RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 EPHX2P34913 555 aa22.55■■□□□ 1.2
DDX41-217ENST00000515562 PNMA8AQ86V59 439 aaPredicted RBP22.55■■□□□ 1.2
DDX41-217ENST00000515562 IL16Q14005 1332 aa22.55■■□□□ 1.2
DDX41-217ENST00000515562 HSP90B1P14625 803 aaKnown RBP22.54■■□□□ 1.2
DDX41-217ENST00000515562 SF3B3Q15393 1217 aaKnown RBP22.54■■□□□ 1.2
DDX41-217ENST00000515562 EAPPQ56P03 285 aaPredicted RBP22.54■■□□□ 1.2
DDX41-217ENST00000515562 JMYQ8N9B5 988 aa22.54■■□□□ 1.2
DDX41-217ENST00000515562 TSR2Q969E8 191 aaKnown RBP22.54■■□□□ 1.2
DDX41-217ENST00000515562 ZNF428Q96B54 188 aa22.54■■□□□ 1.2
DDX41-217ENST00000515562 AOC3Q16853 763 aa22.53■■□□□ 1.2
DDX41-217ENST00000515562 MPNDQ8N594 471 aa22.53■■□□□ 1.2
DDX41-217ENST00000515562 ZBTB38Q8NAP3 1195 aaPredicted RBP22.53■■□□□ 1.2
DDX41-217ENST00000515562 GJA3Q9Y6H8 435 aa22.53■■□□□ 1.2
DDX41-217ENST00000515562 TAF1P21675 1872 aa22.53■■□□□ 1.2
DDX41-217ENST00000515562 IRS4O14654 1257 aaPredicted RBP22.52■■□□□ 1.2
DDX41-217ENST00000515562 LMOD1P29536 600 aaPredicted RBP22.52■■□□□ 1.2
DDX41-217ENST00000515562 TSPYL6Q8N831 410 aa22.52■■□□□ 1.2
DDX41-217ENST00000515562 CCDC191Q8NCU4 936 aa22.52■■□□□ 1.2
DDX41-217ENST00000515562 MYD88Q99836 296 aa22.52■■□□□ 1.2
DDX41-217ENST00000515562 STK31Q9BXU1 1019 aa22.52■■□□□ 1.2
DDX41-217ENST00000515562 DUOX1Q9NRD9 1551 aa22.51■■□□□ 1.19
DDX41-217ENST00000515562 RTL5Q5HYW3 569 aaPredicted RBP22.51■■□□□ 1.19
DDX41-217ENST00000515562 CREBZFQ9NS37 354 aa22.51■■□□□ 1.19
DDX41-217ENST00000515562 KIAA2012Q0VF49 1180 aa22.5■■□□□ 1.19
DDX41-217ENST00000515562 METTL22Q9BUU2 404 aaPredicted RBP22.5■■□□□ 1.19
DDX41-217ENST00000515562 ZNRF3Q9ULT6 936 aa22.5■■□□□ 1.19
DDX41-217ENST00000515562 LTBP1Q14766 1721 aa22.5■■□□□ 1.19
DDX41-217ENST00000515562 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
DDX41-217ENST00000515562 CWC25Q9NXE8 425 aaPredicted RBP22.49■■□□□ 1.19
DDX41-217ENST00000515562 CLEC11AQ9Y240 323 aa22.49■■□□□ 1.19
DDX41-217ENST00000515562 PASKQ96RG2 1323 aa22.49■■□□□ 1.19
DDX41-217ENST00000515562 PCCAP05165 728 aaPredicted RBP22.48■■□□□ 1.19
DDX41-217ENST00000515562 SCNN1DP51172 638 aa22.48■■□□□ 1.19
DDX41-217ENST00000515562 CELF1Q92879 486 aaKnown RBP22.48■■□□□ 1.19
DDX41-217ENST00000515562 KSR2Q6VAB6 950 aa22.47■■□□□ 1.19
DDX41-217ENST00000515562 MAP3K2Q9Y2U5 619 aa22.47■■□□□ 1.19
DDX41-217ENST00000515562 FANCIQ9NVI1 1328 aa22.46■■□□□ 1.19
DDX41-217ENST00000515562 COL4A1P02462 1669 aa22.46■■□□□ 1.19
DDX41-217ENST00000515562 ITGBL1O95965 494 aaPredicted RBP22.45■■□□□ 1.18
DDX41-217ENST00000515562 NEXNQ0ZGT2 675 aa22.45■■□□□ 1.18
DDX41-217ENST00000515562 CCDC152Q4G0S7 254 aa22.45■■□□□ 1.18
DDX41-217ENST00000515562 WDR63Q8IWG1 891 aa22.45■■□□□ 1.18
DDX41-217ENST00000515562 CDHR2Q9BYE9 1310 aa22.45■■□□□ 1.18
DDX41-217ENST00000515562 PI4KAP2A4QPH2 592 aa22.44■■□□□ 1.18
DDX41-217ENST00000515562 PDE8AO60658 829 aa22.44■■□□□ 1.18
DDX41-217ENST00000515562 RPS8P62241 208 aaKnown RBP22.44■■□□□ 1.18
DDX41-217ENST00000515562 CXCL9Q07325 125 aa22.44■■□□□ 1.18
DDX41-217ENST00000515562 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
DDX41-217ENST00000515562 PI4KAP1Q8N8J0 262 aa22.44■■□□□ 1.18
DDX41-217ENST00000515562 NSFL1CQ9UNZ2 370 aaKnown RBP22.44■■□□□ 1.18
DDX41-217ENST00000515562 EPS15P42566 896 aa22.43■■□□□ 1.18
DDX41-217ENST00000515562 TNIP1Q15025 636 aa22.43■■□□□ 1.18
DDX41-217ENST00000515562 MAP1SQ66K74 1059 aaPredicted RBP22.43■■□□□ 1.18
DDX41-217ENST00000515562 CIAPIN1Q6FI81 312 aa22.43■■□□□ 1.18
DDX41-217ENST00000515562 CNTROBQ8N137 903 aa22.43■■□□□ 1.18
DDX41-217ENST00000515562 GPRC5DQ9NZD1 345 aa22.43■■□□□ 1.18
DDX41-217ENST00000515562 CACNA1FO60840 1977 aa22.42■■□□□ 1.18
DDX41-217ENST00000515562 TMEM88BA6NKF7 163 aa22.42■■□□□ 1.18
DDX41-217ENST00000515562 WASHC4Q2M389 1173 aa22.42■■□□□ 1.18
DDX41-217ENST00000515562 SLC4A2P04920 1241 aa22.41■■□□□ 1.18
DDX41-217ENST00000515562 EYA3Q99504 573 aa22.41■■□□□ 1.18
DDX41-217ENST00000515562 ADARB2Q9NS39 739 aaKnown RBP22.41■■□□□ 1.18
DDX41-217ENST00000515562 CNTNAP1P78357 1384 aa22.4■■□□□ 1.18
DDX41-217ENST00000515562 MYH3P11055 1940 aa22.4■■□□□ 1.18
DDX41-217ENST00000515562 C6orf229H3BNL8 230 aa22.4■■□□□ 1.18
DDX41-217ENST00000515562 IGKV5-2P06315 115 aa22.4■■□□□ 1.18
DDX41-217ENST00000515562 GMPSP49915 693 aaPredicted RBP22.4■■□□□ 1.18
DDX41-217ENST00000515562 GPSM2P81274 684 aa22.4■■□□□ 1.18
DDX41-217ENST00000515562 IFFO2Q5TF58 517 aa22.4■■□□□ 1.18
DDX41-217ENST00000515562 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
DDX41-217ENST00000515562 RAD17O75943 681 aa22.39■■□□□ 1.17
DDX41-217ENST00000515562 FLIIQ13045 1269 aa22.39■■□□□ 1.17
DDX41-217ENST00000515562 SEC31BQ9NQW1 1179 aa22.39■■□□□ 1.17
DDX41-217ENST00000515562 PODXL2Q9NZ53 605 aa22.39■■□□□ 1.17
DDX41-217ENST00000515562 MKRN1Q9UHC7 482 aaKnown RBP22.39■■□□□ 1.17
DDX41-217ENST00000515562 YDJCA8MPS7 323 aa22.38■■□□□ 1.17
DDX41-217ENST00000515562 CTSWP56202 376 aa22.38■■□□□ 1.17
DDX41-217ENST00000515562 G2E3Q7L622 706 aa22.38■■□□□ 1.17
DDX41-217ENST00000515562 BCL2L13Q9BXK5 485 aa22.38■■□□□ 1.17
DDX41-217ENST00000515562 POLLQ9UGP5 575 aa22.38■■□□□ 1.17
DDX41-217ENST00000515562 PCNTO95613 3336 aa22.37■■□□□ 1.17
DDX41-217ENST00000515562 NEURL1BA8MQ27 555 aa22.37■■□□□ 1.17
DDX41-217ENST00000515562 CWF19L2Q2TBE0 894 aaKnown RBP22.37■■□□□ 1.17
DDX41-217ENST00000515562 ANKRD18AQ8IVF6 992 aa22.37■■□□□ 1.17
DDX41-217ENST00000515562 FAM9BQ8IZU0 186 aa22.37■■□□□ 1.17
DDX41-217ENST00000515562 TBC1D16Q8TBP0 767 aa22.37■■□□□ 1.17
DDX41-217ENST00000515562 JARID2Q92833 1246 aaPredicted RBP22.37■■□□□ 1.17
DDX41-217ENST00000515562 MYH16Q9H6N6 1097 aa22.37■■□□□ 1.17
DDX41-217ENST00000515562 FKBP5Q13451 457 aaPredicted RBP22.36■■□□□ 1.17
DDX41-217ENST00000515562 CDC5LQ99459 802 aaKnown RBP22.36■■□□□ 1.17
DDX41-217ENST00000515562 DBNDD1Q9H9R9 158 aa22.36■■□□□ 1.17
DDX41-217ENST00000515562 ANKIB1Q9P2G1 1089 aa22.36■■□□□ 1.17
DDX41-217ENST00000515562 RTL9Q8NET4 1388 aa22.36■■□□□ 1.17
DDX41-217ENST00000515562 RIMBP2O15034 1052 aa22.35■■□□□ 1.17
DDX41-217ENST00000515562 VAMP4O75379 141 aa22.35■■□□□ 1.17
DDX41-217ENST00000515562 HSPA1AP0DMV8 641 aaKnown RBP22.35■■□□□ 1.17
DDX41-217ENST00000515562 HSPA1BP0DMV9 641 aaKnown RBP22.35■■□□□ 1.17
DDX41-217ENST00000515562 EXOSC9Q06265 439 aaKnown RBP22.35■■□□□ 1.17
DDX41-217ENST00000515562 CCDC85AQ96PX6 553 aaPredicted RBP22.35■■□□□ 1.17
DDX41-217ENST00000515562 GGA1Q9UJY5 639 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 1280.4 ms