RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-216ENST00000521918 IRF5Q13568 498 aa8.16□□□□□ -1.1
SPIDR-216ENST00000521918 ARMC2Q8NEN0 867 aa8.16□□□□□ -1.1
SPIDR-216ENST00000521918 CAMKK2Q96RR4 588 aa8.16□□□□□ -1.1
SPIDR-216ENST00000521918 NLRP2Q9NX02 1062 aa8.16□□□□□ -1.1
SPIDR-216ENST00000521918 ZC3H4Q9UPT8 1303 aaKnown RBP8.16□□□□□ -1.1
SPIDR-216ENST00000521918 EMILIN1Q9Y6C2 1016 aa8.16□□□□□ -1.1
SPIDR-216ENST00000521918 PARD3Q8TEW0 1356 aa8.15□□□□□ -1.1
SPIDR-216ENST00000521918 IL2RBP14784 551 aa8.15□□□□□ -1.1
SPIDR-216ENST00000521918 BAG6P46379 1132 aa8.15□□□□□ -1.1
SPIDR-216ENST00000521918 SKOR1P84550 965 aa8.15□□□□□ -1.1
SPIDR-216ENST00000521918 SF3B2Q13435 895 aaKnown RBP8.15□□□□□ -1.1
SPIDR-216ENST00000521918 ZNF511Q8NB15 262 aa8.15□□□□□ -1.1
SPIDR-216ENST00000521918 GPKOWQ92917 476 aaPredicted RBP eCLIP8.15□□□□□ -1.1
SPIDR-216ENST00000521918 PANK3Q9H999 370 aa8.15□□□□□ -1.1
SPIDR-216ENST00000521918 A6NJR5 290 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 AMPHP49418 695 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 SH3BP2P78314 561 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 LINC01559Q495D7 138 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 HSP90AB2PQ58FF8 381 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 NBPF14Q5TI25 921 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 NBPF6Q5VWK0 638 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 SPRYD7Q5W111 196 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 SH3BP5LQ7L8J4 393 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 PTF1AQ7RTS3 328 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 NBPF4Q96M43 638 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 OCSTAMPQ9BR26 566 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 MAP2P11137 1827 aaKnown RBP8.14□□□□□ -1.11
SPIDR-216ENST00000521918 PKD1L3Q7Z443 1732 aa8.14□□□□□ -1.11
SPIDR-216ENST00000521918 WASHC2AQ641Q2 1341 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 EXOC5O00471 708 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 ABL2P42684 1182 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 EZH2Q15910 746 aaKnown RBP8.13□□□□□ -1.11
SPIDR-216ENST00000521918 PDXDC2PQ6P474 469 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 SH3RF1Q7Z6J0 888 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 LTV1Q96GA3 475 aaPredicted RBP8.13□□□□□ -1.11
SPIDR-216ENST00000521918 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 PRM3Q9NNZ6 103 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 POLKQ9UBT6 870 aa8.13□□□□□ -1.11
SPIDR-216ENST00000521918 LRP5O75197 1615 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 PAPPAQ13219 1627 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 RAD21O60216 631 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 CD2BP2O95400 341 aaKnown RBP8.12□□□□□ -1.11
SPIDR-216ENST00000521918 APBA3O96018 575 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 WNT7BP56706 349 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 ZNF598Q86UK7 904 aaKnown RBP8.12□□□□□ -1.11
SPIDR-216ENST00000521918 PNMA1Q8ND90 353 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 FOXJ1Q92949 421 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 ARXQ96QS3 562 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 BTAF1O14981 1849 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 DOT1LQ8TEK3 1739 aa8.12□□□□□ -1.11
SPIDR-216ENST00000521918 PLEKHG2Q9H7P9 1386 aa8.11□□□□□ -1.11
SPIDR-216ENST00000521918 ZNF697Q5TEC3 545 aa8.11□□□□□ -1.11
SPIDR-216ENST00000521918 USHBP1Q8N6Y0 703 aa8.11□□□□□ -1.11
SPIDR-216ENST00000521918 GPSM3Q9Y4H4 160 aa8.11□□□□□ -1.11
SPIDR-216ENST00000521918 TOGARAM1Q9Y4F4 1720 aa8.11□□□□□ -1.11
SPIDR-216ENST00000521918 NPC1L1Q9UHC9 1359 aa8.1□□□□□ -1.11
SPIDR-216ENST00000521918 PLSCR1O15162 318 aa8.1□□□□□ -1.11
SPIDR-216ENST00000521918 KCNQ2O43526 872 aa8.1□□□□□ -1.11
SPIDR-216ENST00000521918 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
SPIDR-216ENST00000521918 IGSF1Q8N6C5 1336 aa8.09□□□□□ -1.11
SPIDR-216ENST00000521918 ZBBXA8MT70 800 aa8.09□□□□□ -1.11
SPIDR-216ENST00000521918 EIF4A2Q14240 407 aaKnown RBP8.09□□□□□ -1.11
SPIDR-216ENST00000521918 BPHLQ86WA6 291 aaPredicted RBP8.09□□□□□ -1.11
SPIDR-216ENST00000521918 KNSTRNQ9Y448 316 aa8.09□□□□□ -1.11
SPIDR-216ENST00000521918 CASZ1Q86V15 1759 aa8.09□□□□□ -1.11
SPIDR-216ENST00000521918 COL3A1P02461 1466 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-216ENST00000521918 TNNT2P45379 298 aaPredicted RBP8.08□□□□□ -1.12
SPIDR-216ENST00000521918 PTK2Q05397 1052 aa8.08□□□□□ -1.12
SPIDR-216ENST00000521918 RC3H1Q5TC82 1133 aaKnown RBP8.08□□□□□ -1.12
SPIDR-216ENST00000521918 ZCRB1Q8TBF4 217 aaKnown RBP8.08□□□□□ -1.12
SPIDR-216ENST00000521918 ACSBG1Q96GR2 724 aa8.08□□□□□ -1.12
SPIDR-216ENST00000521918 ARHGAP9Q9BRR9 750 aa8.08□□□□□ -1.12
SPIDR-216ENST00000521918 C1QTNF2Q9BXJ5 285 aa8.08□□□□□ -1.12
SPIDR-216ENST00000521918 PCDH11XQ9BZA7 1347 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 PCDH11YQ9BZA8 1340 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 LY75O60449 1722 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 WNT7AO00755 349 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 PPM1GO15355 546 aaPredicted RBP8.07□□□□□ -1.12
SPIDR-216ENST00000521918 CYP27B1O15528 508 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 VAC14Q08AM6 782 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 NR1H3Q13133 447 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 R3HDM1Q15032 1099 aaKnown RBP8.07□□□□□ -1.12
SPIDR-216ENST00000521918 TRIM67Q6ZTA4 783 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 ERICH6Q7L0X2 663 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 MORC1Q86VD1 984 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 RAPGEF4Q8WZA2 1011 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 PKD2L1Q9P0L9 805 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 KDRP35968 1356 aa8.07□□□□□ -1.12
SPIDR-216ENST00000521918 TRAK2O60296 914 aa8.06□□□□□ -1.12
SPIDR-216ENST00000521918 GDF9O60383 454 aa8.06□□□□□ -1.12
SPIDR-216ENST00000521918 TATP17735 454 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-216ENST00000521918 TXNRD1Q16881 649 aa8.06□□□□□ -1.12
SPIDR-216ENST00000521918 ERFEQ4G0M1 354 aa8.06□□□□□ -1.12
SPIDR-216ENST00000521918 ADAM32Q8TC27 787 aa8.06□□□□□ -1.12
SPIDR-216ENST00000521918 DDX54Q8TDD1 881 aaKnown RBP8.06□□□□□ -1.12
SPIDR-216ENST00000521918 MAGEB6P1A0A0J9YX57 407 aa8.05□□□□□ -1.12
SPIDR-216ENST00000521918 SIAH2O43255 324 aa8.05□□□□□ -1.12
SPIDR-216ENST00000521918 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 245.3 ms