RNA–Protein interactions for RNA: ENST00000515257.6

CDH18-212, Transcript of cadherin 18, humanhuman

TSL 5

Gene CDH18, Length 1,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH18-212ENST00000515257 TMC4Q7Z404 712 aa12.2□□□□□ -0.46
CDH18-212ENST00000515257 TMX4Q9H1E5 349 aaPredicted RBP12.2□□□□□ -0.46
CDH18-212ENST00000515257 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
CDH18-212ENST00000515257 CDHR2Q9BYE9 1310 aa12.19□□□□□ -0.46
CDH18-212ENST00000515257 GLTPD2A6NH11 291 aa12.19□□□□□ -0.46
CDH18-212ENST00000515257 SP8Q8IXZ3 490 aa12.19□□□□□ -0.46
CDH18-212ENST00000515257 LINS1Q8NG48 757 aa12.19□□□□□ -0.46
CDH18-212ENST00000515257 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
CDH18-212ENST00000515257 ZNF277Q9NRM2 450 aaPredicted RBP12.19□□□□□ -0.46
CDH18-212ENST00000515257 KIF3CO14782 793 aa12.18□□□□□ -0.46
CDH18-212ENST00000515257 PDE8AO60658 829 aa12.18□□□□□ -0.46
CDH18-212ENST00000515257 CT47B1P0C2W7 299 aaPredicted RBP12.18□□□□□ -0.46
CDH18-212ENST00000515257 C1QTNF8P60827 252 aa12.18□□□□□ -0.46
CDH18-212ENST00000515257 GCKRQ14397 625 aa12.18□□□□□ -0.46
CDH18-212ENST00000515257 CWF19L2Q2TBE0 894 aaKnown RBP12.18□□□□□ -0.46
CDH18-212ENST00000515257 TIAM2Q8IVF5 1701 aa12.17□□□□□ -0.46
CDH18-212ENST00000515257 H7C1W4 665 aa12.17□□□□□ -0.46
CDH18-212ENST00000515257 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
CDH18-212ENST00000515257 CCDC152Q4G0S7 254 aa12.17□□□□□ -0.46
CDH18-212ENST00000515257 DPY19L2Q6NUT2 758 aa12.17□□□□□ -0.46
CDH18-212ENST00000515257 RTFDC1Q9BY42 306 aaPredicted RBP12.17□□□□□ -0.46
CDH18-212ENST00000515257 VPS33BQ9H267 617 aa12.17□□□□□ -0.46
CDH18-212ENST00000515257 NMRK2Q9NPI5 230 aa12.17□□□□□ -0.46
CDH18-212ENST00000515257 ALDH1L2Q3SY69 923 aa12.16□□□□□ -0.46
CDH18-212ENST00000515257 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
CDH18-212ENST00000515257 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
CDH18-212ENST00000515257 FOXD4L1Q9NU39 408 aa12.16□□□□□ -0.46
CDH18-212ENST00000515257 F6X3S4 739 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 CTSWP56202 376 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 RPS8P62241 208 aaKnown RBP12.15□□□□□ -0.46
CDH18-212ENST00000515257 UBE3BQ7Z3V4 1068 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 SLC51AQ86UW1 340 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 SUPT20HQ8NEM7 779 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 SSH1Q8WYL5 1049 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 JARID2Q92833 1246 aaPredicted RBP12.15□□□□□ -0.46
CDH18-212ENST00000515257 CELF1Q92879 486 aaKnown RBP12.15□□□□□ -0.46
CDH18-212ENST00000515257 PLA2G12BQ9BX93 195 aa12.15□□□□□ -0.46
CDH18-212ENST00000515257 FZD9O00144 591 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 CASP7P55210 303 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 DPP8Q6V1X1 898 aaPredicted RBP12.14□□□□□ -0.47
CDH18-212ENST00000515257 MPNDQ8N594 471 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 JDP2Q8WYK2 163 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 PTPRCP08575 1304 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 TAF1P21675 1872 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 RTL9Q8NET4 1388 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 ALDH1L1O75891 902 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 TOMM70O94826 608 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
CDH18-212ENST00000515257 TTLL11Q8NHH1 800 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 SEC31BQ9NQW1 1179 aa12.14□□□□□ -0.47
CDH18-212ENST00000515257 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
CDH18-212ENST00000515257 LRRC37AA6NMS7 1700 aa12.13□□□□□ -0.47
CDH18-212ENST00000515257 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
CDH18-212ENST00000515257 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
CDH18-212ENST00000515257 L3MBTL3Q96JM7 780 aaPredicted RBP12.13□□□□□ -0.47
CDH18-212ENST00000515257 MYH3P11055 1940 aa12.13□□□□□ -0.47
CDH18-212ENST00000515257 WDR90Q96KV7 1748 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 PPIP5K2O43314 1243 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 DDNO94850 711 aaPredicted RBP12.12□□□□□ -0.47
CDH18-212ENST00000515257 CSF1RP07333 972 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 HNRNPUQ00839 825 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDH18-212ENST00000515257 ANKRD18AQ8IVF6 992 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 C16orf71Q8IYS4 520 aaPredicted RBP12.12□□□□□ -0.47
CDH18-212ENST00000515257 RBM46Q8TBY0 533 aaKnown RBP12.12□□□□□ -0.47
CDH18-212ENST00000515257 CDC5LQ99459 802 aaKnown RBP12.12□□□□□ -0.47
CDH18-212ENST00000515257 SRCIN1Q9C0H9 1055 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 PCNTO95613 3336 aa12.12□□□□□ -0.47
CDH18-212ENST00000515257 COL4A1P02462 1669 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 COL4A5P29400 1685 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 POTECB2RU33 542 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 GRM8O00222 908 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 AOC3Q16853 763 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 SLC4A10Q6U841 1118 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 GPC2Q8N158 579 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
CDH18-212ENST00000515257 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 GREM2Q9H772 168 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 PODXL2Q9NZ53 605 aa12.11□□□□□ -0.47
CDH18-212ENST00000515257 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
CDH18-212ENST00000515257 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
CDH18-212ENST00000515257 EIF6P56537 245 aaKnown RBP12.1□□□□□ -0.47
CDH18-212ENST00000515257 GPSM2P81274 684 aa12.1□□□□□ -0.47
CDH18-212ENST00000515257 BSDC1Q9NW68 430 aaPredicted RBP12.1□□□□□ -0.47
CDH18-212ENST00000515257 C9orf78Q9NZ63 289 aaPredicted RBP12.1□□□□□ -0.47
CDH18-212ENST00000515257 DUOX1Q9NRD9 1551 aa12.1□□□□□ -0.47
CDH18-212ENST00000515257 UTYO14607 1347 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 IQCA1LA6NCM1 817 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 FSTL1Q12841 308 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 POLLQ9UGP5 575 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 ZNRF3Q9ULT6 936 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 LTBP1Q14766 1721 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 ZBED9Q6R2W3 1325 aa12.09□□□□□ -0.47
CDH18-212ENST00000515257 ITGA6P23229 1130 aa12.08□□□□□ -0.47
CDH18-212ENST00000515257 FOXO4P98177 505 aa12.08□□□□□ -0.47
CDH18-212ENST00000515257 WASHC4Q2M389 1173 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms