P61296 217 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 LDHAL6AQ6ZMR3 332 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 ZNF397Q8NF99 534 aaPredicted RBP15.97■□□□□ 0.15
SYNPO-205ENST00000522122 NEURL4Q96JN8 1562 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 ERICH4A6NGS2 130 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 SNRPA1P09661 255 aaKnown RBP15.97■□□□□ 0.15
SYNPO-205ENST00000522122 BICDL1Q6ZP65 573 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 SNX14Q9Y5W7 946 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 CCDC171Q6TFL3 1326 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 RAD50Q92878 1312 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 SLC5A1P13866 664 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 PKP1Q13835 747 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 RUFY3Q7L099 469 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 TULP4Q9NRJ4 1543 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 PPRC1Q5VV67 1664 aaKnown RBP15.97■□□□□ 0.15
SYNPO-205ENST00000522122 RANBP6O60518 1105 aaKnown RBP15.97■□□□□ 0.15
SYNPO-205ENST00000522122 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
SYNPO-205ENST00000522122 SIRT2Q8IXJ6 389 aa15.97■□□□□ 0.15
SYNPO-205ENST00000522122 PPFIA3O75145 1194 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 CASQ1P31415 396 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 CCDC191Q8NCU4 936 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 KIAA0754O94854 1291 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 HSPA4P34932 840 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 FAM193AP78312 1265 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 NCOA7Q8NI08 942 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 CPSF1Q10570 1443 aaKnown RBP15.96■□□□□ 0.15
SYNPO-205ENST00000522122 GRM8O00222 908 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 TYRO3Q06418 890 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 ZNF287Q9HBT7 754 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
SYNPO-205ENST00000522122 ANKRD24Q8TF21 1146 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 OSBPL3Q9H4L5 887 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 NCKAP5LQ9HCH0 1330 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 TTF1Q15361 905 aaPredicted RBP15.95■□□□□ 0.14
SYNPO-205ENST00000522122 KSR2Q6VAB6 950 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
SYNPO-205ENST00000522122 EYA1Q99502 592 aa15.95■□□□□ 0.14
SYNPO-205ENST00000522122 CRACR2AQ9BSW2 395 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms