RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 SSH1Q8WYL5 1049 aa26.3■■□□□ 1.8
TRIM35-203ENST00000521253 H7C1W4 665 aa26.29■■□□□ 1.8
TRIM35-203ENST00000521253 HNRNPUQ00839 825 aaKnown RBP eCLIP26.29■■□□□ 1.8
TRIM35-203ENST00000521253 CELF1Q92879 486 aaKnown RBP26.29■■□□□ 1.8
TRIM35-203ENST00000521253 TMX4Q9H1E5 349 aaPredicted RBP26.29■■□□□ 1.8
TRIM35-203ENST00000521253 NMRK2Q9NPI5 230 aa26.29■■□□□ 1.8
TRIM35-203ENST00000521253 BEND3Q5T5X7 828 aa26.28■■□□□ 1.8
TRIM35-203ENST00000521253 UBE3BQ7Z3V4 1068 aa26.28■■□□□ 1.8
TRIM35-203ENST00000521253 SP8Q8IXZ3 490 aa26.28■■□□□ 1.8
TRIM35-203ENST00000521253 KDM2BQ8NHM5 1336 aa26.28■■□□□ 1.8
TRIM35-203ENST00000521253 CCDC88AQ3V6T2 1871 aa26.28■■□□□ 1.8
TRIM35-203ENST00000521253 KIF3CO14782 793 aa26.27■■□□□ 1.8
TRIM35-203ENST00000521253 IARSP41252 1262 aaKnown RBP26.27■■□□□ 1.8
TRIM35-203ENST00000521253 CCDC152Q4G0S7 254 aa26.27■■□□□ 1.8
TRIM35-203ENST00000521253 BCL2L13Q9BXK5 485 aa26.27■■□□□ 1.8
TRIM35-203ENST00000521253 TIAM2Q8IVF5 1701 aa26.27■■□□□ 1.8
TRIM35-203ENST00000521253 GLTPD2A6NH11 291 aa26.26■■□□□ 1.79
TRIM35-203ENST00000521253 TMC4Q7Z404 712 aa26.26■■□□□ 1.79
TRIM35-203ENST00000521253 CCDC85AQ96PX6 553 aaPredicted RBP26.26■■□□□ 1.79
TRIM35-203ENST00000521253 SEC31BQ9NQW1 1179 aa26.26■■□□□ 1.79
TRIM35-203ENST00000521253 CT47B1P0C2W7 299 aaPredicted RBP26.25■■□□□ 1.79
TRIM35-203ENST00000521253 CASP7P55210 303 aa26.25■■□□□ 1.79
TRIM35-203ENST00000521253 ALDH1L2Q3SY69 923 aa26.25■■□□□ 1.79
TRIM35-203ENST00000521253 COL4A1P02462 1669 aa26.25■■□□□ 1.79
TRIM35-203ENST00000521253 TAF1P21675 1872 aa26.24■■□□□ 1.79
TRIM35-203ENST00000521253 CTSWP56202 376 aa26.24■■□□□ 1.79
TRIM35-203ENST00000521253 DICER1Q9UPY3 1922 aaKnown RBP26.24■■□□□ 1.79
TRIM35-203ENST00000521253 C1QTNF8P60827 252 aa26.23■■□□□ 1.79
TRIM35-203ENST00000521253 RPS8P62241 208 aaKnown RBP26.23■■□□□ 1.79
TRIM35-203ENST00000521253 SLC4A10Q6U841 1118 aa26.23■■□□□ 1.79
TRIM35-203ENST00000521253 DPP8Q6V1X1 898 aaPredicted RBP26.23■■□□□ 1.79
TRIM35-203ENST00000521253 PTPRCP08575 1304 aa26.22■■□□□ 1.79
TRIM35-203ENST00000521253 DPY19L2Q6NUT2 758 aa26.22■■□□□ 1.79
TRIM35-203ENST00000521253 MPNDQ8N594 471 aa26.22■■□□□ 1.79
TRIM35-203ENST00000521253 TTLL11Q8NHH1 800 aa26.22■■□□□ 1.79
TRIM35-203ENST00000521253 RTFDC1Q9BY42 306 aaPredicted RBP26.22■■□□□ 1.79
TRIM35-203ENST00000521253 SMC4Q9NTJ3 1288 aa26.22■■□□□ 1.79
TRIM35-203ENST00000521253 PLA2G12BQ9BX93 195 aa26.21■■□□□ 1.79
TRIM35-203ENST00000521253 RRAGCQ9HB90 399 aa26.21■■□□□ 1.79
TRIM35-203ENST00000521253 SRCIN1Q9C0H9 1055 aa26.2■■□□□ 1.78
TRIM35-203ENST00000521253 GREM2Q9H772 168 aa26.2■■□□□ 1.78
TRIM35-203ENST00000521253 ALDH1L1O75891 902 aa26.19■■□□□ 1.78
TRIM35-203ENST00000521253 LARGE2Q8N3Y3 721 aa26.19■■□□□ 1.78
TRIM35-203ENST00000521253 SUPT20HQ8NEM7 779 aa26.19■■□□□ 1.78
TRIM35-203ENST00000521253 COL4A5P29400 1685 aa26.19■■□□□ 1.78
TRIM35-203ENST00000521253 FZD9O00144 591 aa26.18■■□□□ 1.78
TRIM35-203ENST00000521253 PPIP5K2O43314 1243 aa26.18■■□□□ 1.78
TRIM35-203ENST00000521253 JDP2Q8WYK2 163 aa26.18■■□□□ 1.78
TRIM35-203ENST00000521253 ZNF541Q9H0D2 1346 aa26.17■■□□□ 1.78
TRIM35-203ENST00000521253 LRRC37AA6NMS7 1700 aa26.17■■□□□ 1.78
TRIM35-203ENST00000521253 GRM8O00222 908 aa26.17■■□□□ 1.78
TRIM35-203ENST00000521253 DDNO94850 711 aaPredicted RBP26.17■■□□□ 1.78
TRIM35-203ENST00000521253 AOC3Q16853 763 aa26.17■■□□□ 1.78
TRIM35-203ENST00000521253 NSFL1CQ9UNZ2 370 aaKnown RBP26.17■■□□□ 1.78
TRIM35-203ENST00000521253 RTL9Q8NET4 1388 aa26.17■■□□□ 1.78
TRIM35-203ENST00000521253 GPSM2P81274 684 aa26.16■■□□□ 1.78
TRIM35-203ENST00000521253 ANKRD18AQ8IVF6 992 aa26.16■■□□□ 1.78
TRIM35-203ENST00000521253 CDC5LQ99459 802 aaKnown RBP26.16■■□□□ 1.78
TRIM35-203ENST00000521253 VPS33BQ9H267 617 aa26.16■■□□□ 1.78
TRIM35-203ENST00000521253 CSF1RP07333 972 aa26.15■■□□□ 1.78
TRIM35-203ENST00000521253 RARSP54136 660 aaKnown RBP26.15■■□□□ 1.78
TRIM35-203ENST00000521253 C9orf78Q9NZ63 289 aaPredicted RBP26.15■■□□□ 1.78
TRIM35-203ENST00000521253 DUOX1Q9NRD9 1551 aa26.15■■□□□ 1.78
TRIM35-203ENST00000521253 POTECB2RU33 542 aa26.14■■□□□ 1.78
TRIM35-203ENST00000521253 TOMM70O94826 608 aa26.14■■□□□ 1.78
TRIM35-203ENST00000521253 VEGFAP15692 232 aaPredicted RBP26.14■■□□□ 1.78
TRIM35-203ENST00000521253 FAM161AQ3B820 660 aa26.14■■□□□ 1.78
TRIM35-203ENST00000521253 ZBED9Q6R2W3 1325 aa26.14■■□□□ 1.77
TRIM35-203ENST00000521253 BRPF1P55201 1214 aaPredicted RBP26.13■■□□□ 1.77
TRIM35-203ENST00000521253 FOXO4P98177 505 aa26.13■■□□□ 1.77
TRIM35-203ENST00000521253 KIAA2012Q0VF49 1180 aa26.13■■□□□ 1.77
TRIM35-203ENST00000521253 NIM1KQ8IY84 436 aa26.13■■□□□ 1.77
TRIM35-203ENST00000521253 NOB1Q9ULX3 412 aaKnown RBP26.13■■□□□ 1.77
TRIM35-203ENST00000521253 C16orf71Q8IYS4 520 aaPredicted RBP26.12■■□□□ 1.77
TRIM35-203ENST00000521253 POLLQ9UGP5 575 aa26.12■■□□□ 1.77
TRIM35-203ENST00000521253 WDR90Q96KV7 1748 aa26.11■■□□□ 1.77
TRIM35-203ENST00000521253 ITGA6P23229 1130 aa26.11■■□□□ 1.77
TRIM35-203ENST00000521253 EPHA10Q5JZY3 1008 aa26.11■■□□□ 1.77
TRIM35-203ENST00000521253 PODXL2Q9NZ53 605 aa26.11■■□□□ 1.77
TRIM35-203ENST00000521253 MYH3P11055 1940 aa26.11■■□□□ 1.77
TRIM35-203ENST00000521253 C6orf229H3BNL8 230 aa26.1■■□□□ 1.77
TRIM35-203ENST00000521253 NBPF7P0C2Y1 421 aaPredicted RBP26.1■■□□□ 1.77
TRIM35-203ENST00000521253 EIF6P56537 245 aaKnown RBP26.1■■□□□ 1.77
TRIM35-203ENST00000521253 TBC1D16Q8TBP0 767 aa26.1■■□□□ 1.77
TRIM35-203ENST00000521253 L3MBTL3Q96JM7 780 aaPredicted RBP26.1■■□□□ 1.77
TRIM35-203ENST00000521253 BSDC1Q9NW68 430 aaPredicted RBP26.1■■□□□ 1.77
TRIM35-203ENST00000521253 ANKIB1Q9P2G1 1089 aa26.1■■□□□ 1.77
TRIM35-203ENST00000521253 WASHC4Q2M389 1173 aa26.09■■□□□ 1.77
TRIM35-203ENST00000521253 GPC2Q8N158 579 aa26.09■■□□□ 1.77
TRIM35-203ENST00000521253 ZNRF3Q9ULT6 936 aa26.09■■□□□ 1.77
TRIM35-203ENST00000521253 UTYO14607 1347 aa26.09■■□□□ 1.77
TRIM35-203ENST00000521253 LTBP1Q14766 1721 aa26.08■■□□□ 1.77
TRIM35-203ENST00000521253 IGHMBP2P38935 993 aaKnown RBP26.08■■□□□ 1.77
TRIM35-203ENST00000521253 LMBR1LQ6UX01 489 aa26.08■■□□□ 1.77
TRIM35-203ENST00000521253 RBM46Q8TBY0 533 aaKnown RBP26.08■■□□□ 1.77
TRIM35-203ENST00000521253 SUCLG2Q96I99 432 aa26.08■■□□□ 1.77
TRIM35-203ENST00000521253 GPR101Q96P66 508 aaPredicted RBP26.08■■□□□ 1.77
TRIM35-203ENST00000521253 UFL1O94874 794 aa26.07■■□□□ 1.76
TRIM35-203ENST00000521253 API5Q9BZZ5 524 aaKnown RBP26.07■■□□□ 1.76
TRIM35-203ENST00000521253 GGA1Q9UJY5 639 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms