RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 IRS4O14654 1257 aaPredicted RBP20.79■□□□□ 0.92
IGHV3-42-201ENST00000520410 COL4A5P29400 1685 aa20.78■□□□□ 0.92
IGHV3-42-201ENST00000520410 PNMA8AQ86V59 439 aaPredicted RBP20.78■□□□□ 0.92
IGHV3-42-201ENST00000520410 SP8Q8IXZ3 490 aa20.78■□□□□ 0.92
IGHV3-42-201ENST00000520410 TSPYL6Q8N831 410 aa20.77■□□□□ 0.92
IGHV3-42-201ENST00000520410 DDX60Q8IY21 1712 aaKnown RBP20.76■□□□□ 0.91
IGHV3-42-201ENST00000520410 MKRN1Q9UHC7 482 aaKnown RBP20.76■□□□□ 0.91
IGHV3-42-201ENST00000520410 CEP350Q5VT06 3117 aa20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 HSP90B1P14625 803 aaKnown RBP20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 TWISTNBQ3B726 338 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 MAP1SQ66K74 1059 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 TMC4Q7Z404 712 aa20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 JARID2Q92833 1246 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 CCDC85AQ96PX6 553 aaPredicted RBP20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 NSFL1CQ9UNZ2 370 aaKnown RBP20.75■□□□□ 0.91
IGHV3-42-201ENST00000520410 C6orf229H3BNL8 230 aa20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 FAM9BQ8IZU0 186 aa20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 ZBTB38Q8NAP3 1195 aaPredicted RBP20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 CELF1Q92879 486 aaKnown RBP20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 BCL2L13Q9BXK5 485 aa20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 CWC25Q9NXE8 425 aaPredicted RBP20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 MAP3K2Q9Y2U5 619 aa20.74■□□□□ 0.91
IGHV3-42-201ENST00000520410 NEXNQ0ZGT2 675 aa20.73■□□□□ 0.91
IGHV3-42-201ENST00000520410 CREBZFQ9NS37 354 aa20.73■□□□□ 0.91
IGHV3-42-201ENST00000520410 ZNRF3Q9ULT6 936 aa20.73■□□□□ 0.91
IGHV3-42-201ENST00000520410 RIMBP2O15034 1052 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 RAD17O75943 681 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 EPS15P42566 896 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 SF3B3Q15393 1217 aaKnown RBP20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 CCDC27Q2M243 656 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 CCDC191Q8NCU4 936 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 METTL22Q9BUU2 404 aaPredicted RBP20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 VPS33BQ9H267 617 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 TAF1P21675 1872 aa20.72■□□□□ 0.91
IGHV3-42-201ENST00000520410 G3V3G9 751 aa20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 SCNN1DP51172 638 aa20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 KIAA2012Q0VF49 1180 aa20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 DCAF8Q5TAQ9 597 aa20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 CIAPIN1Q6FI81 312 aa20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 CNTROBQ8N137 903 aa20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 RTFDC1Q9BY42 306 aaPredicted RBP20.71■□□□□ 0.91
IGHV3-42-201ENST00000520410 PI4KAP2A4QPH2 592 aa20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 CXCL9Q07325 125 aa20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 TRIM28Q13263 835 aaKnown RBP20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 WASHC4Q2M389 1173 aa20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 CCDC152Q4G0S7 254 aa20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 PI4KAP1Q8N8J0 262 aa20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 JMYQ8N9B5 988 aa20.7■□□□□ 0.9
IGHV3-42-201ENST00000520410 TMEM88BA6NKF7 163 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 SLC4A2P04920 1241 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 PCCAP05165 728 aaPredicted RBP20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 GMPSP49915 693 aaPredicted RBP20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 GPSM2P81274 684 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 TNIP1Q15025 636 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 KSR2Q6VAB6 950 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 DBNDD1Q9H9R9 158 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 SEC31BQ9NQW1 1179 aa20.69■□□□□ 0.9
IGHV3-42-201ENST00000520410 PDE8AO60658 829 aa20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 RPS8P62241 208 aaKnown RBP20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 PAXIP1Q6ZW49 1069 aaPredicted RBP20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 GPR101Q96P66 508 aaPredicted RBP20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 EYA3Q99504 573 aa20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 ANKIB1Q9P2G1 1089 aa20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 ABT1Q9ULW3 272 aaKnown RBP20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 IL16Q14005 1332 aa20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 PASKQ96RG2 1323 aa20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
IGHV3-42-201ENST00000520410 LTBP1Q14766 1721 aa20.67■□□□□ 0.9
IGHV3-42-201ENST00000520410 HSPA1AP0DMV8 641 aaKnown RBP20.67■□□□□ 0.9
IGHV3-42-201ENST00000520410 HSPA1BP0DMV9 641 aaKnown RBP20.67■□□□□ 0.9
IGHV3-42-201ENST00000520410 USP50Q70EL3 339 aaPredicted RBP20.67■□□□□ 0.9
IGHV3-42-201ENST00000520410 ADARB2Q9NS39 739 aaKnown RBP20.67■□□□□ 0.9
IGHV3-42-201ENST00000520410 FKBP5Q13451 457 aaPredicted RBP20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 DOK7Q18PE1 504 aa20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 CWF19L2Q2TBE0 894 aaKnown RBP20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 IFFO2Q5TF58 517 aa20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 G2E3Q7L622 706 aa20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 GPRC5DQ9NZD1 345 aa20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 LRRC37AA6NMS7 1700 aa20.66■□□□□ 0.9
IGHV3-42-201ENST00000520410 ADAMTSL1Q8N6G6 1762 aa20.65■□□□□ 0.9
IGHV3-42-201ENST00000520410 DUOX1Q9NRD9 1551 aa20.65■□□□□ 0.9
IGHV3-42-201ENST00000520410 UFL1O94874 794 aa20.65■□□□□ 0.9
IGHV3-42-201ENST00000520410 ITGBL1O95965 494 aaPredicted RBP20.65■□□□□ 0.9
IGHV3-42-201ENST00000520410 ANKRD18AQ8IVF6 992 aa20.65■□□□□ 0.9
IGHV3-42-201ENST00000520410 COL4A1P02462 1669 aa20.64■□□□□ 0.9
IGHV3-42-201ENST00000520410 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.89
IGHV3-42-201ENST00000520410 GRM1Q13255 1194 aa20.64■□□□□ 0.89
IGHV3-42-201ENST00000520410 ZC3H12CQ9C0D7 883 aaKnown RBP20.64■□□□□ 0.89
IGHV3-42-201ENST00000520410 CNTNAP1P78357 1384 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 ECE2O60344 883 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 CTSWP56202 376 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 FLIIQ13045 1269 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 WDR63Q8IWG1 891 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 POLLQ9UGP5 575 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 GGA1Q9UJY5 639 aa20.63■□□□□ 0.89
IGHV3-42-201ENST00000520410 CDHR2Q9BYE9 1310 aa20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 YDJCA8MPS7 323 aa20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 H7C1D1 291 aa20.62■□□□□ 0.89
IGHV3-42-201ENST00000520410 IGKV5-2P06315 115 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms