RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 TAF5LO75529 589 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 SNRPA1P09661 255 aaKnown RBP13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 SLC39A6Q13433 755 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 USPL1Q5W0Q7 1092 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 TTC6Q86TZ1 520 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 NEK1Q96PY6 1258 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 JCADQ9P266 1359 aa13.44□□□□□ -0.26
NUDCD1-203ENST00000519607 AFDNP55196 1824 aaKnown RBP13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 TOB2Q14106 344 aaPredicted RBP13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 TNNI3KQ59H18 835 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 IFNL2Q8IZJ0 200 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 KLHDC4Q8TBB5 520 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 TNMDQ9H2S6 317 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 DDX19AQ9NUU7 478 aaKnown RBP13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 FPGT-TNNI3KV9GXZ4 949 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 C5P01031 1676 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 KIF1AQ12756 1690 aa13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 ZNF830Q96NB3 372 aaPredicted RBP13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 TTC12Q9H892 705 aaPredicted RBP13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 TRPM3Q9HCF6 1732 aaPredicted RBP13.43□□□□□ -0.26
NUDCD1-203ENST00000519607 PHKG2P15735 406 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 ZNF589Q86UQ0 364 aaPredicted RBP13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 H3BQV1 296 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 HMGB1P09429 215 aaKnown RBP13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 HSP90B1P14625 803 aaKnown RBP13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 FGD1P98174 961 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 STK3Q13188 491 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 IFFO2Q5TF58 517 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 TCEANC2Q96MN5 208 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 FMNL2Q96PY5 1086 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 ZSCAN16Q9H4T2 348 aaPredicted RBP13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 CHMP3Q9Y3E7 222 aa13.42□□□□□ -0.26
NUDCD1-203ENST00000519607 COL15A1P39059 1388 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 ZC3H6P61129 1189 aaKnown RBP13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 PTPN12Q05209 780 aaKnown RBP13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 TFCP2Q12800 502 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 EPHA10Q5JZY3 1008 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 MPNDQ8N594 471 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 ZNF496Q96IT1 587 aaPredicted RBP13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 DCAF5Q96JK2 942 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 DBNLQ9UJU6 430 aaKnown RBP13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 CFAP45Q9UL16 551 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 KIF3AQ9Y496 699 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 TYRO3Q06418 890 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 RABL6Q3YEC7 729 aaPredicted RBP13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 UBE3BQ7Z3V4 1068 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 TICAM2Q86XR7 235 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 GTF3C6Q969F1 213 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 SPTLC3Q9NUV7 552 aa13.41□□□□□ -0.26
NUDCD1-203ENST00000519607 PLEKHG2Q9H7P9 1386 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 DTNBO60941 627 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 CAVIN2O95810 425 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 CAMK4Q16566 473 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 CHMP4CQ96CF2 233 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 HAUS7Q99871 368 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 DACT1Q9NYF0 836 aa13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
NUDCD1-203ENST00000519607 A0A087WZG4 1122 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 CSB-PGBD3P0DP91 1061 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 LIG1P18858 919 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 PROSER2Q86WR7 435 aaPredicted RBP13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 VSIG10Q8N0Z9 540 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 BICD2Q8TD16 824 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 LEO1Q8WVC0 666 aaPredicted RBP13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 FAM173BQ6P4H8 233 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 Q6ZUG5 572 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 LLPHQ9BRT6 129 aaKnown RBP13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 MST1RQ04912 1400 aa13.39□□□□□ -0.27
NUDCD1-203ENST00000519607 PLBD2Q8NHP8 589 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 EDC3Q96F86 508 aaKnown RBP13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 MRVI1Q9Y6F6 885 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 KBTBD3Q8NAB2 608 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 CLSTN2Q9H4D0 955 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 C19orf44Q9H6X5 657 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 TAF6LQ9Y6J9 622 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 ARFGEF2Q9Y6D5 1785 aa13.38□□□□□ -0.27
NUDCD1-203ENST00000519607 ABCC6O95255 1503 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 CABP4P57796 275 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 SPC24Q8NBT2 197 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 KIAA1524Q8TCG1 905 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 BRF1Q92994 677 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 DBNDD2Q9BQY9 259 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 HELLSQ9NRZ9 838 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 SH3TC1Q8TE82 1336 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 CYP21A2P08686 494 aa13.37□□□□□ -0.27
NUDCD1-203ENST00000519607 ANO6Q4KMQ2 910 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms