RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 CASZ1Q86V15 1759 aa13.01□□□□□ -0.33
SPIDR-204ENST00000517824 BCORQ6W2J9 1755 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 ZBTB7AO95365 584 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 MYCNP04198 464 aaPredicted RBP13□□□□□ -0.33
SPIDR-204ENST00000517824 PTGER2P43116 358 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 NEK4P51957 841 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 NUCB2P80303 420 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 TXNRD1Q16881 649 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 CWC27Q6UX04 472 aaKnown RBP13□□□□□ -0.33
SPIDR-204ENST00000517824 TTLL7Q6ZT98 887 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 LRP10Q7Z4F1 713 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 DNAJC10Q8IXB1 793 aa13□□□□□ -0.33
SPIDR-204ENST00000517824 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-204ENST00000517824 SGSM2O43147 1006 aa12.99□□□□□ -0.33
SPIDR-204ENST00000517824 MCM4P33991 863 aa12.99□□□□□ -0.33
SPIDR-204ENST00000517824 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-204ENST00000517824 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
SPIDR-204ENST00000517824 PIGBQ92521 554 aa12.99□□□□□ -0.33
SPIDR-204ENST00000517824 JARID2Q92833 1246 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-204ENST00000517824 KAZALD1Q96I82 304 aa12.99□□□□□ -0.33
SPIDR-204ENST00000517824 CCDC8Q9H0W5 538 aaPredicted RBP12.99□□□□□ -0.33
SPIDR-204ENST00000517824 CWC22Q9HCG8 908 aaKnown RBP12.99□□□□□ -0.33
SPIDR-204ENST00000517824 RFX7Q2KHR2 1363 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 SASH1O94885 1247 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 TNNI3KQ59H18 835 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 ATG3Q9NT62 314 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 FPGT-TNNI3KV9GXZ4 949 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 DDX60Q8IY21 1712 aaKnown RBP12.98□□□□□ -0.33
SPIDR-204ENST00000517824 ARAP2Q8WZ64 1704 aa12.98□□□□□ -0.33
SPIDR-204ENST00000517824 ZNF609O15014 1411 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 LAMA4Q16363 1823 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 MAP3K15Q6ZN16 1313 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 H7C1W4 665 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 CD2BP2O95400 341 aaKnown RBP12.97□□□□□ -0.33
SPIDR-204ENST00000517824 ZKSCAN1P17029 563 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-204ENST00000517824 TFCP2Q12800 502 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 SLC15A2Q16348 729 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 CCDC57Q2TAC2 916 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 RNF20Q5VTR2 975 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 KLHDC4Q8TBB5 520 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 EAF2Q96CJ1 260 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-204ENST00000517824 STK32BQ9NY57 414 aa12.97□□□□□ -0.33
SPIDR-204ENST00000517824 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
SPIDR-204ENST00000517824 HSPA4P34932 840 aa12.96□□□□□ -0.33
SPIDR-204ENST00000517824 IL15P40933 162 aaPredicted RBP12.96□□□□□ -0.33
SPIDR-204ENST00000517824 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
SPIDR-204ENST00000517824 ACSBG1Q96GR2 724 aa12.96□□□□□ -0.33
SPIDR-204ENST00000517824 BOLA2Q9H3K6 86 aa12.96□□□□□ -0.33
SPIDR-204ENST00000517824 CHD4Q14839 1912 aa12.96□□□□□ -0.34
SPIDR-204ENST00000517824 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
SPIDR-204ENST00000517824 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
SPIDR-204ENST00000517824 GORABQ5T7V8 394 aa12.95□□□□□ -0.34
SPIDR-204ENST00000517824 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
SPIDR-204ENST00000517824 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
SPIDR-204ENST00000517824 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
SPIDR-204ENST00000517824 MYH13Q9UKX3 1938 aa12.95□□□□□ -0.34
SPIDR-204ENST00000517824 CCDC171Q6TFL3 1326 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 CIAO1O76071 339 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 PCCAP05165 728 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-204ENST00000517824 ATP5JP18859 108 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 RFX5P48382 616 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-204ENST00000517824 CASP7P55210 303 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 NMIQ13287 307 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-204ENST00000517824 SKOR2Q2VWA4 1001 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-204ENST00000517824 TNPO1Q92973 898 aaKnown RBP12.94□□□□□ -0.34
SPIDR-204ENST00000517824 NEUROD6Q96NK8 337 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 ISCA1Q9BUE6 129 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 TLR7Q9NYK1 1049 aaKnown RBP12.94□□□□□ -0.34
SPIDR-204ENST00000517824 AKAP2Q9Y2D5 859 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 BTAF1O14981 1849 aa12.94□□□□□ -0.34
SPIDR-204ENST00000517824 EYA2O00167 538 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 DDIT3P35638 169 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 FOXO4P98177 505 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 IFIT5Q13325 482 aaKnown RBP12.93□□□□□ -0.34
SPIDR-204ENST00000517824 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
SPIDR-204ENST00000517824 SMARCC1Q92922 1105 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-204ENST00000517824 MTFR1LQ9H019 292 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 LSG1Q9H089 658 aaKnown RBP12.93□□□□□ -0.34
SPIDR-204ENST00000517824 GPR108Q9NPR9 543 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 CEP126Q9P2H0 1117 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 PALD1Q9ULE6 856 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 SCN7AQ01118 1682 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 NHSQ6T4R5 1651 aa12.93□□□□□ -0.34
SPIDR-204ENST00000517824 CDHR2Q9BYE9 1310 aa12.92□□□□□ -0.34
SPIDR-204ENST00000517824 HSP90B1P14625 803 aaKnown RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 PSMA5P28066 241 aa12.92□□□□□ -0.34
SPIDR-204ENST00000517824 PRIM1P49642 420 aaKnown RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 GIGYF2Q6Y7W6 1299 aaKnown RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 DZIP3Q86Y13 1208 aaKnown RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 SYT17Q9BSW7 474 aa12.92□□□□□ -0.34
SPIDR-204ENST00000517824 UPF3BQ9BZI7 483 aaKnown RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 FHDC1Q9C0D6 1143 aaPredicted RBP12.92□□□□□ -0.34
SPIDR-204ENST00000517824 MYH14Q7Z406 1995 aaKnown RBP12.91□□□□□ -0.34
SPIDR-204ENST00000517824 CYP19A1P11511 503 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms