RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 RALYLQ86SE5 291 aaKnown RBP16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 NR1I2O75469 434 aa16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 TEX35Q5T0J7 233 aa16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 AOPEPQ8N6M6 819 aa16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 MYD88Q99836 296 aa16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 CHRNA2Q15822 529 aa16.25■□□□□ 0.19
TSPAN17-208ENST00000514705 A0A087WWV3 80 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 TMEM94Q12767 1356 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 KCNQ3O43525 872 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 ATP2B1P20020 1258 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 LMTK3Q96Q04 1460 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 DMTNQ08495 405 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 UBXN4Q92575 508 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 TMX1Q9H3N1 280 aa16.24■□□□□ 0.19
TSPAN17-208ENST00000514705 COL3A1P02461 1466 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 SNW1Q13573 536 aaKnown RBP16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 PI4K2BQ8TCG2 481 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 VWDEQ8N2E2 1590 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 POLR3GO15318 223 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 FKBP4Q02790 459 aaKnown RBP eCLIP16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 CCDC129Q6ZRS4 1044 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 OGFRQ9NZT2 677 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 PIP4K2AP48426 406 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 KRT222Q8N1A0 295 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 CLSTN2Q9H4D0 955 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 ZSWIM6Q9HCJ5 1215 aa16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
TSPAN17-208ENST00000514705 GRM8O00222 908 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 URI1O94763 535 aaPredicted RBP16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 NAA30Q147X3 362 aaPredicted RBP16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 CHMP4CQ96CF2 233 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 CPSF1Q10570 1443 aaKnown RBP16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 ADGRB2O60241 1585 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 CTAGE5O15320 804 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 CFAP100Q494V2 611 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 FEZ1Q99689 392 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 GCP02774 474 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 RPS6KB1P23443 525 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 TRDNQ13061 729 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 LRRC59Q96AG4 307 aaKnown RBP16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 SLAIN2Q9P270 581 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 ALKQ9UM73 1620 aa16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 CPLX2Q6PUV4 134 aaKnown RBP16.22■□□□□ 0.19
TSPAN17-208ENST00000514705 NEMFO60524 1076 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 TMEM87AQ8NBN3 555 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 BICC1Q9H694 974 aaKnown RBP16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 MROH2AA6NES4 1674 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 ATP7BP35670 1465 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 HOXC9P31274 260 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 OLFM4Q6UX06 510 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 ANKRD24Q8TF21 1146 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 ZBTB9Q96C00 473 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 DEPDC5O75140 1603 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 A0A0D9SFI3 127 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 ATP5J2-PTCD1G3V325 749 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 GOLIM4O00461 696 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 PTCD1O75127 700 aaKnown RBP16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 TRIM29Q14134 588 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 KSR2Q6VAB6 950 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 ZSCAN16Q9H4T2 348 aaPredicted RBP16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 HMG20BQ9P0W2 317 aa16.21■□□□□ 0.19
TSPAN17-208ENST00000514705 TTLL5Q6EMB2 1281 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 TTC14Q96N46 770 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 CCDC85AQ96PX6 553 aaPredicted RBP16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 HAND2P61296 217 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 APOBRQ0VD83 1088 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 UBE3BQ7Z3V4 1068 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 CACTINQ8WUQ7 758 aaKnown RBP16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 TM6SF1Q9BZW5 370 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 HSP90AA4PQ58FG1 418 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 EAF2Q96CJ1 260 aaPredicted RBP16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 KCNF1Q9H3M0 494 aa16.2■□□□□ 0.18
TSPAN17-208ENST00000514705 KIF20AO95235 890 aa16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 CAVIN2O95810 425 aa16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 SLC39A6Q13433 755 aa16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 ELF2Q15723 593 aa16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 RPAP1Q9BWH6 1393 aaPredicted RBP16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 DDX17Q92841 729 aaKnown RBP16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 ZNF215Q9UL58 517 aaPredicted RBP16.19■□□□□ 0.18
TSPAN17-208ENST00000514705 TMCO3Q6UWJ1 677 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 SYT10Q6XYQ8 523 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 C8orf76Q96K31 380 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 NCOA5Q9HCD5 579 aaKnown RBP16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 A0A1B0GVL5 298 aa16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 SLU7O95391 586 aaKnown RBP16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 SLC3A2P08195 630 aaKnown RBP16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
TSPAN17-208ENST00000514705 BEND3Q5T5X7 828 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms