RNA–Protein interactions for RNA: ENST00000519386.5

MRPS28-205, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 2

Gene MRPS28, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-205ENST00000519386 ZPR1O75312 459 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 GYS1P13807 737 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 PTGER2P43116 358 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 USPL1Q5W0Q7 1092 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 LRP10Q7Z4F1 713 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 DZIP3Q86Y13 1208 aaKnown RBP9.04□□□□□ -0.96
MRPS28-205ENST00000519386 RPAP2Q8IXW5 612 aaPredicted RBP9.04□□□□□ -0.96
MRPS28-205ENST00000519386 ARXQ96QS3 562 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 CHPF2Q9P2E5 772 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 NARFQ9UHQ1 456 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
MRPS28-205ENST00000519386 CAMTA2O94983 1202 aa9.03□□□□□ -0.96
MRPS28-205ENST00000519386 GNAI3P08754 354 aa9.03□□□□□ -0.96
MRPS28-205ENST00000519386 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
MRPS28-205ENST00000519386 NPM2Q86SE8 214 aaKnown RBP9.03□□□□□ -0.96
MRPS28-205ENST00000519386 BACH2Q9BYV9 841 aa9.03□□□□□ -0.96
MRPS28-205ENST00000519386 BCL2L12Q9HB09 334 aa9.03□□□□□ -0.96
MRPS28-205ENST00000519386 DDX21Q9NR30 783 aaKnown RBP eCLIP9.03□□□□□ -0.96
MRPS28-205ENST00000519386 RYDENQ9NUL5 291 aaKnown RBP9.03□□□□□ -0.96
MRPS28-205ENST00000519386 POTEMA6NI47 508 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 GTPBP6O43824 516 aaPredicted RBP9.02□□□□□ -0.97
MRPS28-205ENST00000519386 HMMRO75330 724 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 MMP10P09238 476 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 HOXB3P14651 431 aaPredicted RBP9.02□□□□□ -0.97
MRPS28-205ENST00000519386 POLD1P28340 1107 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 FAM161AQ3B820 660 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 TTLL7Q6ZT98 887 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 NLGN1Q8N2Q7 840 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 ANKRD44Q8N8A2 993 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 XAGE3Q8WTP9 111 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 HYPKQ9NX55 129 aa9.02□□□□□ -0.97
MRPS28-205ENST00000519386 AK9Q5TCS8 1911 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 NUP98P52948 1817 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 KIF3CO14782 793 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 PDE4AP27815 886 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 NUCB1Q02818 461 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 AIMP1Q12904 312 aaKnown RBP9.01□□□□□ -0.97
MRPS28-205ENST00000519386 POTEGQ6S5H5 508 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 KIF6Q6ZMV9 814 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 COPS6Q7L5N1 327 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 HDAC5Q9UQL6 1122 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 MAP3K15Q6ZN16 1313 aa9.01□□□□□ -0.97
MRPS28-205ENST00000519386 ADCY9O60503 1353 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 DDX58O95786 925 aaKnown RBP9□□□□□ -0.97
MRPS28-205ENST00000519386 DDR1Q08345 913 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 NFIXQ14938 502 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 HLFQ16534 295 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 TBC1D9BQ66K14 1250 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 BICDL1Q6ZP65 573 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 G2E3Q7L622 706 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 ZBTB3Q9H5J0 574 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 PDZRN3Q9UPQ7 1066 aa9□□□□□ -0.97
MRPS28-205ENST00000519386 ERVV-1B6SEH8 477 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 ALDH1L1O75891 902 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 TM4SF1P30408 202 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 C8orf34Q49A92 452 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 CEP85Q6P2H3 762 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 DNAAF4Q8WXU2 420 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 SRCIN1Q9C0H9 1055 aa8.99□□□□□ -0.97
MRPS28-205ENST00000519386 PHAXQ9H814 394 aaKnown RBP8.99□□□□□ -0.97
MRPS28-205ENST00000519386 PPP1R1BQ9UD71 204 aaPredicted RBP8.99□□□□□ -0.97
MRPS28-205ENST00000519386 MYH3P11055 1940 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 C2orf72A6NCS6 295 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 POLRMTO00411 1230 aaKnown RBP8.98□□□□□ -0.97
MRPS28-205ENST00000519386 EIF5BO60841 1220 aaKnown RBP8.98□□□□□ -0.97
MRPS28-205ENST00000519386 GNAI2P04899 355 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 RGS3P49796 1198 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 CLEC4GQ6UXB4 293 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 GIGYF2Q6Y7W6 1299 aaKnown RBP8.98□□□□□ -0.97
MRPS28-205ENST00000519386 CHD1LQ86WJ1 897 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 SIRT2Q8IXJ6 389 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 MEIS3Q99687 375 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 DCTPP1Q9H773 170 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 ZNF652Q9Y2D9 606 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
MRPS28-205ENST00000519386 NRXN2Q9P2S2 1712 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 F6X3S4 739 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 GPTP24298 496 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 ANP32AP39687 249 aaKnown RBP8.97□□□□□ -0.97
MRPS28-205ENST00000519386 KSR2Q6VAB6 950 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 ANKRD13DQ6ZTN6 518 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 PLBD2Q8NHP8 589 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 FHDC1Q9C0D6 1143 aaPredicted RBP8.97□□□□□ -0.97
MRPS28-205ENST00000519386 NIP7Q9Y221 180 aaKnown RBP eCLIP8.97□□□□□ -0.97
MRPS28-205ENST00000519386 UTYO14607 1347 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 CARMIL3Q8ND23 1372 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 C10orf71Q711Q0 1435 aa8.97□□□□□ -0.97
MRPS28-205ENST00000519386 LAMB2P55268 1798 aa8.96□□□□□ -0.97
MRPS28-205ENST00000519386 SERPINB2P05120 415 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 UBTFL1P0CB47 393 aaPredicted RBP8.96□□□□□ -0.98
MRPS28-205ENST00000519386 MTX1Q13505 466 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 BMP2KLQ5H9B9 411 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 BEND3Q5T5X7 828 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 SLC4A10Q6U841 1118 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 RIC3Q7Z5B4 369 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 LINS1Q8NG48 757 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 UBN2Q6ZU65 1347 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 KIF13BQ9NQT8 1826 aa8.96□□□□□ -0.98
MRPS28-205ENST00000519386 PI4KAP2A4QPH2 592 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms