RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 SPSB2Q99619 263 aa3.77□□□□□ -1.81
SKP1-204ENST00000517691 MST1RQ04912 1400 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 CNTNAP5Q8WYK1 1306 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 RALGAPBQ86X10 1494 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 GPRASP1Q5JY77 1395 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 BRD1O95696 1058 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 LMOD1P29536 600 aaPredicted RBP3.76□□□□□ -1.81
SKP1-204ENST00000517691 EIF4G2P78344 907 aaKnown RBP eCLIP3.76□□□□□ -1.81
SKP1-204ENST00000517691 LRRC59Q96AG4 307 aaKnown RBP3.76□□□□□ -1.81
SKP1-204ENST00000517691 CABP1Q9NZU7 370 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 KIAA1522Q9P206 1035 aaPredicted RBP3.76□□□□□ -1.81
SKP1-204ENST00000517691 IVNS1ABPQ9Y6Y0 642 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 DLC1Q96QB1 1528 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 NPHP3Q7Z494 1330 aa3.76□□□□□ -1.81
SKP1-204ENST00000517691 SETD1AO15047 1707 aaKnown RBP3.76□□□□□ -1.81
SKP1-204ENST00000517691 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.76□□□□□ -1.81
SKP1-204ENST00000517691 USP47Q96K76 1375 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 HSPA5P11021 654 aaKnown RBP3.75□□□□□ -1.81
SKP1-204ENST00000517691 SOX11P35716 441 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 TMF1P82094 1093 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 CDCA8Q53HL2 280 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 TAF7LQ5H9L4 462 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 MEX3CQ5U5Q3 659 aaKnown RBP3.75□□□□□ -1.81
SKP1-204ENST00000517691 BRICD5Q6PL45 260 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 TBC1D9Q6ZT07 1266 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 ZNF592Q92610 1267 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 PRR36Q9H6K5 1346 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 Q3C1V9 767 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 MRPL14Q6P1L8 145 aaKnown RBP3.75□□□□□ -1.81
SKP1-204ENST00000517691 TMED8Q6PL24 325 aaPredicted RBP3.75□□□□□ -1.81
SKP1-204ENST00000517691 SND1Q7KZF4 910 aaKnown RBP eCLIP3.75□□□□□ -1.813e-12■■□□□ 11.8
SKP1-204ENST00000517691 USTQ9Y2C2 406 aa3.75□□□□□ -1.81
SKP1-204ENST00000517691 MAFBQ9Y5Q3 323 aaPredicted RBP3.75□□□□□ -1.81
SKP1-204ENST00000517691 TRPM1Q7Z4N2 1603 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 ACEP12821 1306 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 XIRP1Q702N8 1843 aaKnown RBP3.74□□□□□ -1.81
SKP1-204ENST00000517691 KIAA1210Q9ULL0 1709 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 ANKARQ7Z5J8 1434 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 KRBA1A5PL33 1030 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 TMEM88BA6NKF7 163 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 PATL2C9JE40 543 aaKnown RBP3.74□□□□□ -1.81
SKP1-204ENST00000517691 MAN1A2O60476 641 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 ATG7O95352 703 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 FBXO45P0C2W1 286 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 TRIM32Q13049 653 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 SEMA3FQ13275 785 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 NUTM2GQ5VZR2 741 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 TESK2Q96S53 571 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 USB1Q9BQ65 265 aaKnown RBP3.74□□□□□ -1.81
SKP1-204ENST00000517691 SLC12A5Q9H2X9 1139 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 SALL2Q9Y467 1007 aaPredicted RBP3.74□□□□□ -1.81
SKP1-204ENST00000517691 NALCNQ8IZF0 1738 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 JCADQ9P266 1359 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 CDC42BPGQ6DT37 1551 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 PPIP5K1Q6PFW1 1433 aa3.74□□□□□ -1.81
SKP1-204ENST00000517691 PIK3CDO00329 1044 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 ATP9BO43861 1147 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 ADAMTS2O95450 1211 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 F12P00748 615 aaPredicted RBP3.73□□□□□ -1.81
SKP1-204ENST00000517691 CSB-PGBD3P0DP91 1061 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 ZEB1P37275 1124 aaPredicted RBP3.73□□□□□ -1.81
SKP1-204ENST00000517691 NR1H3Q13133 447 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 LYPD4Q6UWN0 246 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 HDGFL2Q7Z4V5 671 aaPredicted RBP3.73□□□□□ -1.81
SKP1-204ENST00000517691 ABTB2Q8N961 1025 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 ROBO1Q9Y6N7 1651 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 KNDC1Q76NI1 1749 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 SOS2Q07890 1332 aaPredicted RBP3.73□□□□□ -1.81
SKP1-204ENST00000517691 RBM47A0AV96 593 aaKnown RBP3.73□□□□□ -1.81
SKP1-204ENST00000517691 IRX6P78412 446 aaPredicted RBP3.73□□□□□ -1.81
SKP1-204ENST00000517691 RNFT1Q5M7Z0 435 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.73□□□□□ -1.81
SKP1-204ENST00000517691 SPATA32Q96LK8 384 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 TERF2IPQ9NYB0 399 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 FKBPLQ9UIM3 349 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 TULP4Q9NRJ4 1543 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 SPATA31A3Q5VYP0 1347 aa3.73□□□□□ -1.81
SKP1-204ENST00000517691 ATAD2Q6PL18 1390 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 DISP3Q9P2K9 1392 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 ZBBXA8MT70 800 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 ALDH1A1P00352 501 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 CELA2BP08218 269 aaPredicted RBP3.72□□□□□ -1.81
SKP1-204ENST00000517691 PNMA1Q8ND90 353 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 MRRFQ96E11 262 aaKnown RBP3.72□□□□□ -1.81
SKP1-204ENST00000517691 NGLY1Q96IV0 654 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 C8orf37Q96NL8 207 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 MAP10Q9P2G4 905 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 SPATA31A6Q5VVP1 1343 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 KTN1Q86UP2 1357 aaKnown RBP3.72□□□□□ -1.81
SKP1-204ENST00000517691 SBNO2Q9Y2G9 1366 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 ARHGEF28Q8N1W1 1705 aaKnown RBP3.72□□□□□ -1.81
SKP1-204ENST00000517691 ATP7BP35670 1465 aa3.72□□□□□ -1.81
SKP1-204ENST00000517691 NLRP13Q86W25 1043 aa3.71□□□□□ -1.81
SKP1-204ENST00000517691 OCSTAMPQ9BR26 566 aa3.71□□□□□ -1.81
SKP1-204ENST00000517691 VRTNQ9H8Y1 702 aa3.71□□□□□ -1.81
SKP1-204ENST00000517691 PHLPP1O60346 1717 aa3.71□□□□□ -1.81
SKP1-204ENST00000517691 SBNO1A3KN83 1393 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 POLR3AO14802 1390 aaPredicted RBP3.71□□□□□ -1.82
SKP1-204ENST00000517691 ARHGEF10O15013 1369 aa3.71□□□□□ -1.82
SKP1-204ENST00000517691 PNPLA6Q8IY17 1366 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms