RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 SMC3Q9UQE7 1217 aa15.97■□□□□ 0.15
NEFM-205ENST00000521540 CYP27B1O15528 508 aa15.96■□□□□ 0.15
NEFM-205ENST00000521540 PTH1RQ03431 593 aa15.96■□□□□ 0.15
NEFM-205ENST00000521540 RABL6Q3YEC7 729 aaPredicted RBP15.96■□□□□ 0.15
NEFM-205ENST00000521540 HS1BP3Q53T59 392 aa15.96■□□□□ 0.15
NEFM-205ENST00000521540 ALDH8A1Q9H2A2 487 aaPredicted RBP15.96■□□□□ 0.15
NEFM-205ENST00000521540 EXOC5O00471 708 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 ZSCAN22P10073 491 aaPredicted RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 CSPP1Q1MSJ5 1256 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 PRPF40BQ6NWY9 871 aaKnown RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 TICAM2Q86XR7 235 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 PLBD2Q8NHP8 589 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 JAKMIP1Q96N16 626 aaKnown RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 RPAP1Q9BWH6 1393 aaPredicted RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 CCDC8Q9H0W5 538 aaPredicted RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 ATP5JP18859 108 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 FOXD4L5Q5VV16 416 aaPredicted RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 FOXD4L4Q8WXT5 416 aaPredicted RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 TMEM63CQ9P1W3 806 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 RBM8AQ9Y5S9 174 aaKnown RBP15.95■□□□□ 0.14
NEFM-205ENST00000521540 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
NEFM-205ENST00000521540 STX6O43752 255 aa15.94■□□□□ 0.14
NEFM-205ENST00000521540 KCNJ4P48050 445 aa15.94■□□□□ 0.14
NEFM-205ENST00000521540 NMIQ13287 307 aaPredicted RBP15.94■□□□□ 0.14
NEFM-205ENST00000521540 CREB3L3Q68CJ9 461 aa15.94■□□□□ 0.14
NEFM-205ENST00000521540 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
NEFM-205ENST00000521540 RFX5P48382 616 aaPredicted RBP15.93■□□□□ 0.14
NEFM-205ENST00000521540 RBM27Q9P2N5 1060 aaKnown RBP15.93■□□□□ 0.14
NEFM-205ENST00000521540 MED23Q9ULK4 1368 aa15.93■□□□□ 0.14
NEFM-205ENST00000521540 LETM1O95202 739 aaPredicted RBP15.93■□□□□ 0.14
NEFM-205ENST00000521540 PRIM1P49642 420 aaKnown RBP15.93■□□□□ 0.14
NEFM-205ENST00000521540 SIL1Q9H173 461 aa15.93■□□□□ 0.14
NEFM-205ENST00000521540 RBSNQ9H1K0 784 aa15.93■□□□□ 0.14
NEFM-205ENST00000521540 ERVV-2B6SEH9 535 aa15.92■□□□□ 0.14
NEFM-205ENST00000521540 SYT1P21579 422 aa15.92■□□□□ 0.14
NEFM-205ENST00000521540 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
NEFM-205ENST00000521540 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
NEFM-205ENST00000521540 TSGA10IPQ3SY00 556 aa15.92■□□□□ 0.14
NEFM-205ENST00000521540 EPHA10Q5JZY3 1008 aa15.92■□□□□ 0.14
NEFM-205ENST00000521540 MARCH10Q8NA82 808 aaPredicted RBP15.92■□□□□ 0.14
NEFM-205ENST00000521540 BOLA2Q9H3K6 86 aa15.92■□□□□ 0.14
NEFM-205ENST00000521540 UBR2Q8IWV8 1755 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 SLC27A2O14975 620 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 F13A1P00488 732 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 KRT32Q14532 448 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 TNNI3KQ59H18 835 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 KRT27Q7Z3Y8 459 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 FPGT-TNNI3KV9GXZ4 949 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 PDLIM2Q96JY6 352 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 FAM227BQ96M60 508 aa15.91■□□□□ 0.14
NEFM-205ENST00000521540 TLR7Q9NYK1 1049 aaKnown RBP15.91■□□□□ 0.14
NEFM-205ENST00000521540 A0A087WZG4 1122 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 SYCE3A1L190 88 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 ADCK5Q3MIX3 580 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 DDX54Q8TDD1 881 aaKnown RBP15.9■□□□□ 0.14
NEFM-205ENST00000521540 TSPY26PQ9H489 355 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 GPR108Q9NPR9 543 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 NSFL1CQ9UNZ2 370 aaKnown RBP15.9■□□□□ 0.14
NEFM-205ENST00000521540 BCL9O00512 1426 aa15.9■□□□□ 0.14
NEFM-205ENST00000521540 PAPPAQ13219 1627 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 CASP7P55210 303 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 UBE2HP62256 183 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 BLOC1S2Q6QNY1 142 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 UBE3BQ7Z3V4 1068 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 TCHHQ07283 1943 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 NUP188Q5SRE5 1749 aa15.89■□□□□ 0.13
NEFM-205ENST00000521540 H7C1W4 665 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 PDCP20941 246 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 GJB2P29033 226 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 USPL1Q5W0Q7 1092 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 CCDC83Q8IWF9 413 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 FAM184AQ8NB25 1140 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.88■□□□□ 0.13
NEFM-205ENST00000521540 TOGARAM1Q9Y4F4 1720 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 A0A0D9SFI3 127 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 TFCP2Q12800 502 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 CCDC183Q5T5S1 534 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 KLHDC4Q8TBB5 520 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 CHAMP1Q96JM3 812 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 DOT1LQ8TEK3 1739 aa15.88■□□□□ 0.13
NEFM-205ENST00000521540 UVSSAQ2YD98 709 aa15.87■□□□□ 0.13
NEFM-205ENST00000521540 HAUS7Q99871 368 aa15.87■□□□□ 0.13
NEFM-205ENST00000521540 CWC25Q9NXE8 425 aaPredicted RBP15.87■□□□□ 0.13
NEFM-205ENST00000521540 DBNLQ9UJU6 430 aaKnown RBP15.87■□□□□ 0.13
NEFM-205ENST00000521540 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
NEFM-205ENST00000521540 TAF5LO75529 589 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 CPA1P15085 419 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 RPS6KB1P23443 525 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 SBF2Q86WG5 1849 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 LARGE1O95461 756 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 ME3Q16798 604 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 CCDC191Q8NCU4 936 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 ATG3Q9NT62 314 aa15.86■□□□□ 0.13
NEFM-205ENST00000521540 GADD45BO75293 160 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms