RNA–Protein interactions for RNA: ENST00000518699.3

NKX6-3-201, Transcript of NK6 homeobox 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX6-3, Length 1,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-201ENST00000518699 KAZALD1Q96I82 304 aa28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 SUCLG2Q96I99 432 aa28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 SUPT16HQ9Y5B9 1047 aaKnown RBP28.78■■■□□ 2.2
NKX6-3-201ENST00000518699 A0A0G2JLW4 131 aa28.77■■■□□ 2.2
NKX6-3-201ENST00000518699 CENPBP07199 599 aaPredicted RBP28.77■■■□□ 2.2
NKX6-3-201ENST00000518699 DDX19BQ9UMR2 479 aa28.77■■■□□ 2.2
NKX6-3-201ENST00000518699 HDAC5Q9UQL6 1122 aa28.77■■■□□ 2.2
NKX6-3-201ENST00000518699 COG6Q9Y2V7 657 aa28.77■■■□□ 2.2
NKX6-3-201ENST00000518699 FOXO4P98177 505 aa28.76■■■□□ 2.2
NKX6-3-201ENST00000518699 RPGRQ92834 1020 aaKnown RBP28.76■■■□□ 2.2
NKX6-3-201ENST00000518699 TAF1P21675 1872 aa28.76■■■□□ 2.19
NKX6-3-201ENST00000518699 ZBTB7BO15156 539 aaPredicted RBP28.75■■■□□ 2.19
NKX6-3-201ENST00000518699 CCDC152Q4G0S7 254 aa28.75■■■□□ 2.19
NKX6-3-201ENST00000518699 TTLL11Q8NHH1 800 aa28.75■■■□□ 2.19
NKX6-3-201ENST00000518699 CSF1RP07333 972 aa28.75■■■□□ 2.19
NKX6-3-201ENST00000518699 RABL6Q3YEC7 729 aaPredicted RBP28.75■■■□□ 2.19
NKX6-3-201ENST00000518699 EPHA10Q5JZY3 1008 aa28.75■■■□□ 2.19
NKX6-3-201ENST00000518699 SLX4Q8IY92 1834 aa28.74■■■□□ 2.19
NKX6-3-201ENST00000518699 COL4A1P02462 1669 aa28.74■■■□□ 2.19
NKX6-3-201ENST00000518699 CRAMP1Q96RY5 1269 aa28.74■■■□□ 2.19
NKX6-3-201ENST00000518699 CNKSR1Q969H4 720 aa28.73■■■□□ 2.19
NKX6-3-201ENST00000518699 RBM17Q96I25 401 aaKnown RBP28.73■■■□□ 2.19
NKX6-3-201ENST00000518699 BICC1Q9H694 974 aaKnown RBP28.73■■■□□ 2.19
NKX6-3-201ENST00000518699 PIM2Q9P1W9 311 aa28.73■■■□□ 2.19
NKX6-3-201ENST00000518699 SPEF2Q9C093 1822 aa28.72■■■□□ 2.19
NKX6-3-201ENST00000518699 LRRC37AA6NMS7 1700 aa28.72■■■□□ 2.19
NKX6-3-201ENST00000518699 ANKRD44Q8N8A2 993 aa28.72■■■□□ 2.19
NKX6-3-201ENST00000518699 ZNF622Q969S3 477 aaKnown RBP eCLIP28.72■■■□□ 2.19
NKX6-3-201ENST00000518699 CHMP4BQ9H444 224 aaKnown RBP28.72■■■□□ 2.19
NKX6-3-201ENST00000518699 LRRFIP2Q9Y608 721 aaKnown RBP28.72■■■□□ 2.19
NKX6-3-201ENST00000518699 DDX46Q7L014 1031 aaKnown RBP28.71■■■□□ 2.19
NKX6-3-201ENST00000518699 GNAI2P04899 355 aa28.7■■■□□ 2.18
NKX6-3-201ENST00000518699 ALDH1B1P30837 517 aa28.7■■■□□ 2.18
NKX6-3-201ENST00000518699 FAM161AQ3B820 660 aa28.7■■■□□ 2.18
NKX6-3-201ENST00000518699 LMBR1LQ6UX01 489 aa28.7■■■□□ 2.18
NKX6-3-201ENST00000518699 GREM2Q9H772 168 aa28.7■■■□□ 2.18
NKX6-3-201ENST00000518699 TTLL6Q8N841 843 aa28.69■■■□□ 2.18
NKX6-3-201ENST00000518699 GRAPQ13588 217 aa28.68■■■□□ 2.18
NKX6-3-201ENST00000518699 GRAPLQ8TC17 118 aaPredicted RBP28.68■■■□□ 2.18
NKX6-3-201ENST00000518699 DALRD3Q5D0E6 543 aaKnown RBP28.67■■■□□ 2.18
NKX6-3-201ENST00000518699 PRPF40BQ6NWY9 871 aaKnown RBP28.67■■■□□ 2.18
NKX6-3-201ENST00000518699 CCDC85AQ96PX6 553 aaPredicted RBP28.67■■■□□ 2.18
NKX6-3-201ENST00000518699 ZBTB40Q9NUA8 1239 aa28.67■■■□□ 2.18
NKX6-3-201ENST00000518699 ITGA6P23229 1130 aa28.65■■■□□ 2.18
NKX6-3-201ENST00000518699 MTX1Q13505 466 aa28.65■■■□□ 2.18
NKX6-3-201ENST00000518699 CDC5LQ99459 802 aaKnown RBP28.65■■■□□ 2.18
NKX6-3-201ENST00000518699 SEC31BQ9NQW1 1179 aa28.65■■■□□ 2.18
NKX6-3-201ENST00000518699 CELF1Q92879 486 aaKnown RBP28.64■■■□□ 2.18
NKX6-3-201ENST00000518699 CHMP3Q9Y3E7 222 aa28.64■■■□□ 2.18
NKX6-3-201ENST00000518699 A0A1B0GUL6 1792 aa28.64■■■□□ 2.18
NKX6-3-201ENST00000518699 IFIT5Q13325 482 aaKnown RBP28.63■■■□□ 2.17
NKX6-3-201ENST00000518699 CRBNQ96SW2 442 aa28.63■■■□□ 2.17
NKX6-3-201ENST00000518699 ANKRD18BA2A2Z9 1011 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 BBOX1O75936 387 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 CCDC57Q2TAC2 916 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 TMC4Q7Z404 712 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 C1orf115Q9H7X2 142 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 BCS1LQ9Y276 419 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 PPEF1O14829 653 aaPredicted RBP28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 WWC3Q9ULE0 1092 aa28.62■■■□□ 2.17
NKX6-3-201ENST00000518699 LTBP1Q14766 1721 aa28.61■■■□□ 2.17
NKX6-3-201ENST00000518699 FER1L6Q2WGJ9 1857 aa28.61■■■□□ 2.17
NKX6-3-201ENST00000518699 SNED1Q8TER0 1413 aa28.61■■■□□ 2.17
NKX6-3-201ENST00000518699 RPS8P62241 208 aaKnown RBP28.61■■■□□ 2.17
NKX6-3-201ENST00000518699 ANKRD18AQ8IVF6 992 aa28.61■■■□□ 2.17
NKX6-3-201ENST00000518699 C7orf43Q8WVR3 580 aa28.61■■■□□ 2.17
NKX6-3-201ENST00000518699 YBX3P16989 372 aaKnown RBP eCLIP28.58■■■□□ 2.17
NKX6-3-201ENST00000518699 RFX5P48382 616 aaPredicted RBP28.58■■■□□ 2.17
NKX6-3-201ENST00000518699 ATP6V0A2Q9Y487 856 aa28.58■■■□□ 2.17
NKX6-3-201ENST00000518699 IGHMBP2P38935 993 aaKnown RBP28.57■■■□□ 2.16
NKX6-3-201ENST00000518699 SOGA3Q5TF21 947 aa28.57■■■□□ 2.16
NKX6-3-201ENST00000518699 CEP85Q6P2H3 762 aa28.57■■■□□ 2.16
NKX6-3-201ENST00000518699 SRGAP3O43295 1099 aa28.56■■■□□ 2.16
NKX6-3-201ENST00000518699 AAMPQ13685 434 aa28.56■■■□□ 2.16
NKX6-3-201ENST00000518699 CC2D2BQ6DHV5 1058 aa28.56■■■□□ 2.16
NKX6-3-201ENST00000518699 BSDC1Q9NW68 430 aaPredicted RBP28.56■■■□□ 2.16
NKX6-3-201ENST00000518699 C21orf2O43822 256 aa28.55■■■□□ 2.16
NKX6-3-201ENST00000518699 TAF7LQ5H9L4 462 aa28.55■■■□□ 2.16
NKX6-3-201ENST00000518699 SP8Q8IXZ3 490 aa28.55■■■□□ 2.16
NKX6-3-201ENST00000518699 PNMA6EA0A0J9YXQ4 647 aa28.54■■■□□ 2.16
NKX6-3-201ENST00000518699 ATP8B2P98198 1209 aa28.54■■■□□ 2.16
NKX6-3-201ENST00000518699 DUOX1Q9NRD9 1551 aa28.54■■■□□ 2.16
NKX6-3-201ENST00000518699 POLA2Q14181 598 aa28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 CCDC93Q567U6 631 aa28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 RPAP2Q8IXW5 612 aaPredicted RBP28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 PELP1Q8IZL8 1130 aaKnown RBP28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 SSH3Q8TE77 659 aa28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 ZNF594Q96JF6 807 aaPredicted RBP28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 MPHOSPH8Q99549 860 aa28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 GOLGB1Q14789 3259 aaKnown RBP28.53■■■□□ 2.16
NKX6-3-201ENST00000518699 PTPN12Q05209 780 aaKnown RBP28.52■■■□□ 2.16
NKX6-3-201ENST00000518699 GPR162Q16538 588 aa28.52■■■□□ 2.16
NKX6-3-201ENST00000518699 GRIPAP1Q4V328 841 aa28.52■■■□□ 2.16
NKX6-3-201ENST00000518699 SLC51AQ86UW1 340 aa28.52■■■□□ 2.16
NKX6-3-201ENST00000518699 COPRSQ9NQ92 184 aa28.52■■■□□ 2.16
NKX6-3-201ENST00000518699 ZNF219Q9P2Y4 722 aaPredicted RBP28.51■■■□□ 2.16
NKX6-3-201ENST00000518699 OLFM4Q6UX06 510 aa28.5■■■□□ 2.15
NKX6-3-201ENST00000518699 EXOC6Q8TAG9 804 aa28.5■■■□□ 2.15
NKX6-3-201ENST00000518699 KLHDC4Q8TBB5 520 aa28.5■■■□□ 2.15
NKX6-3-201ENST00000518699 TMX4Q9H1E5 349 aaPredicted RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms