RNA–Protein interactions for RNA: ENST00000513450.1

RNF4-219, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 416 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-219ENST00000513450 FMR1Q06787 632 aaKnown RBP eCLIP4.03□□□□□ -1.76
RNF4-219ENST00000513450 SPEM2Q0P670 501 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 DSC3Q14574 896 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 PMEPA1Q969W9 287 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 PNMA5Q96PV4 448 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 NIF3L1Q9GZT8 377 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 DNAJC25Q9H1X3 360 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 ELP3Q9H9T3 547 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 AVENQ9NQS1 362 aaPredicted RBP4.03□□□□□ -1.76
RNF4-219ENST00000513450 HCN2Q9UL51 889 aa4.03□□□□□ -1.76
RNF4-219ENST00000513450 GPR25O00155 361 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 TNFRSF21O75509 655 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 MAP3K6O95382 1288 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 BMP4P12644 408 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 CD33P20138 364 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 MX2P20592 715 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 EAPPQ56P03 285 aaPredicted RBP4.02□□□□□ -1.77
RNF4-219ENST00000513450 TTC39BQ5VTQ0 682 aaPredicted RBP4.02□□□□□ -1.77
RNF4-219ENST00000513450 SNX29Q8TEQ0 813 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 SLC30A3Q99726 388 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 MBIPQ9NS73 344 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 ABI2Q9NYB9 513 aaPredicted RBP4.02□□□□□ -1.77
RNF4-219ENST00000513450 TMEM63CQ9P1W3 806 aa4.02□□□□□ -1.77
RNF4-219ENST00000513450 NSFL1CQ9UNZ2 370 aaKnown RBP4.02□□□□□ -1.77
RNF4-219ENST00000513450 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.02□□□□□ -1.77
RNF4-219ENST00000513450 RBM47A0AV96 593 aaKnown RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 A6NHS1 94 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 CPNE3O75131 537 aaKnown RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 SASH3O75995 380 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 P4HBP07237 508 aaKnown RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 RARAP10276 462 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 HOXD8P13378 290 aaPredicted RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 NFKB1P19838 968 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 TARSP26639 723 aaKnown RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 SOX18P35713 384 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 MAP2K3P46734 347 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 CTBSQ01459 385 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 RASSF7Q02833 373 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 GAS6Q14393 721 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 ENOX2Q16206 610 aaKnown RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 ZNF468Q5VIY5 522 aaPredicted RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 FBXO33Q7Z6M2 555 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 GPR161Q8N6U8 529 aaKnown RBP4.01□□□□□ -1.77
RNF4-219ENST00000513450 BHMTQ93088 406 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 CSRNP1Q96S65 589 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 BCL2L13Q9BXK5 485 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 PRR12Q9ULL5 1215 aa4.01□□□□□ -1.77
RNF4-219ENST00000513450 RNF225M0QZC1 329 aaPredicted RBP4□□□□□ -1.77
RNF4-219ENST00000513450 C2CD2LO14523 706 aa4□□□□□ -1.77
RNF4-219ENST00000513450 EIF1AYO14602 144 aaKnown RBP4□□□□□ -1.77
RNF4-219ENST00000513450 PHACTR2O75167 634 aa4□□□□□ -1.77
RNF4-219ENST00000513450 SIN3BO75182 1162 aa4□□□□□ -1.77
RNF4-219ENST00000513450 PSAPP07602 524 aa4□□□□□ -1.77
RNF4-219ENST00000513450 ARAFP10398 606 aa4□□□□□ -1.77
RNF4-219ENST00000513450 MAPK8P45983 427 aa4□□□□□ -1.77
RNF4-219ENST00000513450 ATP2B2Q01814 1243 aa4□□□□□ -1.77
RNF4-219ENST00000513450 GRIN2CQ14957 1233 aa4□□□□□ -1.77
RNF4-219ENST00000513450 PCSK7Q16549 785 aa4□□□□□ -1.77
RNF4-219ENST00000513450 ZNF326Q5BKZ1 582 aaKnown RBP4□□□□□ -1.77
RNF4-219ENST00000513450 ALG1LQ6GMV1 187 aa4□□□□□ -1.77
RNF4-219ENST00000513450 GPAT2Q6NUI2 795 aa4□□□□□ -1.77
RNF4-219ENST00000513450 DHX32Q7L7V1 743 aaKnown RBP4□□□□□ -1.77
RNF4-219ENST00000513450 KRT25Q7Z3Z0 450 aa4□□□□□ -1.77
RNF4-219ENST00000513450 OR13H1Q8NG92 308 aa4□□□□□ -1.77
RNF4-219ENST00000513450 FBF1Q8TES7 1133 aa4□□□□□ -1.77
RNF4-219ENST00000513450 FOXD4L4Q8WXT5 416 aaPredicted RBP4□□□□□ -1.77
RNF4-219ENST00000513450 BCL11AQ9H165 835 aa4□□□□□ -1.77
RNF4-219ENST00000513450 ZFYVE28Q9HCC9 887 aa4□□□□□ -1.77
RNF4-219ENST00000513450 TLR7Q9NYK1 1049 aaKnown RBP4□□□□□ -1.77
RNF4-219ENST00000513450 ZFATQ9P243 1243 aa4□□□□□ -1.77
RNF4-219ENST00000513450 PNMA6FA0A0J9YX94 578 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 PHF20L1A8MW92 1017 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 MMP20O60882 483 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 PRPF40AO75400 957 aaKnown RBP3.99□□□□□ -1.77
RNF4-219ENST00000513450 LDHBP07195 334 aaKnown RBP3.99□□□□□ -1.77
RNF4-219ENST00000513450 CES1P23141 567 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 ADH6P28332 368 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 NRLP54845 237 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 PLAURQ03405 335 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 SRSF11Q05519 484 aaKnown RBP3.99□□□□□ -1.77
RNF4-219ENST00000513450 ORC1Q13415 861 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 XP32Q5T750 250 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 SYT9Q86SS6 491 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 C1orf127Q8N9H9 656 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 TRPM4Q8TD43 1214 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 GIPC2Q8TF65 315 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 TNFRSF25Q93038 417 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 COL25A1Q9BXS0 654 aaPredicted RBP3.99□□□□□ -1.77
RNF4-219ENST00000513450 CHRDQ9H2X0 955 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 CNTN3Q9P232 1028 aa3.99□□□□□ -1.77
RNF4-219ENST00000513450 FOXD3Q9UJU5 478 aaPredicted RBP3.99□□□□□ -1.77
RNF4-219ENST00000513450 ADARB2-AS1A8MUL3 147 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 KIF4AO95239 1232 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 EDN3P14138 238 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 ZNF16P17020 682 aaPredicted RBP3.98□□□□□ -1.77
RNF4-219ENST00000513450 ITGAEP38570 1179 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 GSK3AP49840 483 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 GPLD1P80108 840 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 HYAL2Q12891 473 aa3.98□□□□□ -1.77
RNF4-219ENST00000513450 RNFT1Q5M7Z0 435 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms