RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 SLC19A1P41440 591 aa10.59□□□□□ -0.71
CDKL3-203ENST00000519312 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
CDKL3-203ENST00000519312 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
CDKL3-203ENST00000519312 CCDC87Q9NVE4 849 aa10.59□□□□□ -0.71
CDKL3-203ENST00000519312 KDM6AO15550 1401 aaPredicted RBP10.58□□□□□ -0.72
CDKL3-203ENST00000519312 KCNA3P22001 575 aa10.58□□□□□ -0.72
CDKL3-203ENST00000519312 EIF4A2Q14240 407 aaKnown RBP10.58□□□□□ -0.72
CDKL3-203ENST00000519312 LAPTM4AQ15012 233 aa10.58□□□□□ -0.72
CDKL3-203ENST00000519312 DCAF5Q96JK2 942 aa10.58□□□□□ -0.72
CDKL3-203ENST00000519312 TNRC6CQ9HCJ0 1690 aaKnown RBP10.57□□□□□ -0.72
CDKL3-203ENST00000519312 ADAMTS7Q9UKP4 1686 aa10.57□□□□□ -0.72
CDKL3-203ENST00000519312 FSTL1Q12841 308 aa10.57□□□□□ -0.72
CDKL3-203ENST00000519312 JMYQ8N9B5 988 aa10.57□□□□□ -0.72
CDKL3-203ENST00000519312 KRI1Q8N9T8 703 aaKnown RBP10.57□□□□□ -0.72
CDKL3-203ENST00000519312 ZC3H15Q8WU90 426 aaKnown RBP10.57□□□□□ -0.72
CDKL3-203ENST00000519312 WWC3Q9ULE0 1092 aa10.57□□□□□ -0.72
CDKL3-203ENST00000519312 BCS1LQ9Y276 419 aa10.57□□□□□ -0.72
CDKL3-203ENST00000519312 ZC3H4Q9UPT8 1303 aaKnown RBP10.57□□□□□ -0.72
CDKL3-203ENST00000519312 TJP1Q07157 1748 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 A0A0G2JLW4 131 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 PPM1GO15355 546 aaPredicted RBP10.56□□□□□ -0.72
CDKL3-203ENST00000519312 FMNL1O95466 1100 aaPredicted RBP10.56□□□□□ -0.72
CDKL3-203ENST00000519312 DPEP1P16444 411 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 PLA2G2CQ5R387 149 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 LIAT1Q6ZQX7 453 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 FAM160A2Q8N612 972 aaPredicted RBP10.56□□□□□ -0.72
CDKL3-203ENST00000519312 GPCPD1Q9NPB8 672 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 NMRK2Q9NPI5 230 aa10.56□□□□□ -0.72
CDKL3-203ENST00000519312 USP42Q9H9J4 1324 aaKnown RBP10.56□□□□□ -0.72
CDKL3-203ENST00000519312 MYH14Q7Z406 1995 aaKnown RBP10.56□□□□□ -0.72
CDKL3-203ENST00000519312 KDM4AO75164 1064 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 ZMYND10O75800 440 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 RFC4P35249 363 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 CLCN1P35523 988 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 AMOTQ4VCS5 1084 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 RNF19BQ6ZMZ0 732 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 PDZRN3Q9UPQ7 1066 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 KDM2BQ8NHM5 1336 aa10.55□□□□□ -0.72
CDKL3-203ENST00000519312 NRG2O14511 850 aaPredicted RBP10.54□□□□□ -0.72
CDKL3-203ENST00000519312 GRIPAP1Q4V328 841 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 PLEKHO1Q53GL0 409 aaPredicted RBP10.54□□□□□ -0.72
CDKL3-203ENST00000519312 C9orf131Q5VYM1 1079 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 SPRYD7Q5W111 196 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 BRICD5Q6PL45 260 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 KLRG1Q96E93 195 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 PRDM9Q9NQV7 894 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 FAM217BQ9NTX9 383 aaPredicted RBP10.54□□□□□ -0.72
CDKL3-203ENST00000519312 PIM2Q9P1W9 311 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 TIMELESSQ9UNS1 1208 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 MRC1P22897 1456 aa10.54□□□□□ -0.72
CDKL3-203ENST00000519312 KCPQ6ZWJ8 1503 aa10.53□□□□□ -0.72
CDKL3-203ENST00000519312 NRXN2Q9P2S2 1712 aa10.53□□□□□ -0.72
CDKL3-203ENST00000519312 HLA-CQ95604 372 aa10.53□□□□□ -0.72
CDKL3-203ENST00000519312 REPIN1Q9BWE0 567 aaKnown RBP10.53□□□□□ -0.72
CDKL3-203ENST00000519312 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
CDKL3-203ENST00000519312 LCE2BO14633 110 aa10.52□□□□□ -0.73
CDKL3-203ENST00000519312 CRKLP46109 303 aaKnown RBP10.52□□□□□ -0.73
CDKL3-203ENST00000519312 DDR1Q08345 913 aa10.52□□□□□ -0.73
CDKL3-203ENST00000519312 DALRD3Q5D0E6 543 aaKnown RBP10.52□□□□□ -0.73
CDKL3-203ENST00000519312 TRIM67Q6ZTA4 783 aa10.52□□□□□ -0.73
CDKL3-203ENST00000519312 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
CDKL3-203ENST00000519312 PCNTO95613 3336 aa10.51□□□□□ -0.73
CDKL3-203ENST00000519312 POLRMTO00411 1230 aaKnown RBP10.51□□□□□ -0.73
CDKL3-203ENST00000519312 TM4SF1P30408 202 aa10.51□□□□□ -0.73
CDKL3-203ENST00000519312 CABP4P57796 275 aa10.51□□□□□ -0.73
CDKL3-203ENST00000519312 ZNF530Q6P9A1 599 aaPredicted RBP10.51□□□□□ -0.73
CDKL3-203ENST00000519312 C16orf71Q8IYS4 520 aaPredicted RBP10.51□□□□□ -0.73
CDKL3-203ENST00000519312 FCF1Q9Y324 198 aaKnown RBP10.51□□□□□ -0.73
CDKL3-203ENST00000519312 SCN11AQ9UI33 1791 aa10.51□□□□□ -0.73
CDKL3-203ENST00000519312 SBF1O95248 1867 aa10.51□□□□□ -0.73
CDKL3-203ENST00000519312 ZNF598Q86UK7 904 aaKnown RBP10.5□□□□□ -0.73
CDKL3-203ENST00000519312 RNF181Q9P0P0 153 aa10.5□□□□□ -0.73
CDKL3-203ENST00000519312 HOXA2O43364 376 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 MTHFSP49914 203 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 USP46P62068 366 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 Q3C1V9 767 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 C1orf141Q5JVX7 400 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 ZNF697Q5TEC3 545 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
CDKL3-203ENST00000519312 SMC1BQ8NDV3 1235 aa10.49□□□□□ -0.73
CDKL3-203ENST00000519312 SRP68Q9UHB9 627 aaKnown RBP10.49□□□□□ -0.73
CDKL3-203ENST00000519312 SOS1Q07889 1333 aaPredicted RBP10.49□□□□□ -0.73
CDKL3-203ENST00000519312 GUCA2AQ02747 115 aa10.48□□□□□ -0.73
CDKL3-203ENST00000519312 TTLL12Q14166 644 aaPredicted RBP10.48□□□□□ -0.73
CDKL3-203ENST00000519312 CLSPNQ9HAW4 1339 aa10.48□□□□□ -0.73
CDKL3-203ENST00000519312 TIAM2Q8IVF5 1701 aa10.47□□□□□ -0.73
CDKL3-203ENST00000519312 PTCD1O75127 700 aaKnown RBP10.47□□□□□ -0.73
CDKL3-203ENST00000519312 CHRNA5P30532 468 aa10.47□□□□□ -0.73
CDKL3-203ENST00000519312 MSS51Q4VC12 460 aa10.47□□□□□ -0.73
CDKL3-203ENST00000519312 COL13A1Q5TAT6 717 aaPredicted RBP10.47□□□□□ -0.73
CDKL3-203ENST00000519312 AEBP1Q8IUX7 1158 aa10.47□□□□□ -0.73
CDKL3-203ENST00000519312 NFATC2IPQ8NCF5 419 aa10.47□□□□□ -0.73
CDKL3-203ENST00000519312 AFDNP55196 1824 aaKnown RBP10.47□□□□□ -0.73
CDKL3-203ENST00000519312 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 CYP19A1P11511 503 aaPredicted RBP10.46□□□□□ -0.73
CDKL3-203ENST00000519312 LMNB1P20700 586 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 HTRA3P83110 453 aa10.46□□□□□ -0.73
CDKL3-203ENST00000519312 AMHR2Q16671 573 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms