RNA–Protein interactions for RNA: ENST00000514621.5

HIPK1-210, Transcript of homeodomain interacting protein kinase 1, human

TSL 4

Gene HIPK1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIPK1-210	ENST00000514621	LBR	Q14739	615 aa	Known RBP	9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	LARP1	Q6PKG0	1096 aa	Known RBP	9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	SIX5	Q8N196	739 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	C1orf216	Q8TAB5	229 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	ZNF594	Q96JF6	807 aa	Predicted RBP	9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	TRERF1	Q96PN7	1200 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	RUBCNL	Q9H714	662 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	CABP1	Q9NZU7	370 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	USP3	Q9Y6I4	520 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	RPRD2	Q5VT52	1461 aa	Known RBP	9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	NOS1	P29475	1434 aa		9.64	□□□□□ -0.87
HIPK1-210	ENST00000514621	ACIN1	Q9UKV3	1341 aa	Known RBP	9.63	□□□□□ -0.87
HIPK1-210	ENST00000514621		M0R2N6	131 aa		9.63	□□□□□ -0.87
HIPK1-210	ENST00000514621	UBAP2L	Q14157	1087 aa	Known RBP	9.63	□□□□□ -0.87
HIPK1-210	ENST00000514621	NBPF1	Q3BBV0	1214 aa		9.63	□□□□□ -0.87
HIPK1-210	ENST00000514621	AIDA	Q96BJ3	306 aa		9.63	□□□□□ -0.87
HIPK1-210	ENST00000514621	VRTN	Q9H8Y1	702 aa		9.63	□□□□□ -0.87
HIPK1-210	ENST00000514621	EFHC2	Q5JST6	749 aa		9.62	□□□□□ -0.87
HIPK1-210	ENST00000514621	TNS4	Q8IZW8	715 aa		9.62	□□□□□ -0.87
HIPK1-210	ENST00000514621	MPHOSPH9	Q99550	1183 aa		9.62	□□□□□ -0.87
HIPK1-210	ENST00000514621	MYO3A	Q8NEV4	1616 aa		9.62	□□□□□ -0.87
HIPK1-210	ENST00000514621		E9PCH4	1651 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	A2ML1	A8K2U0	1454 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	NLRP1	Q9C000	1473 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	CFAP65	Q6ZU64	1925 aa	Known RBP	9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	ARHGEF15	O94989	841 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	ATP4A	P20648	1035 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	EPHA4	P54764	986 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	FOXK2	Q01167	660 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	IDI1	Q13907	227 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	CFAP70	Q5T0N1	1121 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	LYPD4	Q6UWN0	246 aa		9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	9.61	□□□□□ -0.87
HIPK1-210	ENST00000514621	SYNM	O15061	1565 aa		9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	TAT	P17735	454 aa	Predicted RBP	9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	SEC13	P55735	322 aa		9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	SLC9A9	Q8IVB4	645 aa		9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	CRISPLD1	Q9H336	500 aa		9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	SLC52A1	Q9NWF4	448 aa		9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	ADAMTS8	Q9UP79	889 aa		9.6	□□□□□ -0.87
HIPK1-210	ENST00000514621	PTPRT	O14522	1441 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	ZNF142	P52746	1687 aa	Predicted RBP	9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	FAM196B	A6NMK8	535 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	SFI1	A8K8P3	1242 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	DKK1	O94907	266 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	MX2	P20592	715 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	TEAD4	Q15561	434 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	THEMIS	Q8N1K5	641 aa	Predicted RBP	9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	CFHR5	Q9BXR6	569 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	ZDHHC3	Q9NYG2	299 aa		9.59	□□□□□ -0.87
HIPK1-210	ENST00000514621	CELA2B	P08218	269 aa	Predicted RBP	9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	PTK7	Q13308	1070 aa		9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	CRTC2	Q53ET0	693 aa	Predicted RBP	9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	PHF24	Q9UPV7	400 aa		9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	CHMP3	Q9Y3E7	222 aa		9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	PLA2R1	Q13018	1463 aa		9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	UGGT1	Q9NYU2	1555 aa		9.58	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L15	C9J2P7	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L10	C9JJH3	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L13	C9JLJ4	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L12	C9JPN9	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L11	C9JVI0	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L21	D6R901	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L18	D6R9N7	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L22	D6RA61	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L17	D6RBQ6	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L19	D6RCP7	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L20	D6RJB6	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	NOS2	P35228	1153 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	USP17L24	Q0WX57	530 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	ARSJ	Q5FYB0	599 aa	Predicted RBP	9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	TSEN2	Q8NCE0	465 aa	Known RBP	9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	L3MBTL2	Q969R5	705 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	PARP3	Q9Y6F1	533 aa		9.57	□□□□□ -0.88
HIPK1-210	ENST00000514621	PIK3C2B	O00750	1634 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	SERTM1	A2A2V5	107 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	PSMA6	P60900	246 aa	Known RBP	9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	MAP3K10	Q02779	954 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	TBCEL	Q5QJ74	424 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	FIGNL1	Q6PIW4	674 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	NLRP8	Q86W28	1048 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	ANKMY2	Q8IV38	441 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	ACD	Q96AP0	544 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	NDFIP2	Q9NV92	336 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	ZNF232	Q9UNY5	417 aa		9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	NSFL1C	Q9UNZ2	370 aa	Known RBP	9.56	□□□□□ -0.88
HIPK1-210	ENST00000514621	RFX1	P22670	979 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	GSK3A	P49840	483 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	DPYD	Q12882	1025 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	ZDHHC1	Q8WTX9	485 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	ABHD17A	Q96GS6	310 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	UBR1	Q8IWV7	1749 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	TRPM2	O94759	1503 aa		9.55	□□□□□ -0.88
HIPK1-210	ENST00000514621	SPHKAP	Q2M3C7	1700 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	TMEM2	Q9UHN6	1383 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621		A0A1W2PNR3	127 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	KCNMA1	Q12791	1236 aa		9.54	□□□□□ -0.88
HIPK1-210	ENST00000514621	BICDL1	Q6ZP65	573 aa		9.54	□□□□□ -0.88

Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms