RNA–Protein interactions for RNA: ENST00000513595.1

FOXD1-201, Transcript of forkhead box D1, humanhuman

TSL 3

Gene FOXD1, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD1-201ENST00000513595 HHIPL1Q96JK4 782 aa17.02■□□□□ 0.32
FOXD1-201ENST00000513595 SLC52A2Q9HAB3 445 aa17.02■□□□□ 0.32
FOXD1-201ENST00000513595 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
FOXD1-201ENST00000513595 COL11A2P13942 1736 aaPredicted RBP17.01■□□□□ 0.31
FOXD1-201ENST00000513595 MRC1P22897 1456 aa17.01■□□□□ 0.31
FOXD1-201ENST00000513595 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
FOXD1-201ENST00000513595 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
FOXD1-201ENST00000513595 CNBD1Q8NA66 436 aa17.01■□□□□ 0.31
FOXD1-201ENST00000513595 TSPYL2Q9H2G4 693 aaPredicted RBP17.01■□□□□ 0.31
FOXD1-201ENST00000513595 SCN11AQ9UI33 1791 aa17.01■□□□□ 0.31
FOXD1-201ENST00000513595 LMOD1P29536 600 aaPredicted RBP17■□□□□ 0.31
FOXD1-201ENST00000513595 RARSP54136 660 aaKnown RBP17■□□□□ 0.31
FOXD1-201ENST00000513595 ST5P78524 1137 aa17■□□□□ 0.31
FOXD1-201ENST00000513595 SLC39A6Q13433 755 aa17■□□□□ 0.31
FOXD1-201ENST00000513595 SETDB2Q96T68 719 aa17■□□□□ 0.31
FOXD1-201ENST00000513595 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
FOXD1-201ENST00000513595 CELF2O95319 508 aaKnown RBP16.99■□□□□ 0.31
FOXD1-201ENST00000513595 IARSP41252 1262 aaKnown RBP16.99■□□□□ 0.31
FOXD1-201ENST00000513595 ALDH1L2Q3SY69 923 aa16.99■□□□□ 0.31
FOXD1-201ENST00000513595 TRPM7Q96QT4 1865 aa16.99■□□□□ 0.31
FOXD1-201ENST00000513595 NPHP1O15259 732 aa16.98■□□□□ 0.31
FOXD1-201ENST00000513595 VAMP4O75379 141 aa16.98■□□□□ 0.31
FOXD1-201ENST00000513595 STARD3NLO95772 234 aa16.98■□□□□ 0.31
FOXD1-201ENST00000513595 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
FOXD1-201ENST00000513595 USP50Q70EL3 339 aaPredicted RBP16.98■□□□□ 0.31
FOXD1-201ENST00000513595 ZIC5Q96T25 663 aa16.98■□□□□ 0.31
FOXD1-201ENST00000513595 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
FOXD1-201ENST00000513595 GJA3Q9Y6H8 435 aa16.98■□□□□ 0.31
FOXD1-201ENST00000513595 SIPA1L3O60292 1781 aaPredicted RBP16.97■□□□□ 0.31
FOXD1-201ENST00000513595 A0A0C4DFX4 3053 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 NPR1P16066 1061 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 EPS15P42566 896 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 ERICH6BQ5W0A0 696 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 CTU1Q7Z7A3 348 aaKnown RBP16.97■□□□□ 0.31
FOXD1-201ENST00000513595 SYNE4Q8N205 404 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 CHMP4AQ9BY43 222 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 KDM3BQ7LBC6 1761 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 CACNA1SQ13698 1873 aa16.97■□□□□ 0.31
FOXD1-201ENST00000513595 SCNN1DP51172 638 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 NOGQ13253 232 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 OLFM4Q6UX06 510 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 SLC17A8Q8NDX2 589 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 JDP2Q8WYK2 163 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 ZNF408Q9H9D4 720 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
FOXD1-201ENST00000513595 KLRG2A4D1S0 409 aaPredicted RBP16.95■□□□□ 0.3
FOXD1-201ENST00000513595 HOXB7P09629 217 aa16.95■□□□□ 0.3
FOXD1-201ENST00000513595 EIF6P56537 245 aaKnown RBP16.95■□□□□ 0.3
FOXD1-201ENST00000513595 RASEFQ8IZ41 740 aa16.95■□□□□ 0.3
FOXD1-201ENST00000513595 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
FOXD1-201ENST00000513595 POTEB2H3BUK9 544 aa16.94■□□□□ 0.3
FOXD1-201ENST00000513595 BCAR3O75815 825 aa16.94■□□□□ 0.3
FOXD1-201ENST00000513595 SMC4Q9NTJ3 1288 aa16.94■□□□□ 0.3
FOXD1-201ENST00000513595 ARFGEF2Q9Y6D5 1785 aa16.94■□□□□ 0.3
FOXD1-201ENST00000513595 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
FOXD1-201ENST00000513595 SZT2Q5T011 3432 aa16.93■□□□□ 0.3
FOXD1-201ENST00000513595 EIF4A1P60842 406 aaKnown RBP16.93■□□□□ 0.3
FOXD1-201ENST00000513595 SSH1Q8WYL5 1049 aa16.93■□□□□ 0.3
FOXD1-201ENST00000513595 PSMD1Q99460 953 aa16.93■□□□□ 0.3
FOXD1-201ENST00000513595 TRPA1O75762 1119 aa16.92■□□□□ 0.3
FOXD1-201ENST00000513595 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
FOXD1-201ENST00000513595 IL6STP40189 918 aaPredicted RBP16.92■□□□□ 0.3
FOXD1-201ENST00000513595 SAGE1Q9NXZ1 904 aa16.92■□□□□ 0.3
FOXD1-201ENST00000513595 ELL2O00472 640 aaPredicted RBP16.91■□□□□ 0.3
FOXD1-201ENST00000513595 MS4A1P11836 297 aa16.91■□□□□ 0.3
FOXD1-201ENST00000513595 ASTLQ6HA08 431 aaPredicted RBP16.91■□□□□ 0.3
FOXD1-201ENST00000513595 IPO8O15397 1037 aaKnown RBP16.9■□□□□ 0.3
FOXD1-201ENST00000513595 PDE3AQ14432 1141 aa16.9■□□□□ 0.3
FOXD1-201ENST00000513595 KRT24Q2M2I5 525 aa16.9■□□□□ 0.3
FOXD1-201ENST00000513595 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
FOXD1-201ENST00000513595 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
FOXD1-201ENST00000513595 KIF12Q96FN5 646 aa16.9■□□□□ 0.3
FOXD1-201ENST00000513595 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
FOXD1-201ENST00000513595 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
FOXD1-201ENST00000513595 MKI67P46013 3256 aaKnown RBP16.9■□□□□ 0.3
FOXD1-201ENST00000513595 HEG1Q9ULI3 1381 aa16.89■□□□□ 0.3
FOXD1-201ENST00000513595 ALDH1B1P30837 517 aa16.89■□□□□ 0.29
FOXD1-201ENST00000513595 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
FOXD1-201ENST00000513595 NBPF5PQ86XG9 351 aaPredicted RBP16.89■□□□□ 0.29
FOXD1-201ENST00000513595 BCL2L13Q9BXK5 485 aa16.89■□□□□ 0.29
FOXD1-201ENST00000513595 GLIS2Q9BZE0 524 aaPredicted RBP16.89■□□□□ 0.29
FOXD1-201ENST00000513595 ADARB2Q9NS39 739 aaKnown RBP16.89■□□□□ 0.29
FOXD1-201ENST00000513595 PGAP2Q9UHJ9 254 aa16.89■□□□□ 0.29
FOXD1-201ENST00000513595 ATMINO43313 823 aaPredicted RBP16.88■□□□□ 0.29
FOXD1-201ENST00000513595 KCNQ3O43525 872 aa16.88■□□□□ 0.29
FOXD1-201ENST00000513595 PLIN1O60240 522 aa16.88■□□□□ 0.29
FOXD1-201ENST00000513595 ZKSCAN2Q63HK3 967 aa16.88■□□□□ 0.29
FOXD1-201ENST00000513595 MRPL50Q8N5N7 158 aaKnown RBP16.88■□□□□ 0.29
FOXD1-201ENST00000513595 RNF186Q9NXI6 227 aa16.88■□□□□ 0.29
FOXD1-201ENST00000513595 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
FOXD1-201ENST00000513595 SNED1Q8TER0 1413 aa16.87■□□□□ 0.29
FOXD1-201ENST00000513595 HUNKP57058 714 aa16.87■□□□□ 0.29
FOXD1-201ENST00000513595 IRX6P78412 446 aaPredicted RBP16.87■□□□□ 0.29
FOXD1-201ENST00000513595 CC2D2BQ6DHV5 1058 aa16.87■□□□□ 0.29
FOXD1-201ENST00000513595 NPM2Q86SE8 214 aaKnown RBP16.87■□□□□ 0.29
FOXD1-201ENST00000513595 ARHGAP45Q92619 1136 aa16.87■□□□□ 0.29
FOXD1-201ENST00000513595 FRAT1Q92837 279 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms