RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TAF1P21675 1872 aa16.31■□□□□ 0.2
CLCN3-210ENST00000515420 PDE8AO60658 829 aa16.3■□□□□ 0.2
CLCN3-210ENST00000515420 CT47B1P0C2W7 299 aaPredicted RBP16.3■□□□□ 0.2
CLCN3-210ENST00000515420 OLFM4Q6UX06 510 aa16.3■□□□□ 0.2
CLCN3-210ENST00000515420 SP8Q8IXZ3 490 aa16.3■□□□□ 0.2
CLCN3-210ENST00000515420 LINS1Q8NG48 757 aa16.3■□□□□ 0.2
CLCN3-210ENST00000515420 VPS33BQ9H267 617 aa16.3■□□□□ 0.2
CLCN3-210ENST00000515420 WDR90Q96KV7 1748 aa16.3■□□□□ 0.2
CLCN3-210ENST00000515420 KIF3CO14782 793 aa16.29■□□□□ 0.2
CLCN3-210ENST00000515420 C1QTNF8P60827 252 aa16.29■□□□□ 0.2
CLCN3-210ENST00000515420 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
CLCN3-210ENST00000515420 DPY19L2Q6NUT2 758 aa16.29■□□□□ 0.2
CLCN3-210ENST00000515420 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
CLCN3-210ENST00000515420 GCKRQ14397 625 aa16.28■□□□□ 0.2
CLCN3-210ENST00000515420 CWF19L2Q2TBE0 894 aaKnown RBP16.28■□□□□ 0.2
CLCN3-210ENST00000515420 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
CLCN3-210ENST00000515420 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
CLCN3-210ENST00000515420 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
CLCN3-210ENST00000515420 H7C1W4 665 aa16.27■□□□□ 0.2
CLCN3-210ENST00000515420 ALDH1L2Q3SY69 923 aa16.27■□□□□ 0.2
CLCN3-210ENST00000515420 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.2
CLCN3-210ENST00000515420 CDCA7LQ96GN5 454 aa16.27■□□□□ 0.2
CLCN3-210ENST00000515420 NMRK2Q9NPI5 230 aa16.27■□□□□ 0.2
CLCN3-210ENST00000515420 PTPRCP08575 1304 aa16.26■□□□□ 0.19
CLCN3-210ENST00000515420 PLA2G12BQ9BX93 195 aa16.26■□□□□ 0.19
CLCN3-210ENST00000515420 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
CLCN3-210ENST00000515420 TOMM70O94826 608 aa16.25■□□□□ 0.19
CLCN3-210ENST00000515420 CTSWP56202 376 aa16.25■□□□□ 0.19
CLCN3-210ENST00000515420 RPS8P62241 208 aaKnown RBP16.25■□□□□ 0.19
CLCN3-210ENST00000515420 BEND3Q5T5X7 828 aa16.25■□□□□ 0.19
CLCN3-210ENST00000515420 MRPL50Q8N5N7 158 aaKnown RBP16.25■□□□□ 0.19
CLCN3-210ENST00000515420 JDP2Q8WYK2 163 aa16.25■□□□□ 0.19
CLCN3-210ENST00000515420 CELF1Q92879 486 aaKnown RBP16.25■□□□□ 0.19
CLCN3-210ENST00000515420 LTBP1Q14766 1721 aa16.25■□□□□ 0.19
CLCN3-210ENST00000515420 SCN4AP35499 1836 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 FZD9O00144 591 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 ALDH1L1O75891 902 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 CASP7P55210 303 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 DPP8Q6V1X1 898 aaPredicted RBP16.24■□□□□ 0.19
CLCN3-210ENST00000515420 UBE3BQ7Z3V4 1068 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 MPNDQ8N594 471 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 DUOX1Q9NRD9 1551 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 COL4A1P02462 1669 aa16.24■□□□□ 0.19
CLCN3-210ENST00000515420 F6X3S4 739 aa16.23■□□□□ 0.19
CLCN3-210ENST00000515420 VEGFAP15692 232 aaPredicted RBP16.23■□□□□ 0.19
CLCN3-210ENST00000515420 TTLL11Q8NHH1 800 aa16.23■□□□□ 0.19
CLCN3-210ENST00000515420 SSH1Q8WYL5 1049 aa16.23■□□□□ 0.19
CLCN3-210ENST00000515420 L3MBTL3Q96JM7 780 aaPredicted RBP16.23■□□□□ 0.19
CLCN3-210ENST00000515420 CDC5LQ99459 802 aaKnown RBP16.23■□□□□ 0.19
CLCN3-210ENST00000515420 RRAGCQ9HB90 399 aa16.23■□□□□ 0.19
CLCN3-210ENST00000515420 COL4A5P29400 1685 aa16.22■□□□□ 0.19
CLCN3-210ENST00000515420 BRPF1P55201 1214 aaPredicted RBP16.22■□□□□ 0.19
CLCN3-210ENST00000515420 C16orf71Q8IYS4 520 aaPredicted RBP16.22■□□□□ 0.19
CLCN3-210ENST00000515420 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
CLCN3-210ENST00000515420 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
CLCN3-210ENST00000515420 JARID2Q92833 1246 aaPredicted RBP16.22■□□□□ 0.19
CLCN3-210ENST00000515420 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
CLCN3-210ENST00000515420 PPIP5K2O43314 1243 aa16.21■□□□□ 0.19
CLCN3-210ENST00000515420 KIAA2012Q0VF49 1180 aa16.21■□□□□ 0.19
CLCN3-210ENST00000515420 SLC51AQ86UW1 340 aa16.21■□□□□ 0.19
CLCN3-210ENST00000515420 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
CLCN3-210ENST00000515420 SRCIN1Q9C0H9 1055 aa16.21■□□□□ 0.19
CLCN3-210ENST00000515420 PODXL2Q9NZ53 605 aa16.21■□□□□ 0.19
CLCN3-210ENST00000515420 IQCA1LA6NCM1 817 aa16.2■□□□□ 0.18
CLCN3-210ENST00000515420 GRM8O00222 908 aa16.2■□□□□ 0.18
CLCN3-210ENST00000515420 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
CLCN3-210ENST00000515420 NIM1KQ8IY84 436 aa16.2■□□□□ 0.18
CLCN3-210ENST00000515420 GPC2Q8N158 579 aa16.2■□□□□ 0.18
CLCN3-210ENST00000515420 SMC4Q9NTJ3 1288 aa16.2■□□□□ 0.18
CLCN3-210ENST00000515420 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
CLCN3-210ENST00000515420 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
CLCN3-210ENST00000515420 POTECB2RU33 542 aa16.19■□□□□ 0.18
CLCN3-210ENST00000515420 CSF1RP07333 972 aa16.19■□□□□ 0.18
CLCN3-210ENST00000515420 EIF6P56537 245 aaKnown RBP16.19■□□□□ 0.18
CLCN3-210ENST00000515420 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLCN3-210ENST00000515420 AOC3Q16853 763 aa16.19■□□□□ 0.18
CLCN3-210ENST00000515420 GREM2Q9H772 168 aa16.19■□□□□ 0.18
CLCN3-210ENST00000515420 FSTL1Q12841 308 aa16.18■□□□□ 0.18
CLCN3-210ENST00000515420 SLC4A10Q6U841 1118 aa16.18■□□□□ 0.18
CLCN3-210ENST00000515420 BSDC1Q9NW68 430 aaPredicted RBP16.18■□□□□ 0.18
CLCN3-210ENST00000515420 NSFL1CQ9UNZ2 370 aaKnown RBP16.18■□□□□ 0.18
CLCN3-210ENST00000515420 UTYO14607 1347 aa16.18■□□□□ 0.18
CLCN3-210ENST00000515420 GPSM2P81274 684 aa16.17■□□□□ 0.18
CLCN3-210ENST00000515420 CCDC85AQ96PX6 553 aaPredicted RBP16.17■□□□□ 0.18
CLCN3-210ENST00000515420 EYA3Q99504 573 aa16.17■□□□□ 0.18
CLCN3-210ENST00000515420 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
CLCN3-210ENST00000515420 ZNRF3Q9ULT6 936 aa16.17■□□□□ 0.18
CLCN3-210ENST00000515420 XDHP47989 1333 aa16.17■□□□□ 0.18
CLCN3-210ENST00000515420 ZBED9Q6R2W3 1325 aa16.17■□□□□ 0.18
CLCN3-210ENST00000515420 ITGA6P23229 1130 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 RARSP54136 660 aaKnown RBP16.16■□□□□ 0.18
CLCN3-210ENST00000515420 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 TBC1D16Q8TBP0 767 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 POLLQ9UGP5 575 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 KIF16BQ96L93 1317 aa16.16■□□□□ 0.18
CLCN3-210ENST00000515420 IGHMBP2P38935 993 aaKnown RBP16.15■□□□□ 0.18
CLCN3-210ENST00000515420 FOXO4P98177 505 aa16.15■□□□□ 0.18
CLCN3-210ENST00000515420 FAM161AQ3B820 660 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms