RNA–Protein interactions for RNA: ENST00000514219.1

TRIM41-206, Transcript of tripartite motif containing 41, humanhuman

TSL 5

Gene TRIM41, Length 459 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-206ENST00000514219 SH3TC1Q8TE82 1336 aa19.86■□□□□ 0.77
TRIM41-206ENST00000514219 NPHP1O15259 732 aa19.86■□□□□ 0.77
TRIM41-206ENST00000514219 HDAC1Q13547 482 aaPredicted RBP19.86■□□□□ 0.77
TRIM41-206ENST00000514219 HLFQ16534 295 aa19.86■□□□□ 0.77
TRIM41-206ENST00000514219 DALRD3Q5D0E6 543 aaKnown RBP19.86■□□□□ 0.77
TRIM41-206ENST00000514219 UBE3BQ7Z3V4 1068 aa19.86■□□□□ 0.77
TRIM41-206ENST00000514219 TRMT112Q9UI30 125 aaKnown RBP19.86■□□□□ 0.77
TRIM41-206ENST00000514219 H7C1W4 665 aa19.85■□□□□ 0.77
TRIM41-206ENST00000514219 GTF2E1P29083 439 aaPredicted RBP19.85■□□□□ 0.77
TRIM41-206ENST00000514219 ZBTB47Q9UFB7 747 aaPredicted RBP19.85■□□□□ 0.77
TRIM41-206ENST00000514219 GPTP24298 496 aa19.84■□□□□ 0.77
TRIM41-206ENST00000514219 HSP90AB4PQ58FF6 505 aa19.84■□□□□ 0.77
TRIM41-206ENST00000514219 TPTE2Q6XPS3 522 aa19.84■□□□□ 0.77
TRIM41-206ENST00000514219 ANKRD44Q8N8A2 993 aa19.84■□□□□ 0.77
TRIM41-206ENST00000514219 LRRFIP2Q9Y608 721 aaKnown RBP19.84■□□□□ 0.77
TRIM41-206ENST00000514219 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.77
TRIM41-206ENST00000514219 MTX1Q13505 466 aa19.83■□□□□ 0.77
TRIM41-206ENST00000514219 NBPF5PQ86XG9 351 aaPredicted RBP19.83■□□□□ 0.77
TRIM41-206ENST00000514219 GCC1Q96CN9 775 aa19.83■□□□□ 0.77
TRIM41-206ENST00000514219 PLA2G12BQ9BX93 195 aa19.83■□□□□ 0.77
TRIM41-206ENST00000514219 LAMB2P55268 1798 aa19.83■□□□□ 0.76
TRIM41-206ENST00000514219 CEP85Q6P2H3 762 aa19.81■□□□□ 0.76
TRIM41-206ENST00000514219 ZC3H4Q9UPT8 1303 aaKnown RBP19.8■□□□□ 0.76
TRIM41-206ENST00000514219 RIC1Q4ADV7 1423 aa19.8■□□□□ 0.76
TRIM41-206ENST00000514219 ST5P78524 1137 aa19.8■□□□□ 0.76
TRIM41-206ENST00000514219 SRP68Q9UHB9 627 aaKnown RBP19.8■□□□□ 0.76
TRIM41-206ENST00000514219 UBN2Q6ZU65 1347 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 PDE8AO60658 829 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 SLC34A2O95436 690 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 CHRNA5P30532 468 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 ATP8B2P98198 1209 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 TBC1D9BQ66K14 1250 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 CNBD1Q8NA66 436 aa19.79■□□□□ 0.76
TRIM41-206ENST00000514219 MYH3P11055 1940 aa19.78■□□□□ 0.76
TRIM41-206ENST00000514219 IRS4O14654 1257 aaPredicted RBP19.78■□□□□ 0.76
TRIM41-206ENST00000514219 SRGAP3O43295 1099 aa19.78■□□□□ 0.76
TRIM41-206ENST00000514219 VEGFAP15692 232 aaPredicted RBP19.78■□□□□ 0.76
TRIM41-206ENST00000514219 RABL6Q3YEC7 729 aaPredicted RBP19.78■□□□□ 0.76
TRIM41-206ENST00000514219 C1orf115Q9H7X2 142 aa19.78■□□□□ 0.76
TRIM41-206ENST00000514219 BCL2L12Q9HB09 334 aa19.78■□□□□ 0.76
TRIM41-206ENST00000514219 PCDHB15Q9Y5E8 787 aa19.78■□□□□ 0.76
TRIM41-206ENST00000514219 NTSR2O95665 410 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 CASP7P55210 303 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 RASSF7Q02833 373 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 DDR1Q08345 913 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 SUSD4Q5VX71 490 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 ERC1Q8IUD2 1116 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 SUCLG2Q96I99 432 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 BICC1Q9H694 974 aaKnown RBP19.77■□□□□ 0.76
TRIM41-206ENST00000514219 FBXO3Q9UK99 471 aa19.77■□□□□ 0.76
TRIM41-206ENST00000514219 NFIXQ14938 502 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 CCDC57Q2TAC2 916 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 CCDC152Q4G0S7 254 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 B4GALNT3Q6L9W6 998 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 BICDL1Q6ZP65 573 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 SSH3Q8TE77 659 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 FAM89AQ96GI7 184 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 TIAM2Q8IVF5 1701 aa19.76■□□□□ 0.75
TRIM41-206ENST00000514219 RTL9Q8NET4 1388 aa19.75■□□□□ 0.75
TRIM41-206ENST00000514219 GLTPD2A6NH11 291 aa19.75■□□□□ 0.75
TRIM41-206ENST00000514219 CTSWP56202 376 aa19.75■□□□□ 0.75
TRIM41-206ENST00000514219 PDZRN3Q9UPQ7 1066 aa19.75■□□□□ 0.75
TRIM41-206ENST00000514219 RAB11FIP3O75154 756 aa19.74■□□□□ 0.75
TRIM41-206ENST00000514219 IFIT5Q13325 482 aaKnown RBP19.74■□□□□ 0.75
TRIM41-206ENST00000514219 SLC10A5Q5PT55 438 aa19.74■□□□□ 0.75
TRIM41-206ENST00000514219 NLRP3Q96P20 1036 aa19.74■□□□□ 0.75
TRIM41-206ENST00000514219 CHMP3Q9Y3E7 222 aa19.74■□□□□ 0.75
TRIM41-206ENST00000514219 LMNB1P20700 586 aa19.73■□□□□ 0.75
TRIM41-206ENST00000514219 TM4SF1P30408 202 aa19.73■□□□□ 0.75
TRIM41-206ENST00000514219 POLA2Q14181 598 aa19.73■□□□□ 0.75
TRIM41-206ENST00000514219 TAF7LQ5H9L4 462 aa19.73■□□□□ 0.75
TRIM41-206ENST00000514219 LMBR1LQ6UX01 489 aa19.72■□□□□ 0.75
TRIM41-206ENST00000514219 SMC5Q8IY18 1101 aa19.72■□□□□ 0.75
TRIM41-206ENST00000514219 CDC5LQ99459 802 aaKnown RBP19.72■□□□□ 0.75
TRIM41-206ENST00000514219 DCTPP1Q9H773 170 aa19.72■□□□□ 0.75
TRIM41-206ENST00000514219 ANKRD18BA2A2Z9 1011 aa19.71■□□□□ 0.75
TRIM41-206ENST00000514219 POLRMTO00411 1230 aaKnown RBP19.71■□□□□ 0.75
TRIM41-206ENST00000514219 SERPINB2P05120 415 aa19.71■□□□□ 0.75
TRIM41-206ENST00000514219 CSF1RP07333 972 aa19.71■□□□□ 0.75
TRIM41-206ENST00000514219 FOXO4P98177 505 aa19.71■□□□□ 0.75
TRIM41-206ENST00000514219 OS9Q13438 667 aaPredicted RBP19.71■□□□□ 0.75
TRIM41-206ENST00000514219 RTL5Q5HYW3 569 aaPredicted RBP19.71■□□□□ 0.75
TRIM41-206ENST00000514219 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
TRIM41-206ENST00000514219 FAM177BA6PVY3 158 aa19.7■□□□□ 0.74
TRIM41-206ENST00000514219 G3BP1Q13283 466 aaKnown RBP eCLIP19.7■□□□□ 0.74
TRIM41-206ENST00000514219 NRXN2Q9P2S2 1712 aa19.7■□□□□ 0.74
TRIM41-206ENST00000514219 DLEC1Q9Y238 1755 aa19.7■□□□□ 0.74
TRIM41-206ENST00000514219 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
TRIM41-206ENST00000514219 COPRSQ9NQ92 184 aa19.69■□□□□ 0.74
TRIM41-206ENST00000514219 NOP58Q9Y2X3 529 aaKnown RBP19.69■□□□□ 0.74
TRIM41-206ENST00000514219 PNMA6EA0A0J9YXQ4 647 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 SURF6O75683 361 aaKnown RBP19.68■□□□□ 0.74
TRIM41-206ENST00000514219 CIAO1O76071 339 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 PDE6BP35913 854 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 SF3B3Q15393 1217 aaKnown RBP19.68■□□□□ 0.74
TRIM41-206ENST00000514219 ERFEQ4G0M1 354 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 SIRT2Q8IXJ6 389 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 TTLL11Q8NHH1 800 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 KIF1BPQ96EK5 621 aa19.68■□□□□ 0.74
TRIM41-206ENST00000514219 KAZALD1Q96I82 304 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms