RNA–Protein interactions for RNA: ENST00000514308.3

PDLIM3-210, Transcript of PDZ and LIM domain 3, humanhuman

TSL 2

Gene PDLIM3, Length 906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-210ENST00000514308 SMC1BQ8NDV3 1235 aa16.91■□□□□ 0.3
PDLIM3-210ENST00000514308 CCDC88AQ3V6T2 1871 aa16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 IQCA1LA6NCM1 817 aa16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 FZD9O00144 591 aa16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 VAMP4O75379 141 aa16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 PCCAP05165 728 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 DPP8Q6V1X1 898 aaPredicted RBP16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 LARGE2Q8N3Y3 721 aa16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 SUPT20HQ8NEM7 779 aa16.9■□□□□ 0.3
PDLIM3-210ENST00000514308 APLP1P51693 650 aa16.89■□□□□ 0.29
PDLIM3-210ENST00000514308 FLIIQ13045 1269 aa16.89■□□□□ 0.29
PDLIM3-210ENST00000514308 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
PDLIM3-210ENST00000514308 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
PDLIM3-210ENST00000514308 DICER1Q9UPY3 1922 aaKnown RBP16.89■□□□□ 0.29
PDLIM3-210ENST00000514308 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
PDLIM3-210ENST00000514308 POTECB2RU33 542 aa16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 PPIP5K2O43314 1243 aa16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 EIF6P56537 245 aaKnown RBP16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 G2E3Q7L622 706 aa16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 SLC51AQ86UW1 340 aa16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 MPNDQ8N594 471 aa16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
PDLIM3-210ENST00000514308 WDR90Q96KV7 1748 aa16.87■□□□□ 0.29
PDLIM3-210ENST00000514308 CCDC152Q4G0S7 254 aa16.87■□□□□ 0.29
PDLIM3-210ENST00000514308 NIM1KQ8IY84 436 aa16.87■□□□□ 0.29
PDLIM3-210ENST00000514308 GPC2Q8N158 579 aa16.87■□□□□ 0.29
PDLIM3-210ENST00000514308 RTFDC1Q9BY42 306 aaPredicted RBP16.87■□□□□ 0.29
PDLIM3-210ENST00000514308 PDE8AO60658 829 aa16.86■□□□□ 0.29
PDLIM3-210ENST00000514308 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
PDLIM3-210ENST00000514308 CELF1Q92879 486 aaKnown RBP16.86■□□□□ 0.29
PDLIM3-210ENST00000514308 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
PDLIM3-210ENST00000514308 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
PDLIM3-210ENST00000514308 CEP350Q5VT06 3117 aa16.86■□□□□ 0.29
PDLIM3-210ENST00000514308 NEURL1BA8MQ27 555 aa16.85■□□□□ 0.29
PDLIM3-210ENST00000514308 RPS8P62241 208 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-210ENST00000514308 AOC3Q16853 763 aa16.85■□□□□ 0.29
PDLIM3-210ENST00000514308 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
PDLIM3-210ENST00000514308 JARID2Q92833 1246 aaPredicted RBP16.85■□□□□ 0.29
PDLIM3-210ENST00000514308 CDHR2Q9BYE9 1310 aa16.85■□□□□ 0.29
PDLIM3-210ENST00000514308 LAMB2P55268 1798 aa16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 DNAAF4Q8WXU2 420 aa16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 TAF1DQ9H5J8 278 aaPredicted RBP16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 NSFL1CQ9UNZ2 370 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 GJA3Q9Y6H8 435 aa16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 DDX60Q8IY21 1712 aaKnown RBP16.84■□□□□ 0.29
PDLIM3-210ENST00000514308 KIAA2012Q0VF49 1180 aa16.83■□□□□ 0.28
PDLIM3-210ENST00000514308 LINS1Q8NG48 757 aa16.83■□□□□ 0.28
PDLIM3-210ENST00000514308 ZNRF3Q9ULT6 936 aa16.83■□□□□ 0.28
PDLIM3-210ENST00000514308 E9PSI1 815 aa16.82■□□□□ 0.28
PDLIM3-210ENST00000514308 CTSWP56202 376 aa16.82■□□□□ 0.28
PDLIM3-210ENST00000514308 GCKRQ14397 625 aa16.82■□□□□ 0.28
PDLIM3-210ENST00000514308 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
PDLIM3-210ENST00000514308 UBE3BQ7Z3V4 1068 aa16.82■□□□□ 0.28
PDLIM3-210ENST00000514308 PNMA8AQ86V59 439 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-210ENST00000514308 COL4A5P29400 1685 aa16.81■□□□□ 0.28
PDLIM3-210ENST00000514308 LMOD1P29536 600 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-210ENST00000514308 EPHX2P34913 555 aa16.81■□□□□ 0.28
PDLIM3-210ENST00000514308 LDHDQ86WU2 507 aa16.81■□□□□ 0.28
PDLIM3-210ENST00000514308 CCDC85AQ96PX6 553 aaPredicted RBP16.81■□□□□ 0.28
PDLIM3-210ENST00000514308 SEC31BQ9NQW1 1179 aa16.81■□□□□ 0.28
PDLIM3-210ENST00000514308 C6orf229H3BNL8 230 aa16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 H7C1W4 665 aa16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 GPSM2P81274 684 aa16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 WASHC4Q2M389 1173 aa16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 EAPPQ56P03 285 aaPredicted RBP16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 ANKRD18AQ8IVF6 992 aa16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 CDC5LQ99459 802 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-210ENST00000514308 POTEIP0CG38 1075 aa16.79■□□□□ 0.28
PDLIM3-210ENST00000514308 POTEJP0CG39 1038 aa16.79■□□□□ 0.28
PDLIM3-210ENST00000514308 TTLL11Q8NHH1 800 aa16.79■□□□□ 0.28
PDLIM3-210ENST00000514308 EYA3Q99504 573 aa16.79■□□□□ 0.28
PDLIM3-210ENST00000514308 ANKIB1Q9P2G1 1089 aa16.79■□□□□ 0.28
PDLIM3-210ENST00000514308 SCN4AP35499 1836 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 F6X3S4 739 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 CXCL9Q07325 125 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 TNIP1Q15025 636 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 PODXL2Q9NZ53 605 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 POLLQ9UGP5 575 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 CLEC11AQ9Y240 323 aa16.78■□□□□ 0.28
PDLIM3-210ENST00000514308 LRRC37AA6NMS7 1700 aa16.77■□□□□ 0.28
PDLIM3-210ENST00000514308 SCNN1DP51172 638 aa16.77■□□□□ 0.28
PDLIM3-210ENST00000514308 CIAPIN1Q6FI81 312 aa16.77■□□□□ 0.28
PDLIM3-210ENST00000514308 TBC1D16Q8TBP0 767 aa16.77■□□□□ 0.28
PDLIM3-210ENST00000514308 GREM2Q9H772 168 aa16.77■□□□□ 0.28
PDLIM3-210ENST00000514308 DUOX1Q9NRD9 1551 aa16.77■□□□□ 0.27
PDLIM3-210ENST00000514308 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
PDLIM3-210ENST00000514308 RIMBP2O15034 1052 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 HTRA3P83110 453 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 SLFN5Q08AF3 891 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 BEND3Q5T5X7 828 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 PLA2G12BQ9BX93 195 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 GGA1Q9UJY5 639 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 TAF1P21675 1872 aa16.76■□□□□ 0.27
PDLIM3-210ENST00000514308 XDHP47989 1333 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 RAD17O75943 681 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 UFL1O94874 794 aa16.75■□□□□ 0.27
PDLIM3-210ENST00000514308 CASP7P55210 303 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms