RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CHD1LQ86WJ1 897 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 CCDC24Q8N4L8 307 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 FAM161AQ3B820 660 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 HSP90AB4PQ58FF6 505 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 SLC10A5Q5PT55 438 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 CNBD1Q8NA66 436 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 BCL11AQ9H165 835 aa26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 NOP58Q9Y2X3 529 aaKnown RBP26.49■■□□□ 1.83
R3HCC1-208ENST00000522012 RAB11FIP3O75154 756 aa26.48■■□□□ 1.83
R3HCC1-208ENST00000522012 DDR1Q08345 913 aa26.48■■□□□ 1.83
R3HCC1-208ENST00000522012 LNPKQ9C0E8 428 aa26.48■■□□□ 1.83
R3HCC1-208ENST00000522012 SIL1Q9H173 461 aa26.48■■□□□ 1.83
R3HCC1-208ENST00000522012 GREM2Q9H772 168 aa26.48■■□□□ 1.83
R3HCC1-208ENST00000522012 TUBGCP6Q96RT7 1819 aa26.48■■□□□ 1.83
R3HCC1-208ENST00000522012 POLRMTO00411 1230 aaKnown RBP26.47■■□□□ 1.83
R3HCC1-208ENST00000522012 PTPN12Q05209 780 aaKnown RBP26.47■■□□□ 1.83
R3HCC1-208ENST00000522012 G3BP1Q13283 466 aaKnown RBP eCLIP26.47■■□□□ 1.83
R3HCC1-208ENST00000522012 IFIT5Q13325 482 aaKnown RBP26.47■■□□□ 1.83
R3HCC1-208ENST00000522012 COPRSQ9NQ92 184 aa26.47■■□□□ 1.83
R3HCC1-208ENST00000522012 ABCC12Q96J65 1359 aa26.47■■□□□ 1.83
R3HCC1-208ENST00000522012 LRRCC1Q9C099 1032 aa26.46■■□□□ 1.83
R3HCC1-208ENST00000522012 SMARCA5O60264 1052 aaPredicted RBP26.45■■□□□ 1.83
R3HCC1-208ENST00000522012 ITGA6P23229 1130 aa26.45■■□□□ 1.83
R3HCC1-208ENST00000522012 RGS3P49796 1198 aa26.45■■□□□ 1.83
R3HCC1-208ENST00000522012 CCDC152Q4G0S7 254 aa26.45■■□□□ 1.83
R3HCC1-208ENST00000522012 TAF7LQ5H9L4 462 aa26.45■■□□□ 1.83
R3HCC1-208ENST00000522012 PRR5LQ6MZQ0 368 aa26.45■■□□□ 1.83
R3HCC1-208ENST00000522012 ANKRD18BA2A2Z9 1011 aa26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 MMP10P09238 476 aa26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 ZNF594Q96JF6 807 aaPredicted RBP26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 NLRP3Q96P20 1036 aa26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 COL24A1Q17RW2 1714 aa26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 ST5P78524 1137 aa26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 C3orf67Q6ZVT6 689 aa26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 PDGFDQ9GZP0 370 aaPredicted RBP26.44■■□□□ 1.82
R3HCC1-208ENST00000522012 ERC1Q8IUD2 1116 aa26.43■■□□□ 1.82
R3HCC1-208ENST00000522012 RHPN1Q8TCX5 695 aa26.43■■□□□ 1.82
R3HCC1-208ENST00000522012 KIF1BPQ96EK5 621 aa26.43■■□□□ 1.82
R3HCC1-208ENST00000522012 PARP3Q9Y6F1 533 aa26.43■■□□□ 1.82
R3HCC1-208ENST00000522012 SF3B3Q15393 1217 aaKnown RBP26.42■■□□□ 1.82
R3HCC1-208ENST00000522012 PDE4AP27815 886 aa26.41■■□□□ 1.82
R3HCC1-208ENST00000522012 R3HDM1Q15032 1099 aaKnown RBP26.4■■□□□ 1.82
R3HCC1-208ENST00000522012 IL1RAPL2Q9NP60 686 aa26.4■■□□□ 1.82
R3HCC1-208ENST00000522012 C16orf71Q8IYS4 520 aaPredicted RBP26.39■■□□□ 1.82
R3HCC1-208ENST00000522012 SEC31BQ9NQW1 1179 aa26.39■■□□□ 1.82
R3HCC1-208ENST00000522012 EYA2O00167 538 aa26.39■■□□□ 1.81
R3HCC1-208ENST00000522012 SASH1O94885 1247 aa26.38■■□□□ 1.81
R3HCC1-208ENST00000522012 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
R3HCC1-208ENST00000522012 SLC16A10Q8TF71 515 aa26.38■■□□□ 1.81
R3HCC1-208ENST00000522012 PUS3Q9BZE2 481 aaKnown RBP26.38■■□□□ 1.81
R3HCC1-208ENST00000522012 RTL9Q8NET4 1388 aa26.37■■□□□ 1.81
R3HCC1-208ENST00000522012 LRRC24Q50LG9 513 aa26.37■■□□□ 1.81
R3HCC1-208ENST00000522012 QSER1Q2KHR3 1735 aa26.37■■□□□ 1.81
R3HCC1-208ENST00000522012 DDX60Q8IY21 1712 aaKnown RBP26.37■■□□□ 1.81
R3HCC1-208ENST00000522012 CIAO1O76071 339 aa26.36■■□□□ 1.81
R3HCC1-208ENST00000522012 IL15P40933 162 aaPredicted RBP26.36■■□□□ 1.81
R3HCC1-208ENST00000522012 LDHAL6AQ6ZMR3 332 aa26.36■■□□□ 1.81
R3HCC1-208ENST00000522012 ATG9AQ7Z3C6 839 aa26.36■■□□□ 1.81
R3HCC1-208ENST00000522012 CNNM1Q9NRU3 951 aa26.35■■□□□ 1.81
R3HCC1-208ENST00000522012 FBXO3Q9UK99 471 aa26.35■■□□□ 1.81
R3HCC1-208ENST00000522012 TFCP2Q12800 502 aa26.34■■□□□ 1.81
R3HCC1-208ENST00000522012 CLASRPQ8N2M8 674 aaKnown RBP26.34■■□□□ 1.81
R3HCC1-208ENST00000522012 CDC5LQ99459 802 aaKnown RBP26.34■■□□□ 1.81
R3HCC1-208ENST00000522012 IGHMBP2P38935 993 aaKnown RBP26.34■■□□□ 1.81
R3HCC1-208ENST00000522012 OTUD7AQ8TE49 926 aaPredicted RBP26.34■■□□□ 1.81
R3HCC1-208ENST00000522012 MPHOSPH8Q99549 860 aa26.34■■□□□ 1.81
R3HCC1-208ENST00000522012 LAMB2P55268 1798 aa26.33■■□□□ 1.81
R3HCC1-208ENST00000522012 DDX46Q7L014 1031 aaKnown RBP26.33■■□□□ 1.81
R3HCC1-208ENST00000522012 RIC1Q4ADV7 1423 aa26.32■■□□□ 1.8
R3HCC1-208ENST00000522012 ANKRD18AQ8IVF6 992 aa26.32■■□□□ 1.8
R3HCC1-208ENST00000522012 BRIP1Q9BX63 1249 aa26.32■■□□□ 1.8
R3HCC1-208ENST00000522012 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.32■■□□□ 1.8
R3HCC1-208ENST00000522012 RPGRQ92834 1020 aaKnown RBP26.31■■□□□ 1.8
R3HCC1-208ENST00000522012 RIPOR2Q9Y4F9 1068 aa26.31■■□□□ 1.8
R3HCC1-208ENST00000522012 ZBTB7AO95365 584 aa26.3■■□□□ 1.8
R3HCC1-208ENST00000522012 AACSQ86V21 672 aa26.3■■□□□ 1.8
R3HCC1-208ENST00000522012 PLEKHM2Q8IWE5 1019 aa26.3■■□□□ 1.8
R3HCC1-208ENST00000522012 CEP126Q9P2H0 1117 aa26.3■■□□□ 1.8
R3HCC1-208ENST00000522012 METTL24Q5JXM2 366 aa26.29■■□□□ 1.8
R3HCC1-208ENST00000522012 MYH3P11055 1940 aa26.29■■□□□ 1.8
R3HCC1-208ENST00000522012 IFIT2P09913 472 aaKnown RBP26.29■■□□□ 1.8
R3HCC1-208ENST00000522012 CRY2Q49AN0 593 aa26.29■■□□□ 1.8
R3HCC1-208ENST00000522012 CELF1Q92879 486 aaKnown RBP26.29■■□□□ 1.8
R3HCC1-208ENST00000522012 EAF2Q96CJ1 260 aaPredicted RBP26.28■■□□□ 1.8
R3HCC1-208ENST00000522012 TNRC6CQ9HCJ0 1690 aaKnown RBP26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 KLRG2A4D1S0 409 aaPredicted RBP26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 PDE6BP35913 854 aa26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 RPS8P62241 208 aaKnown RBP26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 TNNI3KQ59H18 835 aa26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 RBM17Q96I25 401 aaKnown RBP26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 ATF5Q9Y2D1 282 aaPredicted RBP26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 FPGT-TNNI3KV9GXZ4 949 aa26.27■■□□□ 1.8
R3HCC1-208ENST00000522012 MX1P20591 662 aa26.26■■□□□ 1.79
R3HCC1-208ENST00000522012 CCDC8Q9H0W5 538 aaPredicted RBP26.26■■□□□ 1.79
R3HCC1-208ENST00000522012 MROH5Q6ZUA9 1318 aa26.26■■□□□ 1.79
R3HCC1-208ENST00000522012 MTFR1LQ9H019 292 aa26.25■■□□□ 1.79
R3HCC1-208ENST00000522012 BSDC1Q9NW68 430 aaPredicted RBP26.25■■□□□ 1.79
R3HCC1-208ENST00000522012 PDE1AP54750 535 aa26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 GRAPQ13588 217 aa26.24■■□□□ 1.79
R3HCC1-208ENST00000522012 GRAPLQ8TC17 118 aaPredicted RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms