RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 CWC25Q9NXE8 425 aaPredicted RBP10.44□□□□□ -0.74
NEDD4-210ENST00000513957 TRMT112Q9UI30 125 aaKnown RBP10.44□□□□□ -0.74
NEDD4-210ENST00000513957 MAP3K2Q9Y2U5 619 aa10.44□□□□□ -0.74
NEDD4-210ENST00000513957 ZC3H4Q9UPT8 1303 aaKnown RBP10.43□□□□□ -0.74
NEDD4-210ENST00000513957 NUTM1Q86Y26 1132 aa10.43□□□□□ -0.74
NEDD4-210ENST00000513957 RPGRQ92834 1020 aaKnown RBP10.43□□□□□ -0.74
NEDD4-210ENST00000513957 ZNF622Q969S3 477 aaKnown RBP eCLIP10.43□□□□□ -0.741e-6■■■■□ 25.6
NEDD4-210ENST00000513957 CRAMP1Q96RY5 1269 aa10.43□□□□□ -0.74
NEDD4-210ENST00000513957 CDHR2Q9BYE9 1310 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 LTBP3Q9NS15 1303 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 FAM177BA6PVY3 158 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 PCCAP05165 728 aaPredicted RBP10.42□□□□□ -0.74
NEDD4-210ENST00000513957 CC2D2BQ6DHV5 1058 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 PRPF40BQ6NWY9 871 aaKnown RBP10.42□□□□□ -0.74
NEDD4-210ENST00000513957 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.42□□□□□ -0.74
NEDD4-210ENST00000513957 TMC4Q7Z404 712 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 LINS1Q8NG48 757 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 DNAAF4Q8WXU2 420 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 RBM17Q96I25 401 aaKnown RBP10.42□□□□□ -0.74
NEDD4-210ENST00000513957 MYD88Q99836 296 aa10.42□□□□□ -0.74
NEDD4-210ENST00000513957 ATP5J2-PTCD1G3V325 749 aa10.41□□□□□ -0.74
NEDD4-210ENST00000513957 YY1P25490 414 aa10.41□□□□□ -0.74
NEDD4-210ENST00000513957 G2E3Q7L622 706 aa10.41□□□□□ -0.74
NEDD4-210ENST00000513957 CCDC24Q8N4L8 307 aa10.41□□□□□ -0.74
NEDD4-210ENST00000513957 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
NEDD4-210ENST00000513957 KIF16BQ96L93 1317 aa10.4□□□□□ -0.74
NEDD4-210ENST00000513957 NEURL1BA8MQ27 555 aa10.4□□□□□ -0.74
NEDD4-210ENST00000513957 IGKV5-2P06315 115 aa10.4□□□□□ -0.74
NEDD4-210ENST00000513957 GSE1Q14687 1217 aa10.4□□□□□ -0.74
NEDD4-210ENST00000513957 SF3B3Q15393 1217 aaKnown RBP10.4□□□□□ -0.74
NEDD4-210ENST00000513957 CCDC93Q567U6 631 aa10.4□□□□□ -0.74
NEDD4-210ENST00000513957 TAF1P21675 1872 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 IRS4O14654 1257 aaPredicted RBP10.39□□□□□ -0.75
NEDD4-210ENST00000513957 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
NEDD4-210ENST00000513957 ALDH1L1O75891 902 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 BBOX1O75936 387 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 ARHGAP27Q6ZUM4 889 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 RTKN2Q8IZC4 609 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
NEDD4-210ENST00000513957 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 SSH1Q8WYL5 1049 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 FAM89AQ96GI7 184 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 TMX4Q9H1E5 349 aaPredicted RBP10.39□□□□□ -0.75
NEDD4-210ENST00000513957 SMC4Q9NTJ3 1288 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 SNED1Q8TER0 1413 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 RTL9Q8NET4 1388 aa10.39□□□□□ -0.75
NEDD4-210ENST00000513957 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 SPEF2Q9C093 1822 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 PDE8AO60658 829 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 LMNB1P20700 586 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 GCKRQ14397 625 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 CCDC152Q4G0S7 254 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 BEND3Q5T5X7 828 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 DDX46Q7L014 1031 aaKnown RBP10.38□□□□□ -0.75
NEDD4-210ENST00000513957 PLA2G12BQ9BX93 195 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 TAOK3Q9H2K8 898 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 WWC3Q9ULE0 1092 aa10.38□□□□□ -0.75
NEDD4-210ENST00000513957 ABCC4O15439 1325 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 H7C1W4 665 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 PPEF1O14829 653 aaPredicted RBP10.37□□□□□ -0.75
NEDD4-210ENST00000513957 C21orf2O43822 256 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 HCLS1P14317 486 aaPredicted RBP10.37□□□□□ -0.75
NEDD4-210ENST00000513957 GRAPQ13588 217 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 CWF19L2Q2TBE0 894 aaKnown RBP10.37□□□□□ -0.75
NEDD4-210ENST00000513957 GRAPLQ8TC17 118 aaPredicted RBP10.37□□□□□ -0.75
NEDD4-210ENST00000513957 ARHGAP45Q92619 1136 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 PSMD1Q99460 953 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 SRCIN1Q9C0H9 1055 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 VPS33BQ9H267 617 aa10.37□□□□□ -0.75
NEDD4-210ENST00000513957 NFKBIEO00221 500 aa10.36□□□□□ -0.75
NEDD4-210ENST00000513957 GRM8O00222 908 aa10.36□□□□□ -0.75
NEDD4-210ENST00000513957 RIOK3O14730 519 aaKnown RBP10.36□□□□□ -0.75
NEDD4-210ENST00000513957 RARSP54136 660 aaKnown RBP10.36□□□□□ -0.75
NEDD4-210ENST00000513957 CTSWP56202 376 aa10.36□□□□□ -0.75
NEDD4-210ENST00000513957 FKBP4Q02790 459 aaKnown RBP eCLIP10.36□□□□□ -0.75
NEDD4-210ENST00000513957 RNF25Q96BH1 459 aaPredicted RBP10.36□□□□□ -0.75
NEDD4-210ENST00000513957 API5Q9BZZ5 524 aaKnown RBP10.36□□□□□ -0.75
NEDD4-210ENST00000513957 ATP6V0A2Q9Y487 856 aa10.36□□□□□ -0.75
NEDD4-210ENST00000513957 A0A1B0GUL6 1792 aa10.36□□□□□ -0.75
NEDD4-210ENST00000513957 UTYO14607 1347 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 F6X3S4 739 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 IPO8O15397 1037 aaKnown RBP10.35□□□□□ -0.75
NEDD4-210ENST00000513957 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 UBE3BQ7Z3V4 1068 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 SP8Q8IXZ3 490 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 SYNE4Q8N205 404 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 CDC5LQ99459 802 aaKnown RBP10.35□□□□□ -0.75
NEDD4-210ENST00000513957 SCN4AP35499 1836 aa10.35□□□□□ -0.75
NEDD4-210ENST00000513957 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
NEDD4-210ENST00000513957 CCT4P50991 539 aaKnown RBP10.34□□□□□ -0.75
NEDD4-210ENST00000513957 CASP7P55210 303 aa10.34□□□□□ -0.75
NEDD4-210ENST00000513957 C9orf131Q5VYM1 1079 aa10.34□□□□□ -0.75
NEDD4-210ENST00000513957 SUPT20HQ8NEM7 779 aa10.34□□□□□ -0.75
NEDD4-210ENST00000513957 C9orf78Q9NZ63 289 aaPredicted RBP10.34□□□□□ -0.75
NEDD4-210ENST00000513957 RNF181Q9P0P0 153 aa10.34□□□□□ -0.75
NEDD4-210ENST00000513957 HDAC5Q9UQL6 1122 aa10.34□□□□□ -0.75
NEDD4-210ENST00000513957 PSME4Q14997 1843 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 RPS8P62241 208 aaKnown RBP10.33□□□□□ -0.76
NEDD4-210ENST00000513957 RASSF7Q02833 373 aa10.33□□□□□ -0.76
NEDD4-210ENST00000513957 RTL5Q5HYW3 569 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms