RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 NYXQ9GZU5 481 aa24.37■■□□□ 1.49
SSBP2-218ENST00000514493 R3HDM1Q15032 1099 aaKnown RBP24.36■■□□□ 1.49
SSBP2-218ENST00000514493 NUTM1Q86Y26 1132 aa24.36■■□□□ 1.49
SSBP2-218ENST00000514493 KIF1BPQ96EK5 621 aa24.36■■□□□ 1.49
SSBP2-218ENST00000514493 OS9Q13438 667 aaPredicted RBP24.35■■□□□ 1.49
SSBP2-218ENST00000514493 KLHDC4Q8TBB5 520 aa24.35■■□□□ 1.49
SSBP2-218ENST00000514493 RHPN1Q8TCX5 695 aa24.35■■□□□ 1.49
SSBP2-218ENST00000514493 PDGFDQ9GZP0 370 aaPredicted RBP24.35■■□□□ 1.49
SSBP2-218ENST00000514493 ABCC12Q96J65 1359 aa24.34■■□□□ 1.49
SSBP2-218ENST00000514493 PNPLA7Q6ZV29 1317 aa24.34■■□□□ 1.49
SSBP2-218ENST00000514493 SPEF2Q9C093 1822 aa24.34■■□□□ 1.49
SSBP2-218ENST00000514493 NFIXQ14938 502 aa24.34■■□□□ 1.49
SSBP2-218ENST00000514493 SLC15A2Q16348 729 aa24.34■■□□□ 1.49
SSBP2-218ENST00000514493 TTLL11Q8NHH1 800 aa24.34■■□□□ 1.49
SSBP2-218ENST00000514493 TNRC6CQ9HCJ0 1690 aaKnown RBP24.34■■□□□ 1.49
SSBP2-218ENST00000514493 HCLS1P14317 486 aaPredicted RBP24.34■■□□□ 1.49
SSBP2-218ENST00000514493 G3BP1Q13283 466 aaKnown RBP eCLIP24.34■■□□□ 1.49
SSBP2-218ENST00000514493 COL23A1Q86Y22 540 aaPredicted RBP24.34■■□□□ 1.49
SSBP2-218ENST00000514493 CCDC57Q2TAC2 916 aa24.33■■□□□ 1.49
SSBP2-218ENST00000514493 C8orf34Q49A92 452 aa24.33■■□□□ 1.49
SSBP2-218ENST00000514493 NBPF5PQ86XG9 351 aaPredicted RBP24.33■■□□□ 1.49
SSBP2-218ENST00000514493 SIL1Q9H173 461 aa24.33■■□□□ 1.49
SSBP2-218ENST00000514493 ERFEQ4G0M1 354 aa24.32■■□□□ 1.48
SSBP2-218ENST00000514493 NRXN2Q9P2S2 1712 aa24.32■■□□□ 1.48
SSBP2-218ENST00000514493 GREM2Q9H772 168 aa24.31■■□□□ 1.48
SSBP2-218ENST00000514493 STK32BQ9NY57 414 aa24.31■■□□□ 1.48
SSBP2-218ENST00000514493 RTL9Q8NET4 1388 aa24.31■■□□□ 1.48
SSBP2-218ENST00000514493 IFIT5Q13325 482 aaKnown RBP24.31■■□□□ 1.48
SSBP2-218ENST00000514493 CCDC85AQ96PX6 553 aaPredicted RBP24.31■■□□□ 1.48
SSBP2-218ENST00000514493 RIC1Q4ADV7 1423 aa24.3■■□□□ 1.48
SSBP2-218ENST00000514493 TPTE2Q6XPS3 522 aa24.3■■□□□ 1.48
SSBP2-218ENST00000514493 PLEKHM2Q8IWE5 1019 aa24.3■■□□□ 1.48
SSBP2-218ENST00000514493 IL1RAPL2Q9NP60 686 aa24.3■■□□□ 1.48
SSBP2-218ENST00000514493 ITGA6P23229 1130 aa24.29■■□□□ 1.48
SSBP2-218ENST00000514493 GTF2E1P29083 439 aaPredicted RBP24.29■■□□□ 1.48
SSBP2-218ENST00000514493 SLC10A5Q5PT55 438 aa24.29■■□□□ 1.48
SSBP2-218ENST00000514493 C16orf71Q8IYS4 520 aaPredicted RBP24.29■■□□□ 1.48
SSBP2-218ENST00000514493 OTUD7AQ8TE49 926 aaPredicted RBP24.29■■□□□ 1.48
SSBP2-218ENST00000514493 SALL3Q9BXA9 1300 aa24.29■■□□□ 1.48
SSBP2-218ENST00000514493 SASH1O94885 1247 aa24.29■■□□□ 1.48
SSBP2-218ENST00000514493 FBXO3Q9UK99 471 aa24.29■■□□□ 1.48
SSBP2-218ENST00000514493 ANKRD18BA2A2Z9 1011 aa24.28■■□□□ 1.48
SSBP2-218ENST00000514493 CIAO1O76071 339 aa24.28■■□□□ 1.48
SSBP2-218ENST00000514493 TM4SF1P30408 202 aa24.28■■□□□ 1.48
SSBP2-218ENST00000514493 CCDC152Q4G0S7 254 aa24.28■■□□□ 1.48
SSBP2-218ENST00000514493 BCL11AQ9H165 835 aa24.28■■□□□ 1.48
SSBP2-218ENST00000514493 EYA2O00167 538 aa24.27■■□□□ 1.48
SSBP2-218ENST00000514493 MSH5O43196 834 aa24.27■■□□□ 1.48
SSBP2-218ENST00000514493 ZNF594Q96JF6 807 aaPredicted RBP24.27■■□□□ 1.48
SSBP2-218ENST00000514493 TAF1P21675 1872 aa24.27■■□□□ 1.48
SSBP2-218ENST00000514493 TAF7LQ5H9L4 462 aa24.26■■□□□ 1.47
SSBP2-218ENST00000514493 ATG9AQ7Z3C6 839 aa24.26■■□□□ 1.47
SSBP2-218ENST00000514493 CLASRPQ8N2M8 674 aaKnown RBP24.26■■□□□ 1.47
SSBP2-218ENST00000514493 CNBD1Q8NA66 436 aa24.26■■□□□ 1.47
SSBP2-218ENST00000514493 IL15P40933 162 aaPredicted RBP24.26■■□□□ 1.47
SSBP2-218ENST00000514493 NLGN1Q8N2Q7 840 aa24.26■■□□□ 1.47
SSBP2-218ENST00000514493 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
SSBP2-218ENST00000514493 DDR1Q08345 913 aa24.25■■□□□ 1.47
SSBP2-218ENST00000514493 SF3B3Q15393 1217 aaKnown RBP24.25■■□□□ 1.47
SSBP2-218ENST00000514493 POLRMTO00411 1230 aaKnown RBP24.24■■□□□ 1.47
SSBP2-218ENST00000514493 OSBPL3Q9H4L5 887 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 ANKRD31Q8N7Z5 1873 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 COL4A1P02462 1669 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 NPHP1O15259 732 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 MX1P20591 662 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 LRRC24Q50LG9 513 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 BMP2KLQ5H9B9 411 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 PRR5LQ6MZQ0 368 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 C3orf67Q6ZVT6 689 aa24.24■■□□□ 1.47
SSBP2-218ENST00000514493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.24■■□□□ 1.47
SSBP2-218ENST00000514493 AK9Q5TCS8 1911 aa24.23■■□□□ 1.47
SSBP2-218ENST00000514493 SERPINB2P05120 415 aa24.23■■□□□ 1.47
SSBP2-218ENST00000514493 PDE1AP54750 535 aa24.23■■□□□ 1.47
SSBP2-218ENST00000514493 PUS3Q9BZE2 481 aaKnown RBP24.23■■□□□ 1.47
SSBP2-218ENST00000514493 AOX1Q06278 1338 aa24.23■■□□□ 1.47
SSBP2-218ENST00000514493 TFCP2Q12800 502 aa24.22■■□□□ 1.47
SSBP2-218ENST00000514493 SRCAPQ6ZRS2 3230 aa24.22■■□□□ 1.47
SSBP2-218ENST00000514493 ZNF609O15014 1411 aa24.22■■□□□ 1.47
SSBP2-218ENST00000514493 NLRP3Q96P20 1036 aa24.21■■□□□ 1.47
SSBP2-218ENST00000514493 STAP2Q9UGK3 403 aa24.21■■□□□ 1.47
SSBP2-218ENST00000514493 ST5P78524 1137 aa24.21■■□□□ 1.47
SSBP2-218ENST00000514493 TTC22Q5TAA0 569 aa24.21■■□□□ 1.47
SSBP2-218ENST00000514493 AACSQ86V21 672 aa24.21■■□□□ 1.47
SSBP2-218ENST00000514493 CCDC24Q8N4L8 307 aa24.2■■□□□ 1.46
SSBP2-218ENST00000514493 SEC31BQ9NQW1 1179 aa24.2■■□□□ 1.46
SSBP2-218ENST00000514493 ARAP2Q8WZ64 1704 aa24.2■■□□□ 1.46
SSBP2-218ENST00000514493 TNNI3KQ59H18 835 aa24.19■■□□□ 1.46
SSBP2-218ENST00000514493 LDHAL6AQ6ZMR3 332 aa24.19■■□□□ 1.46
SSBP2-218ENST00000514493 EAF2Q96CJ1 260 aaPredicted RBP24.19■■□□□ 1.46
SSBP2-218ENST00000514493 GPR108Q9NPR9 543 aa24.19■■□□□ 1.46
SSBP2-218ENST00000514493 FPGT-TNNI3KV9GXZ4 949 aa24.19■■□□□ 1.46
SSBP2-218ENST00000514493 IFIT2P09913 472 aaKnown RBP24.19■■□□□ 1.46
SSBP2-218ENST00000514493 GSPT1P15170 499 aaKnown RBP24.19■■□□□ 1.46
SSBP2-218ENST00000514493 CDC5LQ99459 802 aaKnown RBP24.19■■□□□ 1.46
SSBP2-218ENST00000514493 RIPOR2Q9Y4F9 1068 aa24.19■■□□□ 1.46
SSBP2-218ENST00000514493 CNNM1Q9NRU3 951 aa24.18■■□□□ 1.46
SSBP2-218ENST00000514493 TTC41PQ6P2S7 1318 aa24.17■■□□□ 1.46
SSBP2-218ENST00000514493 TSHZ3Q63HK5 1081 aa24.17■■□□□ 1.46
SSBP2-218ENST00000514493 ZBTB7AO95365 584 aa24.16■■□□□ 1.46
SSBP2-218ENST00000514493 MMP10P09238 476 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms