RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-209ENST00000518930 SF3B3Q15393 1217 aaKnown RBP30.46■■■□□ 2.47
PCM1-209ENST00000518930 RBM17Q96I25 401 aaKnown RBP30.46■■■□□ 2.47
PCM1-209ENST00000518930 PIM2Q9P1W9 311 aa30.46■■■□□ 2.47
PCM1-209ENST00000518930 COG6Q9Y2V7 657 aa30.46■■■□□ 2.47
PCM1-209ENST00000518930 C20orf194Q5TEA3 1177 aa30.45■■■□□ 2.47
PCM1-209ENST00000518930 SUCLG2Q96I99 432 aa30.45■■■□□ 2.47
PCM1-209ENST00000518930 SUPT16HQ9Y5B9 1047 aaKnown RBP30.45■■■□□ 2.47
PCM1-209ENST00000518930 DDX46Q7L014 1031 aaKnown RBP30.44■■■□□ 2.46
PCM1-209ENST00000518930 CNKSR1Q969H4 720 aa30.44■■■□□ 2.46
PCM1-209ENST00000518930 DDX19BQ9UMR2 479 aa30.44■■■□□ 2.46
PCM1-209ENST00000518930 KCNA3P22001 575 aa30.43■■■□□ 2.46
PCM1-209ENST00000518930 HOXA10P31260 410 aaPredicted RBP30.42■■■□□ 2.46
PCM1-209ENST00000518930 TTLL11Q8NHH1 800 aa30.42■■■□□ 2.46
PCM1-209ENST00000518930 CCDC85AQ96PX6 553 aaPredicted RBP30.42■■■□□ 2.46
PCM1-209ENST00000518930 CHMP4BQ9H444 224 aaKnown RBP30.42■■■□□ 2.46
PCM1-209ENST00000518930 ALDH1B1P30837 517 aa30.41■■■□□ 2.46
PCM1-209ENST00000518930 FOXO4P98177 505 aa30.41■■■□□ 2.46
PCM1-209ENST00000518930 TTLL6Q8N841 843 aa30.41■■■□□ 2.46
PCM1-209ENST00000518930 BICC1Q9H694 974 aaKnown RBP30.41■■■□□ 2.46
PCM1-209ENST00000518930 WWC3Q9ULE0 1092 aa30.41■■■□□ 2.46
PCM1-209ENST00000518930 CHMP3Q9Y3E7 222 aa30.41■■■□□ 2.46
PCM1-209ENST00000518930 DALRD3Q5D0E6 543 aaKnown RBP30.4■■■□□ 2.46
PCM1-209ENST00000518930 CRAMP1Q96RY5 1269 aa30.4■■■□□ 2.46
PCM1-209ENST00000518930 RTL9Q8NET4 1388 aa30.4■■■□□ 2.46
PCM1-209ENST00000518930 EPHA10Q5JZY3 1008 aa30.39■■■□□ 2.46
PCM1-209ENST00000518930 LMBR1LQ6UX01 489 aa30.39■■■□□ 2.46
PCM1-209ENST00000518930 LRRFIP2Q9Y608 721 aaKnown RBP30.39■■■□□ 2.46
PCM1-209ENST00000518930 ZBTB7BO15156 539 aaPredicted RBP30.38■■■□□ 2.45
PCM1-209ENST00000518930 GNAI2P04899 355 aa30.38■■■□□ 2.45
PCM1-209ENST00000518930 CSF1RP07333 972 aa30.38■■■□□ 2.45
PCM1-209ENST00000518930 PELP1Q8IZL8 1130 aaKnown RBP30.38■■■□□ 2.45
PCM1-209ENST00000518930 KAZALD1Q96I82 304 aa30.38■■■□□ 2.45
PCM1-209ENST00000518930 GREM2Q9H772 168 aa30.38■■■□□ 2.45
PCM1-209ENST00000518930 BCS1LQ9Y276 419 aa30.38■■■□□ 2.45
PCM1-209ENST00000518930 ARFGEF1Q9Y6D6 1849 aa30.38■■■□□ 2.45
PCM1-209ENST00000518930 GRAPQ13588 217 aa30.37■■■□□ 2.45
PCM1-209ENST00000518930 FAM161AQ3B820 660 aa30.37■■■□□ 2.45
PCM1-209ENST00000518930 PRPF40BQ6NWY9 871 aaKnown RBP30.37■■■□□ 2.45
PCM1-209ENST00000518930 GRAPLQ8TC17 118 aaPredicted RBP30.37■■■□□ 2.45
PCM1-209ENST00000518930 TAF1P21675 1872 aa30.37■■■□□ 2.45
PCM1-209ENST00000518930 SLX4Q8IY92 1834 aa30.36■■■□□ 2.45
PCM1-209ENST00000518930 CDC5LQ99459 802 aaKnown RBP30.36■■■□□ 2.45
PCM1-209ENST00000518930 SPEF2Q9C093 1822 aa30.36■■■□□ 2.45
PCM1-209ENST00000518930 RABL6Q3YEC7 729 aaPredicted RBP30.35■■■□□ 2.45
PCM1-209ENST00000518930 ANKRD44Q8N8A2 993 aa30.35■■■□□ 2.45
PCM1-209ENST00000518930 SEC31BQ9NQW1 1179 aa30.35■■■□□ 2.45
PCM1-209ENST00000518930 ITGA6P23229 1130 aa30.34■■■□□ 2.45
PCM1-209ENST00000518930 IFIT5Q13325 482 aaKnown RBP30.34■■■□□ 2.45
PCM1-209ENST00000518930 CCDC57Q2TAC2 916 aa30.34■■■□□ 2.45
PCM1-209ENST00000518930 ANKRD18BA2A2Z9 1011 aa30.33■■■□□ 2.45
PCM1-209ENST00000518930 PPEF1O14829 653 aaPredicted RBP30.33■■■□□ 2.45
PCM1-209ENST00000518930 ANKRD18AQ8IVF6 992 aa30.32■■■□□ 2.44
PCM1-209ENST00000518930 BBOX1O75936 387 aa30.31■■■□□ 2.44
PCM1-209ENST00000518930 GPR162Q16538 588 aa30.31■■■□□ 2.44
PCM1-209ENST00000518930 TAF7LQ5H9L4 462 aa30.31■■■□□ 2.44
PCM1-209ENST00000518930 CELF1Q92879 486 aaKnown RBP30.31■■■□□ 2.44
PCM1-209ENST00000518930 TMX4Q9H1E5 349 aaPredicted RBP30.31■■■□□ 2.44
PCM1-209ENST00000518930 C1orf115Q9H7X2 142 aa30.31■■■□□ 2.44
PCM1-209ENST00000518930 COL4A1P02462 1669 aa30.3■■■□□ 2.44
PCM1-209ENST00000518930 IGHMBP2P38935 993 aaKnown RBP30.3■■■□□ 2.44
PCM1-209ENST00000518930 TMC4Q7Z404 712 aa30.3■■■□□ 2.44
PCM1-209ENST00000518930 ZNF219Q9P2Y4 722 aaPredicted RBP30.3■■■□□ 2.44
PCM1-209ENST00000518930 DCAF8L1A6NGE4 600 aa30.29■■■□□ 2.44
PCM1-209ENST00000518930 RPS8P62241 208 aaKnown RBP30.29■■■□□ 2.44
PCM1-209ENST00000518930 CRBNQ96SW2 442 aa30.29■■■□□ 2.44
PCM1-209ENST00000518930 SOGA3Q5TF21 947 aa30.28■■■□□ 2.44
PCM1-209ENST00000518930 ZBTB40Q9NUA8 1239 aa30.28■■■□□ 2.44
PCM1-209ENST00000518930 LRRC37AA6NMS7 1700 aa30.27■■■□□ 2.44
PCM1-209ENST00000518930 C21orf2O43822 256 aa30.27■■■□□ 2.44
PCM1-209ENST00000518930 YBX3P16989 372 aaKnown RBP eCLIP30.26■■■□□ 2.43
PCM1-209ENST00000518930 MPHOSPH8Q99549 860 aa30.26■■■□□ 2.43
PCM1-209ENST00000518930 MTX1Q13505 466 aa30.25■■■□□ 2.43
PCM1-209ENST00000518930 ATP6V0A2Q9Y487 856 aa30.25■■■□□ 2.43
PCM1-209ENST00000518930 SRGAP3O43295 1099 aa30.24■■■□□ 2.43
PCM1-209ENST00000518930 CCDC93Q567U6 631 aa30.24■■■□□ 2.43
PCM1-209ENST00000518930 CC2D2BQ6DHV5 1058 aa30.23■■■□□ 2.43
PCM1-209ENST00000518930 SP8Q8IXZ3 490 aa30.23■■■□□ 2.43
PCM1-209ENST00000518930 GRIN3BO60391 1043 aa30.22■■■□□ 2.43
PCM1-209ENST00000518930 C7orf43Q8WVR3 580 aa30.22■■■□□ 2.43
PCM1-209ENST00000518930 BSDC1Q9NW68 430 aaPredicted RBP30.22■■■□□ 2.43
PCM1-209ENST00000518930 GOLGB1Q14789 3259 aaKnown RBP30.22■■■□□ 2.43
PCM1-209ENST00000518930 ZNF594Q96JF6 807 aaPredicted RBP30.21■■■□□ 2.43
PCM1-209ENST00000518930 GRIPAP1Q4V328 841 aa30.2■■■□□ 2.43
PCM1-209ENST00000518930 CEP85Q6P2H3 762 aa30.2■■■□□ 2.43
PCM1-209ENST00000518930 LDHAL6AQ6ZMR3 332 aa30.2■■■□□ 2.43
PCM1-209ENST00000518930 CNNM1Q9NRU3 951 aa30.2■■■□□ 2.43
PCM1-209ENST00000518930 FER1L6Q2WGJ9 1857 aa30.2■■■□□ 2.42
PCM1-209ENST00000518930 IRX6P78412 446 aaPredicted RBP30.19■■■□□ 2.42
PCM1-209ENST00000518930 ATP8B2P98198 1209 aa30.19■■■□□ 2.42
PCM1-209ENST00000518930 OLFM4Q6UX06 510 aa30.19■■■□□ 2.42
PCM1-209ENST00000518930 RTKN2Q8IZC4 609 aa30.19■■■□□ 2.42
PCM1-209ENST00000518930 PNMA6EA0A0J9YXQ4 647 aa30.18■■■□□ 2.42
PCM1-209ENST00000518930 RFX5P48382 616 aaPredicted RBP30.18■■■□□ 2.42
PCM1-209ENST00000518930 AAMPQ13685 434 aa30.17■■■□□ 2.42
PCM1-209ENST00000518930 ARHGAP27Q6ZUM4 889 aa30.17■■■□□ 2.42
PCM1-209ENST00000518930 RPAP2Q8IXW5 612 aaPredicted RBP30.17■■■□□ 2.42
PCM1-209ENST00000518930 KLHDC4Q8TBB5 520 aa30.17■■■□□ 2.42
PCM1-209ENST00000518930 A0A1B0GUL6 1792 aa30.16■■■□□ 2.42
PCM1-209ENST00000518930 PTPN12Q05209 780 aaKnown RBP30.16■■■□□ 2.42
PCM1-209ENST00000518930 SLC51AQ86UW1 340 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 1185.8 ms