RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 UTP14AQ9BVJ6 771 aaKnown RBP16.34■□□□□ 0.21
TRAPPC9-204ENST00000518723 NEFMP07197 916 aa16.33■□□□□ 0.2
TRAPPC9-204ENST00000518723 NOGQ13253 232 aa16.33■□□□□ 0.2
TRAPPC9-204ENST00000518723 MPNDQ8N594 471 aa16.33■□□□□ 0.2
TRAPPC9-204ENST00000518723 TRPM4Q8TD43 1214 aa16.32■□□□□ 0.2
TRAPPC9-204ENST00000518723 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
TRAPPC9-204ENST00000518723 RAD17O75943 681 aa16.31■□□□□ 0.2
TRAPPC9-204ENST00000518723 PDIA6Q15084 440 aa16.31■□□□□ 0.2
TRAPPC9-204ENST00000518723 NFE2L2Q16236 605 aa16.31■□□□□ 0.2
TRAPPC9-204ENST00000518723 PLEKHF1Q96S99 279 aa16.31■□□□□ 0.2
TRAPPC9-204ENST00000518723 ZNF408Q9H9D4 720 aa16.31■□□□□ 0.2
TRAPPC9-204ENST00000518723 TNRC18O15417 2968 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC9-204ENST00000518723 DGKZQ13574 1117 aa16.3■□□□□ 0.2
TRAPPC9-204ENST00000518723 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
TRAPPC9-204ENST00000518723 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-204ENST00000518723 CNOT7Q9UIV1 285 aaKnown RBP16.3■□□□□ 0.2
TRAPPC9-204ENST00000518723 YDJCA8MPS7 323 aa16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 H7C1D1 291 aa16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 HUNKP57058 714 aa16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 GRAPQ13588 217 aa16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 TMC4Q7Z404 712 aa16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 GRAPLQ8TC17 118 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 DPF2Q92785 391 aa16.29■□□□□ 0.2
TRAPPC9-204ENST00000518723 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 CASP8AP2Q9UKL3 1982 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 DLG5Q8TDM6 1919 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 HSP90AB3PQ58FF7 597 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 DDX46Q7L014 1031 aaKnown RBP16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 MICALL2Q8IY33 904 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 ZIC5Q96T25 663 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 SAGE1Q9NXZ1 904 aa16.28■□□□□ 0.2
TRAPPC9-204ENST00000518723 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
TRAPPC9-204ENST00000518723 SHTN1A0MZ66 631 aa16.27■□□□□ 0.2
TRAPPC9-204ENST00000518723 HCLS1P14317 486 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC9-204ENST00000518723 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
TRAPPC9-204ENST00000518723 USP48Q86UV5 1035 aa16.27■□□□□ 0.2
TRAPPC9-204ENST00000518723 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.2
TRAPPC9-204ENST00000518723 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
TRAPPC9-204ENST00000518723 FAM155AB1AL88 458 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC9-204ENST00000518723 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
TRAPPC9-204ENST00000518723 SH3TC1Q8TE82 1336 aa16.25■□□□□ 0.19
TRAPPC9-204ENST00000518723 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
TRAPPC9-204ENST00000518723 RGMBQ6NW40 437 aa16.25■□□□□ 0.19
TRAPPC9-204ENST00000518723 CCDC102AQ96A19 550 aa16.25■□□□□ 0.19
TRAPPC9-204ENST00000518723 PNNQ9H307 717 aaKnown RBP16.25■□□□□ 0.19
TRAPPC9-204ENST00000518723 TRMT112Q9UI30 125 aaKnown RBP16.25■□□□□ 0.19
TRAPPC9-204ENST00000518723 LAMB2P55268 1798 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 PSMD14O00487 310 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 ANXA1P04083 346 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 RPS12P25398 132 aaKnown RBP16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 TCIRG1Q13488 830 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 COPS6Q7L5N1 327 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 SAMD7Q7Z3H4 446 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 KRT26Q7Z3Y9 468 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 ZBTB12Q9Y330 459 aaPredicted RBP16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 LRRC37AA6NMS7 1700 aa16.24■□□□□ 0.19
TRAPPC9-204ENST00000518723 MAPK8IP3Q9UPT6 1336 aa16.23■□□□□ 0.19
TRAPPC9-204ENST00000518723 WASHC4Q2M389 1173 aa16.23■□□□□ 0.19
TRAPPC9-204ENST00000518723 DLK2Q6UY11 383 aa16.23■□□□□ 0.19
TRAPPC9-204ENST00000518723 C2orf69Q8N8R5 385 aa16.23■□□□□ 0.19
TRAPPC9-204ENST00000518723 EGFRP00533 1210 aa16.22■□□□□ 0.19
TRAPPC9-204ENST00000518723 KIF23Q02241 960 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-204ENST00000518723 TBC1D10BQ4KMP7 808 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC9-204ENST00000518723 XAGE3Q8WTP9 111 aa16.22■□□□□ 0.19
TRAPPC9-204ENST00000518723 DCPSQ96C86 337 aaKnown RBP16.21■□□□□ 0.19
TRAPPC9-204ENST00000518723 DBNDD1Q9H9R9 158 aa16.21■□□□□ 0.19
TRAPPC9-204ENST00000518723 ADM5C9JUS6 153 aa16.2■□□□□ 0.18
TRAPPC9-204ENST00000518723 ZNF157P51786 506 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC9-204ENST00000518723 AIMP1Q12904 312 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-204ENST00000518723 SF3B3Q15393 1217 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-204ENST00000518723 RNF186Q9NXI6 227 aa16.2■□□□□ 0.18
TRAPPC9-204ENST00000518723 NSFL1CQ9UNZ2 370 aaKnown RBP16.2■□□□□ 0.18
TRAPPC9-204ENST00000518723 RTL9Q8NET4 1388 aa16.19■□□□□ 0.18
TRAPPC9-204ENST00000518723 SLC10A3P09131 477 aa16.19■□□□□ 0.18
TRAPPC9-204ENST00000518723 CELF1Q92879 486 aaKnown RBP16.19■□□□□ 0.18
TRAPPC9-204ENST00000518723 POLLQ9UGP5 575 aa16.19■□□□□ 0.18
TRAPPC9-204ENST00000518723 C6orf229H3BNL8 230 aa16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 ECE2O60344 883 aa16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 TRPA1O75762 1119 aa16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 RIPK4P57078 832 aa16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 GPSM2P81274 684 aa16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 REM2Q8IYK8 340 aaPredicted RBP16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 EYA3Q99504 573 aa16.18■□□□□ 0.18
TRAPPC9-204ENST00000518723 RIMBP2O15034 1052 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 VIL1P09327 827 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 SOX10P56693 466 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 CTU1Q7Z7A3 348 aaKnown RBP16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 CSRNP1Q96S65 589 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 ISCA1Q9BUE6 129 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 KCNQ5Q9NR82 932 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 GGA3Q9NZ52 723 aa16.17■□□□□ 0.18
TRAPPC9-204ENST00000518723 TAF1P21675 1872 aa16.16■□□□□ 0.18
TRAPPC9-204ENST00000518723 DOK7Q18PE1 504 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms