RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 USPL1Q5W0Q7 1092 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 LDHAL6AQ6ZMR3 332 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 SKAP1Q86WV1 359 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 NBPF5PQ86XG9 351 aaPredicted RBP11.58□□□□□ -0.56
TPM3-222ENST00000515609 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 BCL11AQ9H165 835 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 PA2G4Q9UQ80 394 aaKnown RBP11.58□□□□□ -0.56
TPM3-222ENST00000515609 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 TAF1LQ8IZX4 1826 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 UBN2Q6ZU65 1347 aa11.58□□□□□ -0.56
TPM3-222ENST00000515609 RGPD3A6NKT7 1758 aaPredicted RBP11.57□□□□□ -0.56
TPM3-222ENST00000515609 RGPD4Q7Z3J3 1758 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 SCN7AQ01118 1682 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.57□□□□□ -0.56
TPM3-222ENST00000515609 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 NTSR2O95665 410 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 ITGA6P23229 1130 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
TPM3-222ENST00000515609 CCDC125Q86Z20 511 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
TPM3-222ENST00000515609 NLGN1Q8N2Q7 840 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 RUFY2Q8WXA3 655 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 JARID2Q92833 1246 aaPredicted RBP11.57□□□□□ -0.56
TPM3-222ENST00000515609 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 MPHOSPH8Q99549 860 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 CNNM1Q9NRU3 951 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 TFCP2L1Q9NZI6 479 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 MROH5Q6ZUA9 1318 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 SALL3Q9BXA9 1300 aa11.57□□□□□ -0.56
TPM3-222ENST00000515609 EPB41L2O43491 1005 aaKnown RBP11.56□□□□□ -0.56
TPM3-222ENST00000515609 SASH1O94885 1247 aa11.56□□□□□ -0.56
TPM3-222ENST00000515609 BAG6P46379 1132 aa11.56□□□□□ -0.56
TPM3-222ENST00000515609 SF3B3Q15393 1217 aaKnown RBP11.56□□□□□ -0.56
TPM3-222ENST00000515609 TNNI3KQ59H18 835 aa11.56□□□□□ -0.56
TPM3-222ENST00000515609 GORABQ5T7V8 394 aa11.56□□□□□ -0.56
TPM3-222ENST00000515609 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
TPM3-222ENST00000515609 DAXXQ9UER7 740 aaPredicted RBP11.56□□□□□ -0.56
TPM3-222ENST00000515609 FPGT-TNNI3KV9GXZ4 949 aa11.56□□□□□ -0.56
TPM3-222ENST00000515609 PHF14O94880 888 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 SDSP20132 328 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 KCNQ4P56696 695 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 ST5P78524 1137 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 TFCP2Q12800 502 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 CCDC158Q5M9N0 1113 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 POTEAQ6S8J7 498 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 NUTM1Q86Y26 1132 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 EVI5LQ96CN4 794 aa11.55□□□□□ -0.56
TPM3-222ENST00000515609 RGS17Q9UGC6 210 aaPredicted RBP11.55□□□□□ -0.56
TPM3-222ENST00000515609 MYH3P11055 1940 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 ATP5JP18859 108 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 METTL24Q5JXM2 366 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 TBC1D9BQ66K14 1250 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 BICDL1Q6ZP65 573 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 RILPL2Q969X0 211 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 GREM2Q9H772 168 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
TPM3-222ENST00000515609 RIC1Q4ADV7 1423 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 FAM177BA6PVY3 158 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 HCLS1P14317 486 aaPredicted RBP11.53□□□□□ -0.56
TPM3-222ENST00000515609 GSPT1P15170 499 aaKnown RBP11.53□□□□□ -0.56
TPM3-222ENST00000515609 MCCP23508 829 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 TBC1D9Q6ZT07 1266 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 ATG9AQ7Z3C6 839 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 OTUD7AQ8TE49 926 aaPredicted RBP11.53□□□□□ -0.56
TPM3-222ENST00000515609 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3-222ENST00000515609 EAF2Q96CJ1 260 aaPredicted RBP11.53□□□□□ -0.56
TPM3-222ENST00000515609 NEUROD6Q96NK8 337 aa11.53□□□□□ -0.56
TPM3-222ENST00000515609 LAMB2P55268 1798 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 BECN1Q14457 450 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 PUM3Q15397 648 aaKnown RBP11.52□□□□□ -0.57
TPM3-222ENST00000515609 ERFEQ4G0M1 354 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 KIAA1211Q6ZU35 1233 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 DDX46Q7L014 1031 aaKnown RBP11.52□□□□□ -0.57
TPM3-222ENST00000515609 PI4K2BQ8TCG2 481 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 BCL2L12Q9HB09 334 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 DIAPH3Q9NSV4 1193 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 STK32BQ9NY57 414 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.57
TPM3-222ENST00000515609 RIPOR2Q9Y4F9 1068 aa11.52□□□□□ -0.57
TPM3-222ENST00000515609 A0A1B0GUL7 405 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 MSH5O43196 834 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 PDE8BO95263 885 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
TPM3-222ENST00000515609 UQCRFS1P1P0C7P4 283 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 GYS1P13807 737 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 SLC5A1P13866 664 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 MFAP1P55081 439 aaKnown RBP11.51□□□□□ -0.57
TPM3-222ENST00000515609 ATP2B3Q16720 1220 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 TMC4Q7Z404 712 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 LPIN2Q92539 896 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 C22orf23Q9BZE7 217 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 ANKRD2Q9GZV1 360 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
TPM3-222ENST00000515609 RFX7Q2KHR2 1363 aa11.51□□□□□ -0.57
TPM3-222ENST00000515609 COL24A1Q17RW2 1714 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms