RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-279	ENST00000515529	GRM8	O00222	908 aa		32.81	■■■□□ 2.84
DDR1-279	ENST00000515529	CTSW	P56202	376 aa		32.81	■■■□□ 2.84
DDR1-279	ENST00000515529	CC2D2B	Q6DHV5	1058 aa		32.81	■■■□□ 2.84
DDR1-279	ENST00000515529	C7orf43	Q8WVR3	580 aa		32.81	■■■□□ 2.84
DDR1-279	ENST00000515529	ARHGAP45	Q92619	1136 aa		32.81	■■■□□ 2.84
DDR1-279	ENST00000515529	RASSF7	Q02833	373 aa		32.8	■■■□□ 2.84
DDR1-279	ENST00000515529	RTKN2	Q8IZC4	609 aa		32.8	■■■□□ 2.84
DDR1-279	ENST00000515529	CCT4	P50991	539 aa	Known RBP	32.79	■■■□□ 2.84
DDR1-279	ENST00000515529	CCDC85A	Q96PX6	553 aa	Predicted RBP	32.79	■■■□□ 2.84
DDR1-279	ENST00000515529	TAOK3	Q9H2K8	898 aa		32.79	■■■□□ 2.84
DDR1-279	ENST00000515529	UTRN	P46939	3433 aa		32.79	■■■□□ 2.84
DDR1-279	ENST00000515529	CASP7	P55210	303 aa		32.78	■■■□□ 2.84
DDR1-279	ENST00000515529	TMC4	Q7Z404	712 aa		32.78	■■■□□ 2.84
DDR1-279	ENST00000515529	PLA2G12B	Q9BX93	195 aa		32.78	■■■□□ 2.84
DDR1-279	ENST00000515529	NFKBIE	O00221	500 aa		32.77	■■■□□ 2.84
DDR1-279	ENST00000515529	GRIPAP1	Q4V328	841 aa		32.77	■■■□□ 2.84
DDR1-279	ENST00000515529	C9orf131	Q5VYM1	1079 aa		32.76	■■■□□ 2.83
DDR1-279	ENST00000515529	OLFM4	Q6UX06	510 aa		32.76	■■■□□ 2.83
DDR1-279	ENST00000515529	RNF181	Q9P0P0	153 aa		32.76	■■■□□ 2.83
DDR1-279	ENST00000515529	ATP6V0A2	Q9Y487	856 aa		32.76	■■■□□ 2.83
DDR1-279	ENST00000515529	LMNB1	P20700	586 aa		32.75	■■■□□ 2.83
DDR1-279	ENST00000515529	TTLL11	Q8NHH1	800 aa		32.75	■■■□□ 2.83
DDR1-279	ENST00000515529	LTBP3	Q9NS15	1303 aa		32.75	■■■□□ 2.83
DDR1-279	ENST00000515529	ZKSCAN2	Q63HK3	967 aa		32.74	■■■□□ 2.83
DDR1-279	ENST00000515529	ATF7IP	Q6VMQ6	1270 aa		32.74	■■■□□ 2.83
DDR1-279	ENST00000515529	CELF1	Q92879	486 aa	Known RBP	32.74	■■■□□ 2.83
DDR1-279	ENST00000515529	RPS8	P62241	208 aa	Known RBP	32.73	■■■□□ 2.83
DDR1-279	ENST00000515529	SP8	Q8IXZ3	490 aa		32.73	■■■□□ 2.83
DDR1-279	ENST00000515529	CDC5L	Q99459	802 aa	Known RBP	32.73	■■■□□ 2.83
DDR1-279	ENST00000515529	SEC31B	Q9NQW1	1179 aa		32.73	■■■□□ 2.83
DDR1-279	ENST00000515529	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.72	■■■□□ 2.83
DDR1-279	ENST00000515529	CHMP3	Q9Y3E7	222 aa		32.72	■■■□□ 2.83
DDR1-279	ENST00000515529	MYH3	P11055	1940 aa		32.71	■■■□□ 2.83
DDR1-279	ENST00000515529	ANKRD18A	Q8IVF6	992 aa		32.71	■■■□□ 2.83
DDR1-279	ENST00000515529	GREM2	Q9H772	168 aa		32.71	■■■□□ 2.83
DDR1-279	ENST00000515529	FER1L6	Q2WGJ9	1857 aa		32.71	■■■□□ 2.83
DDR1-279	ENST00000515529	TRIM27	P14373	513 aa		32.7	■■■□□ 2.83
DDR1-279	ENST00000515529	RTL9	Q8NET4	1388 aa		32.7	■■■□□ 2.82
DDR1-279	ENST00000515529	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.69	■■■□□ 2.82
DDR1-279	ENST00000515529	PSMD1	Q99460	953 aa		32.68	■■■□□ 2.82
DDR1-279	ENST00000515529	UTY	O14607	1347 aa		32.68	■■■□□ 2.82
DDR1-279	ENST00000515529	CSF1R	P07333	972 aa		32.67	■■■□□ 2.82
DDR1-279	ENST00000515529	FAM161A	Q3B820	660 aa		32.67	■■■□□ 2.82
DDR1-279	ENST00000515529	DPP8	Q6V1X1	898 aa	Predicted RBP	32.67	■■■□□ 2.82
DDR1-279	ENST00000515529	CLUAP1	Q96AJ1	413 aa		32.67	■■■□□ 2.82
DDR1-279	ENST00000515529	RCAN3	Q9UKA8	241 aa		32.67	■■■□□ 2.82
DDR1-279	ENST00000515529	TAF1	P21675	1872 aa		32.67	■■■□□ 2.82
DDR1-279	ENST00000515529	ITGA6	P23229	1130 aa		32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	FOXO4	P98177	505 aa		32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	LMBR1L	Q6UX01	489 aa		32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	FTSJ3	Q8IY81	847 aa	Known RBP	32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	MPND	Q8N594	471 aa		32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	SUCLG2	Q96I99	432 aa		32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	USP44	Q9H0E7	712 aa		32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	ZNF277	Q9NRM2	450 aa	Predicted RBP	32.66	■■■□□ 2.82
DDR1-279	ENST00000515529	ANKRD18B	A2A2Z9	1011 aa		32.65	■■■□□ 2.82
DDR1-279	ENST00000515529	IGHMBP2	P38935	993 aa	Known RBP	32.65	■■■□□ 2.82
DDR1-279	ENST00000515529	IFIT5	Q13325	482 aa	Known RBP	32.65	■■■□□ 2.82
DDR1-279	ENST00000515529	SUPT20H	Q8NEM7	779 aa		32.65	■■■□□ 2.82
DDR1-279	ENST00000515529	HDAC5	Q9UQL6	1122 aa		32.65	■■■□□ 2.82
DDR1-279	ENST00000515529	SBF1	O95248	1867 aa		32.64	■■■□□ 2.82
DDR1-279	ENST00000515529	INTS3	Q68E01	1043 aa	Known RBP	32.64	■■■□□ 2.82
DDR1-279	ENST00000515529	SLC51A	Q86UW1	340 aa		32.64	■■■□□ 2.82
DDR1-279	ENST00000515529	UBTFL1	P0CB47	393 aa	Predicted RBP	32.63	■■■□□ 2.81
DDR1-279	ENST00000515529	IARS	P41252	1262 aa	Known RBP	32.62	■■■□□ 2.81
DDR1-279	ENST00000515529	PRELP	P51888	382 aa		32.62	■■■□□ 2.81
DDR1-279	ENST00000515529	CCDC57	Q2TAC2	916 aa		32.62	■■■□□ 2.81
DDR1-279	ENST00000515529	EPHA10	Q5JZY3	1008 aa		32.62	■■■□□ 2.81
DDR1-279	ENST00000515529	NSFL1C	Q9UNZ2	370 aa	Known RBP	32.62	■■■□□ 2.81
DDR1-279	ENST00000515529	SNED1	Q8TER0	1413 aa		32.61	■■■□□ 2.81
DDR1-279	ENST00000515529	ZC3H4	Q9UPT8	1303 aa	Known RBP	32.61	■■■□□ 2.81
DDR1-279	ENST00000515529	TAF7L	Q5H9L4	462 aa		32.61	■■■□□ 2.81
DDR1-279	ENST00000515529	MPHOSPH8	Q99549	860 aa		32.61	■■■□□ 2.81
DDR1-279	ENST00000515529	TNN	Q9UQP3	1299 aa		32.61	■■■□□ 2.81
DDR1-279	ENST00000515529	BICC1	Q9H694	974 aa	Known RBP	32.6	■■■□□ 2.81
DDR1-279	ENST00000515529	BSDC1	Q9NW68	430 aa	Predicted RBP	32.6	■■■□□ 2.81
DDR1-279	ENST00000515529	ANKIB1	Q9P2G1	1089 aa		32.6	■■■□□ 2.81
DDR1-279	ENST00000515529	DZIP1L	Q8IYY4	767 aa	Known RBP	32.59	■■■□□ 2.81
DDR1-279	ENST00000515529	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.59	■■■□□ 2.81
DDR1-279	ENST00000515529	COL4A1	P02462	1669 aa		32.59	■■■□□ 2.81
DDR1-279	ENST00000515529	CCDC88A	Q3V6T2	1871 aa		32.59	■■■□□ 2.81
DDR1-279	ENST00000515529	JDP2	Q8WYK2	163 aa		32.58	■■■□□ 2.81
DDR1-279	ENST00000515529	LRRC37A	A6NMS7	1700 aa		32.57	■■■□□ 2.81
DDR1-279	ENST00000515529	GNAI3	P08754	354 aa		32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	MS4A1	P11836	297 aa		32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	GPSM2	P81274	684 aa		32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	LARGE2	Q8N3Y3	721 aa		32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	ZNF526	Q8TF50	670 aa	Predicted RBP	32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	KAZALD1	Q96I82	304 aa		32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	RTFDC1	Q9BY42	306 aa	Predicted RBP	32.57	■■■□□ 2.8
DDR1-279	ENST00000515529	PPIP5K2	O43314	1243 aa		32.56	■■■□□ 2.8
DDR1-279	ENST00000515529	TMEM57	Q8N5G2	664 aa		32.56	■■■□□ 2.8
DDR1-279	ENST00000515529	VPS33B	Q9H267	617 aa		32.56	■■■□□ 2.8
DDR1-279	ENST00000515529	C6orf229	H3BNL8	230 aa		32.55	■■■□□ 2.8
DDR1-279	ENST00000515529	MEIS3	Q99687	375 aa		32.55	■■■□□ 2.8
DDR1-279	ENST00000515529	RABL6	Q3YEC7	729 aa	Predicted RBP	32.54	■■■□□ 2.8
DDR1-279	ENST00000515529	TIAM2	Q8IVF5	1701 aa		32.54	■■■□□ 2.8
DDR1-279	ENST00000515529	ITPRIP	Q8IWB1	547 aa		32.53	■■■□□ 2.8
DDR1-279	ENST00000515529	ANKRD44	Q8N8A2	993 aa		32.53	■■■□□ 2.8
DDR1-279	ENST00000515529	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.53	■■■□□ 2.8

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