RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PSMD1Q99460 953 aa12.25□□□□□ -0.45
TRAPPC9-212ENST00000521944 GTPBP6O43824 516 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 A1BGP04217 495 aa12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 HIRAP54198 1017 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 NOGQ13253 232 aa12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 JDP2Q8WYK2 163 aa12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 RNF186Q9NXI6 227 aa12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
TRAPPC9-212ENST00000521944 BCORQ6W2J9 1755 aa12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 UBR2Q8IWV8 1755 aa12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 IL6STP40189 918 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 FXR1P51114 621 aaKnown RBP eCLIP12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 EIF6P56537 245 aaKnown RBP12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 GPRC5DQ9NZD1 345 aa12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 ZNF330Q9Y3S2 320 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 CEP290O15078 2479 aa12.23□□□□□ -0.45
TRAPPC9-212ENST00000521944 TRIOBPQ9H2D6 2365 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 HTTP42858 3142 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 BRCA2P51587 3418 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 TRPA1O75762 1119 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 CTU1Q7Z7A3 348 aaKnown RBP12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 SPRYD3Q8NCJ5 442 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 GCC1Q96CN9 775 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 SAGE1Q9NXZ1 904 aa12.22□□□□□ -0.45
TRAPPC9-212ENST00000521944 CENPFP49454 3210 aa12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 NPHP1O15259 732 aa12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 IL13P35225 146 aa12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 NBPF5PQ86XG9 351 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 SLAIN1Q8ND83 568 aa12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 ZNF408Q9H9D4 720 aa12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 ADARB2Q9NS39 739 aaKnown RBP12.21□□□□□ -0.45
TRAPPC9-212ENST00000521944 RANBP2P49792 3224 aaKnown RBP12.2□□□□□ -0.46
TRAPPC9-212ENST00000521944 HUNKP57058 714 aa12.2□□□□□ -0.46
TRAPPC9-212ENST00000521944 KIF23Q02241 960 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC9-212ENST00000521944 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
TRAPPC9-212ENST00000521944 HEG1Q9ULI3 1381 aa12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 PPP1R37O75864 691 aa12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 ALDH1B1P30837 517 aa12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 PIP4K2AP48426 406 aaPredicted RBP12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 LARGE2Q8N3Y3 721 aa12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 CSRNP1Q96S65 589 aa12.19□□□□□ -0.46
TRAPPC9-212ENST00000521944 SHTN1A0MZ66 631 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 CXCL9Q07325 125 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 CRY2Q49AN0 593 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 CLEC4GQ6UXB4 293 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 TRPM4Q8TD43 1214 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 KIAA0100Q14667 2235 aaKnown RBP12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 COL6A3P12111 3177 aa12.18□□□□□ -0.46
TRAPPC9-212ENST00000521944 GMPSP49915 693 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 RGMBQ6NW40 437 aa12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 CDC37L1Q7L3B6 337 aa12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 USP48Q86UV5 1035 aa12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 ZC3H15Q8WU90 426 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 NPC1L1Q9UHC9 1359 aa12.17□□□□□ -0.46
TRAPPC9-212ENST00000521944 KCNQ3O43525 872 aa12.16□□□□□ -0.46
TRAPPC9-212ENST00000521944 IL17REQ8NFR9 667 aa12.16□□□□□ -0.46
TRAPPC9-212ENST00000521944 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-212ENST00000521944 USP16Q9Y5T5 823 aa12.16□□□□□ -0.46
TRAPPC9-212ENST00000521944 PRAMEF22A3QJZ6 481 aa12.15□□□□□ -0.46
TRAPPC9-212ENST00000521944 FAM177BA6PVY3 158 aa12.15□□□□□ -0.46
TRAPPC9-212ENST00000521944 CC2D2BQ6DHV5 1058 aa12.15□□□□□ -0.46
TRAPPC9-212ENST00000521944 TTC5Q8N0Z6 440 aa12.15□□□□□ -0.46
TRAPPC9-212ENST00000521944 NIP7Q9Y221 180 aaKnown RBP eCLIP12.15□□□□□ -0.46
TRAPPC9-212ENST00000521944 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
TRAPPC9-212ENST00000521944 HOXA10P31260 410 aaPredicted RBP12.14□□□□□ -0.47
TRAPPC9-212ENST00000521944 AOC3Q16853 763 aa12.14□□□□□ -0.47
TRAPPC9-212ENST00000521944 NIM1KQ8IY84 436 aa12.14□□□□□ -0.47
TRAPPC9-212ENST00000521944 POLR2AP24928 1970 aaKnown RBP12.14□□□□□ -0.47
TRAPPC9-212ENST00000521944 AKAP11Q9UKA4 1901 aa12.13□□□□□ -0.47
TRAPPC9-212ENST00000521944 DLL1O00548 723 aa12.13□□□□□ -0.47
TRAPPC9-212ENST00000521944 HMOX1P09601 288 aa12.13□□□□□ -0.47
TRAPPC9-212ENST00000521944 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
TRAPPC9-212ENST00000521944 HLFQ16534 295 aa12.13□□□□□ -0.47
TRAPPC9-212ENST00000521944 CCDC102AQ96A19 550 aa12.13□□□□□ -0.47
TRAPPC9-212ENST00000521944 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 SNPHO15079 494 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 EGFRP00533 1210 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 SLC10A3P09131 477 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 ZNF157P51786 506 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 NUTM1Q86Y26 1132 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 ZNF296Q8WUU4 475 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
TRAPPC9-212ENST00000521944 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-212ENST00000521944 FMNL2Q96PY5 1086 aa12.11□□□□□ -0.47
TRAPPC9-212ENST00000521944 CNOT7Q9UIV1 285 aaKnown RBP12.11□□□□□ -0.47
TRAPPC9-212ENST00000521944 YDJCA8MPS7 323 aa12.1□□□□□ -0.47
TRAPPC9-212ENST00000521944 RAD17O75943 681 aa12.1□□□□□ -0.47
TRAPPC9-212ENST00000521944 GRIPAP1Q4V328 841 aa12.1□□□□□ -0.47
TRAPPC9-212ENST00000521944 SAMD7Q7Z3H4 446 aa12.1□□□□□ -0.47
TRAPPC9-212ENST00000521944 TMC2Q8TDI7 906 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms