RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 SASH1O94885 1247 aa15.21■□□□□ 0.03
SPIDR-209ENST00000519141 HSP90B1P14625 803 aaKnown RBP15.21■□□□□ 0.03
SPIDR-209ENST00000519141 CTSWP56202 376 aa15.21■□□□□ 0.03
SPIDR-209ENST00000519141 CCDC57Q2TAC2 916 aa15.21■□□□□ 0.03
SPIDR-209ENST00000519141 SYNE4Q8N205 404 aa15.21■□□□□ 0.03
SPIDR-209ENST00000519141 FAM177BA6PVY3 158 aa15.2■□□□□ 0.02
SPIDR-209ENST00000519141 CSF1RP07333 972 aa15.2■□□□□ 0.02
SPIDR-209ENST00000519141 ADRA2BP18089 450 aa15.2■□□□□ 0.02
SPIDR-209ENST00000519141 USPL1Q5W0Q7 1092 aa15.2■□□□□ 0.02
SPIDR-209ENST00000519141 SMIM5Q71RC9 77 aa15.2■□□□□ 0.02
SPIDR-209ENST00000519141 GPATCH3Q96I76 525 aa15.2■□□□□ 0.02
SPIDR-209ENST00000519141 CDC45O75419 566 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 PHF14O94880 888 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 NTSR2O95665 410 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 IFIT2P09913 472 aaKnown RBP15.19■□□□□ 0.02
SPIDR-209ENST00000519141 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 TSHZ3Q63HK5 1081 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 AACSQ86V21 672 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
SPIDR-209ENST00000519141 SRP68Q9UHB9 627 aaKnown RBP15.19■□□□□ 0.02
SPIDR-209ENST00000519141 AK9Q5TCS8 1911 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 RFC4P35249 363 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 IFIT5Q13325 482 aaKnown RBP15.19■□□□□ 0.02
SPIDR-209ENST00000519141 TAF7LQ5H9L4 462 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 TTLL11Q8NHH1 800 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 UPF2Q9HAU5 1272 aaKnown RBP15.19■□□□□ 0.02
SPIDR-209ENST00000519141 BCL2L12Q9HB09 334 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 SPON1Q9HCB6 807 aa15.19■□□□□ 0.02
SPIDR-209ENST00000519141 USP42Q9H9J4 1324 aaKnown RBP15.18■□□□□ 0.02
SPIDR-209ENST00000519141 CASZ1Q86V15 1759 aa15.18■□□□□ 0.02
SPIDR-209ENST00000519141 CIAO1O76071 339 aa15.18■□□□□ 0.02
SPIDR-209ENST00000519141 SDSP20132 328 aa15.18■□□□□ 0.02
SPIDR-209ENST00000519141 ANP32AP39687 249 aaKnown RBP15.18■□□□□ 0.02
SPIDR-209ENST00000519141 IL15P40933 162 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-209ENST00000519141 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
SPIDR-209ENST00000519141 CCDC85AQ96PX6 553 aaPredicted RBP15.18■□□□□ 0.02
SPIDR-209ENST00000519141 FBXO3Q9UK99 471 aa15.18■□□□□ 0.02
SPIDR-209ENST00000519141 TTC41PQ6P2S7 1318 aa15.18■□□□□ 0.02
SPIDR-209ENST00000519141 EYA2O00167 538 aa15.17■□□□□ 0.02
SPIDR-209ENST00000519141 SEC24BO95487 1268 aa15.17■□□□□ 0.02
SPIDR-209ENST00000519141 TFCP2Q12800 502 aa15.17■□□□□ 0.02
SPIDR-209ENST00000519141 ZNF827Q17R98 1081 aa15.17■□□□□ 0.02
SPIDR-209ENST00000519141 TBC1D9BQ66K14 1250 aa15.17■□□□□ 0.02
SPIDR-209ENST00000519141 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
SPIDR-209ENST00000519141 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.16■□□□□ 0.02
SPIDR-209ENST00000519141 ANKRD18BA2A2Z9 1011 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 HCLS1P14317 486 aaPredicted RBP15.16■□□□□ 0.02
SPIDR-209ENST00000519141 SSFA2P28290 1259 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 BICDL1Q6ZP65 573 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 ATG9AQ7Z3C6 839 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 AKT1S1Q96B36 256 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 EAF2Q96CJ1 260 aaPredicted RBP15.16■□□□□ 0.02
SPIDR-209ENST00000519141 GREM2Q9H772 168 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 ECHDC1Q9NTX5 307 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 ERC2O15083 957 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 ZBTB7AO95365 584 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 ITGA6P23229 1130 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 CASC1Q6TDU7 716 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 PI4K2BQ8TCG2 481 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 SETDB2Q96T68 719 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 NYXQ9GZU5 481 aa15.16■□□□□ 0.02
SPIDR-209ENST00000519141 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.16■□□□□ 0.02
SPIDR-209ENST00000519141 GLRX3O76003 335 aaKnown RBP15.15■□□□□ 0.02
SPIDR-209ENST00000519141 TNNI3KQ59H18 835 aa15.15■□□□□ 0.02
SPIDR-209ENST00000519141 FPGT-TNNI3KV9GXZ4 949 aa15.15■□□□□ 0.02
SPIDR-209ENST00000519141 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
SPIDR-209ENST00000519141 EIF5BO60841 1220 aaKnown RBP15.14■□□□□ 0.01
SPIDR-209ENST00000519141 GTF2E1P29083 439 aaPredicted RBP15.14■□□□□ 0.01
SPIDR-209ENST00000519141 MFAP1P55081 439 aaKnown RBP15.14■□□□□ 0.01
SPIDR-209ENST00000519141 CCDC152Q4G0S7 254 aa15.14■□□□□ 0.01
SPIDR-209ENST00000519141 LRRC24Q50LG9 513 aa15.14■□□□□ 0.01
SPIDR-209ENST00000519141 CCDC8Q9H0W5 538 aaPredicted RBP15.14■□□□□ 0.01
SPIDR-209ENST00000519141 GPR108Q9NPR9 543 aa15.14■□□□□ 0.01
SPIDR-209ENST00000519141 ZNF609O15014 1411 aa15.13■□□□□ 0.01
SPIDR-209ENST00000519141 RTL9Q8NET4 1388 aa15.13■□□□□ 0.01
SPIDR-209ENST00000519141 ERFEQ4G0M1 354 aa15.13■□□□□ 0.01
SPIDR-209ENST00000519141 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
SPIDR-209ENST00000519141 PUS3Q9BZE2 481 aaKnown RBP15.13■□□□□ 0.01
SPIDR-209ENST00000519141 SPEF2Q9C093 1822 aa15.13■□□□□ 0.01
SPIDR-209ENST00000519141 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
SPIDR-209ENST00000519141 PTGER2P43116 358 aa15.12■□□□□ 0.01
SPIDR-209ENST00000519141 RILPL2Q969X0 211 aa15.12■□□□□ 0.01
SPIDR-209ENST00000519141 TLR7Q9NYK1 1049 aaKnown RBP15.12■□□□□ 0.01
SPIDR-209ENST00000519141 CEP126Q9P2H0 1117 aa15.12■□□□□ 0.01
SPIDR-209ENST00000519141 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
SPIDR-209ENST00000519141 RIC1Q4ADV7 1423 aa15.12■□□□□ 0.01
SPIDR-209ENST00000519141 LDHAL6AQ6ZMR3 332 aa15.12■□□□□ 0.01
SPIDR-209ENST00000519141 DBNLQ9UJU6 430 aaKnown RBP15.12■□□□□ 0.01
SPIDR-209ENST00000519141 ABCC12Q96J65 1359 aa15.11■□□□□ 0.01
SPIDR-209ENST00000519141 TPTE2Q6XPS3 522 aa15.11■□□□□ 0.01
SPIDR-209ENST00000519141 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
SPIDR-209ENST00000519141 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
SPIDR-209ENST00000519141 CNNM1Q9NRU3 951 aa15.11■□□□□ 0.01
SPIDR-209ENST00000519141 PPP1R1BQ9UD71 204 aaPredicted RBP15.11■□□□□ 0.01
SPIDR-209ENST00000519141 PNPLA7Q6ZV29 1317 aa15.1■□□□□ 0.01
SPIDR-209ENST00000519141 SLC10A5Q5PT55 438 aa15.1■□□□□ 0.01
SPIDR-209ENST00000519141 SGIP1Q9BQI5 828 aa15.1■□□□□ 0.01
SPIDR-209ENST00000519141 TFCP2L1Q9NZI6 479 aa15.1■□□□□ 0.01
SPIDR-209ENST00000519141 AKAP2Q9Y2D5 859 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms