RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ATP6V0A2Q9Y487 856 aa17.02■□□□□ 0.32
VEGFA-219ENST00000518824 GLTPD2A6NH11 291 aa17.01■□□□□ 0.31
VEGFA-219ENST00000518824 MRPL50Q8N5N7 158 aaKnown RBP17.01■□□□□ 0.31
VEGFA-219ENST00000518824 SSH1Q8WYL5 1049 aa17.01■□□□□ 0.31
VEGFA-219ENST00000518824 BCL2L13Q9BXK5 485 aa17.01■□□□□ 0.31
VEGFA-219ENST00000518824 LRRC37AA6NMS7 1700 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 POTECB2RU33 542 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 H7C1W4 665 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 IARSP41252 1262 aaKnown RBP17■□□□□ 0.31
VEGFA-219ENST00000518824 CASP7P55210 303 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 GCKRQ14397 625 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 PSMD1Q99460 953 aa17■□□□□ 0.31
VEGFA-219ENST00000518824 CDHR2Q9BYE9 1310 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 ZNF541Q9H0D2 1346 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
VEGFA-219ENST00000518824 DUOX1Q9NRD9 1551 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 PDE8AO60658 829 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 BBOX1O75936 387 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
VEGFA-219ENST00000518824 BEND3Q5T5X7 828 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 CC2D2BQ6DHV5 1058 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 SP8Q8IXZ3 490 aa16.99■□□□□ 0.31
VEGFA-219ENST00000518824 MYH3P11055 1940 aa16.98■□□□□ 0.31
VEGFA-219ENST00000518824 LINS1Q8NG48 757 aa16.98■□□□□ 0.31
VEGFA-219ENST00000518824 KDM2BQ8NHM5 1336 aa16.97■□□□□ 0.31
VEGFA-219ENST00000518824 WDR90Q96KV7 1748 aa16.97■□□□□ 0.31
VEGFA-219ENST00000518824 SPEF2Q9C093 1822 aa16.97■□□□□ 0.31
VEGFA-219ENST00000518824 CTSWP56202 376 aa16.96■□□□□ 0.31
VEGFA-219ENST00000518824 AOC3Q16853 763 aa16.96■□□□□ 0.31
VEGFA-219ENST00000518824 MPNDQ8N594 471 aa16.96■□□□□ 0.31
VEGFA-219ENST00000518824 TTLL11Q8NHH1 800 aa16.96■□□□□ 0.31
VEGFA-219ENST00000518824 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
VEGFA-219ENST00000518824 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
VEGFA-219ENST00000518824 FZD9O00144 591 aa16.95■□□□□ 0.3
VEGFA-219ENST00000518824 RPS8P62241 208 aaKnown RBP16.95■□□□□ 0.3
VEGFA-219ENST00000518824 GPSM2P81274 684 aa16.95■□□□□ 0.3
VEGFA-219ENST00000518824 HNRNPUQ00839 825 aaKnown RBP eCLIP16.95■□□□□ 0.38e-7■□□□□ 10.9
VEGFA-219ENST00000518824 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
VEGFA-219ENST00000518824 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
VEGFA-219ENST00000518824 RTFDC1Q9BY42 306 aaPredicted RBP16.95■□□□□ 0.3
VEGFA-219ENST00000518824 GREM2Q9H772 168 aa16.95■□□□□ 0.3
VEGFA-219ENST00000518824 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
VEGFA-219ENST00000518824 DPP8Q6V1X1 898 aaPredicted RBP16.94■□□□□ 0.3
VEGFA-219ENST00000518824 LARGE2Q8N3Y3 721 aa16.94■□□□□ 0.3
VEGFA-219ENST00000518824 WTIPA6NIX2 430 aaPredicted RBP16.93■□□□□ 0.3
VEGFA-219ENST00000518824 PPIP5K2O43314 1243 aa16.93■□□□□ 0.3
VEGFA-219ENST00000518824 DPY19L2Q6NUT2 758 aa16.93■□□□□ 0.3
VEGFA-219ENST00000518824 PLA2G12BQ9BX93 195 aa16.93■□□□□ 0.3
VEGFA-219ENST00000518824 POLLQ9UGP5 575 aa16.93■□□□□ 0.3
VEGFA-219ENST00000518824 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
VEGFA-219ENST00000518824 FOXO4P98177 505 aa16.92■□□□□ 0.3
VEGFA-219ENST00000518824 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
VEGFA-219ENST00000518824 TOMM70O94826 608 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
VEGFA-219ENST00000518824 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 JDP2Q8WYK2 163 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 TMX4Q9H1E5 349 aaPredicted RBP16.91■□□□□ 0.3
VEGFA-219ENST00000518824 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
VEGFA-219ENST00000518824 GRM8O00222 908 aa16.9■□□□□ 0.3
VEGFA-219ENST00000518824 RIMBP2O15034 1052 aa16.9■□□□□ 0.3
VEGFA-219ENST00000518824 CSF1RP07333 972 aa16.9■□□□□ 0.3
VEGFA-219ENST00000518824 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
VEGFA-219ENST00000518824 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
VEGFA-219ENST00000518824 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
VEGFA-219ENST00000518824 RTL9Q8NET4 1388 aa16.89■□□□□ 0.3
VEGFA-219ENST00000518824 YDJCA8MPS7 323 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 NBPF7P0C2Y1 421 aaPredicted RBP16.89■□□□□ 0.29
VEGFA-219ENST00000518824 ITGA6P23229 1130 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 RARSP54136 660 aaKnown RBP16.89■□□□□ 0.29
VEGFA-219ENST00000518824 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 NIM1KQ8IY84 436 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 TBC1D16Q8TBP0 767 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 KAZALD1Q96I82 304 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 SUCLG2Q96I99 432 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 NOB1Q9ULX3 412 aaKnown RBP16.89■□□□□ 0.29
VEGFA-219ENST00000518824 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
VEGFA-219ENST00000518824 C6orf229H3BNL8 230 aa16.88■□□□□ 0.29
VEGFA-219ENST00000518824 C16orf71Q8IYS4 520 aaPredicted RBP16.88■□□□□ 0.29
VEGFA-219ENST00000518824 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
VEGFA-219ENST00000518824 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
VEGFA-219ENST00000518824 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
VEGFA-219ENST00000518824 KCNQ5Q9NR82 932 aa16.88■□□□□ 0.29
VEGFA-219ENST00000518824 PTPRCP08575 1304 aa16.88■□□□□ 0.29
VEGFA-219ENST00000518824 EIF6P56537 245 aaKnown RBP16.87■□□□□ 0.29
VEGFA-219ENST00000518824 CXCL9Q07325 125 aa16.87■□□□□ 0.29
VEGFA-219ENST00000518824 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
VEGFA-219ENST00000518824 C9orf78Q9NZ63 289 aaPredicted RBP16.87■□□□□ 0.29
VEGFA-219ENST00000518824 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
VEGFA-219ENST00000518824 TNNQ9UQP3 1299 aa16.87■□□□□ 0.29
VEGFA-219ENST00000518824 SCN4AP35499 1836 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 RAD17O75943 681 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 UFL1O94874 794 aa16.86■□□□□ 0.29
VEGFA-219ENST00000518824 CT47B1P0C2W7 299 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms