RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
MSR1-210ENST00000519060 NLRP7Q8WX94 980 aa12.68□□□□□ -0.38
MSR1-210ENST00000519060 LRCH3Q96II8 777 aa12.68□□□□□ -0.38
MSR1-210ENST00000519060 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
MSR1-210ENST00000519060 NARFQ9UHQ1 456 aa12.68□□□□□ -0.38
MSR1-210ENST00000519060 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
MSR1-210ENST00000519060 HMOX1P09601 288 aa12.67□□□□□ -0.38
MSR1-210ENST00000519060 AMHR2Q16671 573 aa12.67□□□□□ -0.38
MSR1-210ENST00000519060 RNF166Q96A37 237 aaPredicted RBP12.67□□□□□ -0.38
MSR1-210ENST00000519060 KLRG1Q96E93 195 aa12.67□□□□□ -0.38
MSR1-210ENST00000519060 COL5A3P25940 1745 aaPredicted RBP12.67□□□□□ -0.38
MSR1-210ENST00000519060 SERPINB2P05120 415 aa12.66□□□□□ -0.38
MSR1-210ENST00000519060 PRELPP51888 382 aa12.66□□□□□ -0.38
MSR1-210ENST00000519060 MTHFSDQ2M296 383 aaKnown RBP12.66□□□□□ -0.38
MSR1-210ENST00000519060 JMYQ8N9B5 988 aa12.66□□□□□ -0.38
MSR1-210ENST00000519060 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
MSR1-210ENST00000519060 ZBTB1Q9Y2K1 713 aa12.66□□□□□ -0.38
MSR1-210ENST00000519060 KCPQ6ZWJ8 1503 aa12.66□□□□□ -0.38
MSR1-210ENST00000519060 RASSF7Q02833 373 aa12.65□□□□□ -0.38
MSR1-210ENST00000519060 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
MSR1-210ENST00000519060 BRCA1P38398 1863 aaKnown RBP12.64□□□□□ -0.39
MSR1-210ENST00000519060 CANXP27824 592 aaKnown RBP12.64□□□□□ -0.39
MSR1-210ENST00000519060 BCAMP50895 628 aa12.64□□□□□ -0.39
MSR1-210ENST00000519060 MDM2Q00987 491 aaPredicted RBP12.64□□□□□ -0.39
MSR1-210ENST00000519060 TTLL6Q8N841 843 aa12.64□□□□□ -0.39
MSR1-210ENST00000519060 GLTPD2A6NH11 291 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 VEGFAP15692 232 aaPredicted RBP12.63□□□□□ -0.39
MSR1-210ENST00000519060 LMNB1P20700 586 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 CLCN1P35523 988 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 SLC4A3P48751 1232 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 COL13A1Q5TAT6 717 aaPredicted RBP12.63□□□□□ -0.39
MSR1-210ENST00000519060 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 C2CD5Q86YS7 1000 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 SLF2Q8IX21 1173 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 SMC1BQ8NDV3 1235 aa12.63□□□□□ -0.39
MSR1-210ENST00000519060 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
MSR1-210ENST00000519060 H0YIN7 160 aa12.62□□□□□ -0.39
MSR1-210ENST00000519060 PER1O15534 1290 aaPredicted RBP12.62□□□□□ -0.39
MSR1-210ENST00000519060 DIAPH1O60610 1272 aaKnown RBP12.62□□□□□ -0.39
MSR1-210ENST00000519060 EIF5P55010 431 aaKnown RBP12.62□□□□□ -0.39
MSR1-210ENST00000519060 PDE4DQ08499 809 aa12.62□□□□□ -0.39
MSR1-210ENST00000519060 TMUB1Q9BVT8 246 aa12.62□□□□□ -0.39
MSR1-210ENST00000519060 GPCPD1Q9NPB8 672 aa12.62□□□□□ -0.39
MSR1-210ENST00000519060 COL15A1P39059 1388 aa12.61□□□□□ -0.39
MSR1-210ENST00000519060 POTECB2RU33 542 aa12.61□□□□□ -0.39
MSR1-210ENST00000519060 STARD3NLO95772 234 aa12.61□□□□□ -0.39
MSR1-210ENST00000519060 IL17REQ8NFR9 667 aa12.61□□□□□ -0.39
MSR1-210ENST00000519060 TJP1Q07157 1748 aa12.61□□□□□ -0.39
MSR1-210ENST00000519060 ZC3H4Q9UPT8 1303 aaKnown RBP12.61□□□□□ -0.39
MSR1-210ENST00000519060 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
MSR1-210ENST00000519060 SBF1O95248 1867 aa12.6□□□□□ -0.39
MSR1-210ENST00000519060 NFKBIEO00221 500 aa12.6□□□□□ -0.39
MSR1-210ENST00000519060 TBC1D9BQ66K14 1250 aa12.6□□□□□ -0.39
MSR1-210ENST00000519060 CCDC24Q8N4L8 307 aa12.6□□□□□ -0.39
MSR1-210ENST00000519060 ZNF496Q96IT1 587 aaPredicted RBP12.6□□□□□ -0.39
MSR1-210ENST00000519060 TSR3Q9UJK0 312 aaKnown RBP12.6□□□□□ -0.39
MSR1-210ENST00000519060 SCN11AQ9UI33 1791 aa12.59□□□□□ -0.39
MSR1-210ENST00000519060 A0A087WZG4 1122 aa12.59□□□□□ -0.39
MSR1-210ENST00000519060 RNF40O75150 1001 aa12.59□□□□□ -0.39
MSR1-210ENST00000519060 TTLL12Q14166 644 aaPredicted RBP12.59□□□□□ -0.39
MSR1-210ENST00000519060 CC2D1BQ5T0F9 858 aaKnown RBP12.59□□□□□ -0.39
MSR1-210ENST00000519060 ZNF622Q969S3 477 aaKnown RBP eCLIP12.59□□□□□ -0.39
MSR1-210ENST00000519060 REPIN1Q9BWE0 567 aaKnown RBP12.59□□□□□ -0.39
MSR1-210ENST00000519060 BRIP1Q9BX63 1249 aa12.59□□□□□ -0.39
MSR1-210ENST00000519060 TBC1D2BQ9UPU7 963 aa12.59□□□□□ -0.39
MSR1-210ENST00000519060 HPS5Q9UPZ3 1129 aa12.59□□□□□ -0.39
MSR1-210ENST00000519060 C21orf2O43822 256 aa12.58□□□□□ -0.4
MSR1-210ENST00000519060 A1BGP04217 495 aa12.58□□□□□ -0.4
MSR1-210ENST00000519060 PPP4CP60510 307 aa12.58□□□□□ -0.4
MSR1-210ENST00000519060 ZNF790Q6PG37 636 aa12.58□□□□□ -0.4
MSR1-210ENST00000519060 TTC5Q8N0Z6 440 aa12.58□□□□□ -0.4
MSR1-210ENST00000519060 TEX13AQ9BXU3 409 aaPredicted RBP12.58□□□□□ -0.4
MSR1-210ENST00000519060 KIF7Q2M1P5 1343 aa12.58□□□□□ -0.4
MSR1-210ENST00000519060 CARMIL3Q8ND23 1372 aa12.57□□□□□ -0.4
MSR1-210ENST00000519060 PDE6BP35913 854 aa12.57□□□□□ -0.4
MSR1-210ENST00000519060 PTPN5P54829 565 aa12.57□□□□□ -0.4
MSR1-210ENST00000519060 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
MSR1-210ENST00000519060 CCER1Q8TC90 406 aaPredicted RBP12.57□□□□□ -0.4
MSR1-210ENST00000519060 NECTIN2Q92692 538 aa12.57□□□□□ -0.4
MSR1-210ENST00000519060 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
MSR1-210ENST00000519060 DDX11L8A8MPP1 907 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
MSR1-210ENST00000519060 TEFQ10587 303 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
MSR1-210ENST00000519060 PRR5LQ6MZQ0 368 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 PARP9Q8IXQ6 854 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 ZNF330Q9Y3S2 320 aaPredicted RBP12.56□□□□□ -0.4
MSR1-210ENST00000519060 MRC1P22897 1456 aa12.56□□□□□ -0.4
MSR1-210ENST00000519060 AFDNP55196 1824 aaKnown RBP12.55□□□□□ -0.4
MSR1-210ENST00000519060 KCNQ3O43525 872 aa12.55□□□□□ -0.4
MSR1-210ENST00000519060 SLC10A3P09131 477 aa12.55□□□□□ -0.4
MSR1-210ENST00000519060 IL6STP40189 918 aaPredicted RBP12.55□□□□□ -0.4
MSR1-210ENST00000519060 ERFEQ4G0M1 354 aa12.55□□□□□ -0.4
MSR1-210ENST00000519060 SETDB2Q96T68 719 aa12.55□□□□□ -0.4
MSR1-210ENST00000519060 FAM217BQ9NTX9 383 aaPredicted RBP12.55□□□□□ -0.4
MSR1-210ENST00000519060 WBP1LQ9NX94 342 aa12.55□□□□□ -0.4
MSR1-210ENST00000519060 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
MSR1-210ENST00000519060 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms