RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 C16orf71Q8IYS4 520 aaPredicted RBP14.28□□□□□ -0.12
SCARNA16.1-201ENST00000516133 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
SCARNA16.1-201ENST00000516133 VPS33BQ9H267 617 aa14.28□□□□□ -0.12
SCARNA16.1-201ENST00000516133 RRAGCQ9HB90 399 aa14.28□□□□□ -0.12
SCARNA16.1-201ENST00000516133 CCDC88AQ3V6T2 1871 aa14.27□□□□□ -0.12
SCARNA16.1-201ENST00000516133 CDHR2Q9BYE9 1310 aa14.27□□□□□ -0.12
SCARNA16.1-201ENST00000516133 RPS8P62241 208 aaKnown RBP14.27□□□□□ -0.13
SCARNA16.1-201ENST00000516133 GCKRQ14397 625 aa14.27□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CWF19L2Q2TBE0 894 aaKnown RBP14.27□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CCDC152Q4G0S7 254 aa14.27□□□□□ -0.13
SCARNA16.1-201ENST00000516133 TRMT2AQ8IZ69 625 aaKnown RBP14.27□□□□□ -0.13
SCARNA16.1-201ENST00000516133 SUPT20HQ8NEM7 779 aa14.27□□□□□ -0.13
SCARNA16.1-201ENST00000516133 H7C1W4 665 aa14.26□□□□□ -0.13
SCARNA16.1-201ENST00000516133 DPP8Q6V1X1 898 aaPredicted RBP14.26□□□□□ -0.13
SCARNA16.1-201ENST00000516133 MPNDQ8N594 471 aa14.26□□□□□ -0.13
SCARNA16.1-201ENST00000516133 JARID2Q92833 1246 aaPredicted RBP14.26□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CDCA7LQ96GN5 454 aa14.26□□□□□ -0.13
SCARNA16.1-201ENST00000516133 SNED1Q8TER0 1413 aa14.25□□□□□ -0.13
SCARNA16.1-201ENST00000516133 LARGE2Q8N3Y3 721 aa14.25□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CELF1Q92879 486 aaKnown RBP14.25□□□□□ -0.13
SCARNA16.1-201ENST00000516133 RTFDC1Q9BY42 306 aaPredicted RBP14.25□□□□□ -0.13
SCARNA16.1-201ENST00000516133 DICER1Q9UPY3 1922 aaKnown RBP14.24□□□□□ -0.13
SCARNA16.1-201ENST00000516133 FZD9O00144 591 aa14.24□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CT47B1P0C2W7 299 aaPredicted RBP14.24□□□□□ -0.13
SCARNA16.1-201ENST00000516133 UBE3BQ7Z3V4 1068 aa14.24□□□□□ -0.13
SCARNA16.1-201ENST00000516133 F6X3S4 739 aa14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 DDNO94850 711 aaPredicted RBP14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CTSWP56202 376 aa14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 ALDH1L2Q3SY69 923 aa14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 BEND3Q5T5X7 828 aa14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 TTLL11Q8NHH1 800 aa14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 RBM46Q8TBY0 533 aaKnown RBP14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 NSFL1CQ9UNZ2 370 aaKnown RBP14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 DDX60Q8IY21 1712 aaKnown RBP14.23□□□□□ -0.13
SCARNA16.1-201ENST00000516133 LAMB2P55268 1798 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 IQCA1LA6NCM1 817 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 PPIP5K2O43314 1243 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 EIF6P56537 245 aaKnown RBP14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 NIM1KQ8IY84 436 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 SSH1Q8WYL5 1049 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CDC5LQ99459 802 aaKnown RBP14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 PLA2G12BQ9BX93 195 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
SCARNA16.1-201ENST00000516133 PTPRCP08575 1304 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 POTECB2RU33 542 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 ALDH1L1O75891 902 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 SLC4A10Q6U841 1118 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 SLC51AQ86UW1 340 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 ANKRD18AQ8IVF6 992 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 GPC2Q8N158 579 aa14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 L3MBTL3Q96JM7 780 aaPredicted RBP14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CCDC85AQ96PX6 553 aaPredicted RBP14.21□□□□□ -0.13
SCARNA16.1-201ENST00000516133 CASP7P55210 303 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 KIAA2012Q0VF49 1180 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 FSTL1Q12841 308 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 AOC3Q16853 763 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 SRCIN1Q9C0H9 1055 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 C9orf78Q9NZ63 289 aaPredicted RBP14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 ZNRF3Q9ULT6 936 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 TIAM2Q8IVF5 1701 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 RTL9Q8NET4 1388 aa14.2□□□□□ -0.14
SCARNA16.1-201ENST00000516133 C6orf229H3BNL8 230 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 GRM8O00222 908 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 CSF1RP07333 972 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 HSPA6P17066 643 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 GPSM2P81274 684 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 WASHC4Q2M389 1173 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 SMC1BQ8NDV3 1235 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 EYA3Q99504 573 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 GREM2Q9H772 168 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 BSDC1Q9NW68 430 aaPredicted RBP14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 PODXL2Q9NZ53 605 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 ANKIB1Q9P2G1 1089 aa14.19□□□□□ -0.14
SCARNA16.1-201ENST00000516133 TAF1P21675 1872 aa14.18□□□□□ -0.14
SCARNA16.1-201ENST00000516133 ZNF541Q9H0D2 1346 aa14.18□□□□□ -0.14
SCARNA16.1-201ENST00000516133 HNRNPUQ00839 825 aaKnown RBP eCLIP14.18□□□□□ -0.14
SCARNA16.1-201ENST00000516133 SMC4Q9NTJ3 1288 aa14.18□□□□□ -0.14
SCARNA16.1-201ENST00000516133 POLLQ9UGP5 575 aa14.18□□□□□ -0.14
SCARNA16.1-201ENST00000516133 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 BRPF1P55201 1214 aaPredicted RBP14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 TNIP1Q15025 636 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 TBC1D16Q8TBP0 767 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 BCL2L13Q9BXK5 485 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 ZC3H12CQ9C0D7 883 aaKnown RBP14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 HACL1Q9UJ83 578 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 GJA3Q9Y6H8 435 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 CEP350Q5VT06 3117 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 WDR90Q96KV7 1748 aa14.17□□□□□ -0.14
SCARNA16.1-201ENST00000516133 ITGA6P23229 1130 aa14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 FOXO4P98177 505 aa14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 CXCL9Q07325 125 aa14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 IFIT5Q13325 482 aaKnown RBP14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 PNMA8AQ86V59 439 aaPredicted RBP14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 MPHOSPH8Q99549 860 aa14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 TAF1DQ9H5J8 278 aaPredicted RBP14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 GGA1Q9UJY5 639 aa14.16□□□□□ -0.14
SCARNA16.1-201ENST00000516133 XDHP47989 1333 aa14.15□□□□□ -0.14
SCARNA16.1-201ENST00000516133 ANKRD18BA2A2Z9 1011 aa14.15□□□□□ -0.14
SCARNA16.1-201ENST00000516133 UFL1O94874 794 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms