RNA–Protein interactions for RNA: ENST00000513064.1

CHD1-210, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-210ENST00000513064 FZD6O60353 706 aa8.49□□□□□ -1.05
CHD1-210ENST00000513064 RPLP1P05386 114 aaKnown RBP8.49□□□□□ -1.05
CHD1-210ENST00000513064 ARHGAP4P98171 946 aa8.49□□□□□ -1.05
CHD1-210ENST00000513064 DNM1Q05193 864 aaKnown RBP8.49□□□□□ -1.05
CHD1-210ENST00000513064 ELOA3BQ3SY89 546 aa8.49□□□□□ -1.05
CHD1-210ENST00000513064 ELOA3Q8NG57 546 aa8.49□□□□□ -1.05
CHD1-210ENST00000513064 EDEM1Q92611 657 aa8.49□□□□□ -1.05
CHD1-210ENST00000513064 NUDT16Q96DE0 195 aaKnown RBP8.49□□□□□ -1.05
CHD1-210ENST00000513064 SOWAHDA6NJG2 315 aa8.48□□□□□ -1.05
CHD1-210ENST00000513064 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
CHD1-210ENST00000513064 PDGFAP04085 211 aa8.48□□□□□ -1.05
CHD1-210ENST00000513064 KRT25Q7Z3Z0 450 aa8.48□□□□□ -1.05
CHD1-210ENST00000513064 NLRP13Q86W25 1043 aa8.48□□□□□ -1.05
CHD1-210ENST00000513064 BTBD6Q96KE9 485 aa8.48□□□□□ -1.05
CHD1-210ENST00000513064 ADAMTS8Q9UP79 889 aa8.48□□□□□ -1.05
CHD1-210ENST00000513064 RARAP10276 462 aa8.47□□□□□ -1.05
CHD1-210ENST00000513064 PCSK2P16519 638 aa8.47□□□□□ -1.05
CHD1-210ENST00000513064 AAMPQ13685 434 aa8.47□□□□□ -1.05
CHD1-210ENST00000513064 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
CHD1-210ENST00000513064 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
CHD1-210ENST00000513064 ALAS2P22557 587 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 ADH7P40394 386 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 USP5P45974 858 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 XKR5Q6UX68 686 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 NEDD1Q8NHV4 660 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 CCDC87Q9NVE4 849 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 TLR7Q9NYK1 1049 aaKnown RBP8.46□□□□□ -1.06
CHD1-210ENST00000513064 POLIQ9UNA4 740 aa8.46□□□□□ -1.06
CHD1-210ENST00000513064 MMP20O60882 483 aa8.45□□□□□ -1.06
CHD1-210ENST00000513064 DHX32Q7L7V1 743 aaKnown RBP8.45□□□□□ -1.06
CHD1-210ENST00000513064 TRPM4Q8TD43 1214 aa8.45□□□□□ -1.06
CHD1-210ENST00000513064 DNAJB12Q9NXW2 375 aaKnown RBP8.45□□□□□ -1.06
CHD1-210ENST00000513064 HOXD8P13378 290 aaPredicted RBP8.44□□□□□ -1.06
CHD1-210ENST00000513064 HOXB4P17483 251 aaPredicted RBP8.44□□□□□ -1.06
CHD1-210ENST00000513064 SOX18P35713 384 aa8.44□□□□□ -1.06
CHD1-210ENST00000513064 PCSK7Q16549 785 aa8.44□□□□□ -1.06
CHD1-210ENST00000513064 CHSY3Q70JA7 882 aa8.44□□□□□ -1.06
CHD1-210ENST00000513064 UBE2OQ9C0C9 1292 aaKnown RBP8.44□□□□□ -1.06
CHD1-210ENST00000513064 IGFLR1Q9H665 355 aa8.44□□□□□ -1.06
CHD1-210ENST00000513064 ELP3Q9H9T3 547 aa8.44□□□□□ -1.06
CHD1-210ENST00000513064 ZBTB42B2RXF5 422 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 NRLP54845 237 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 GPLD1P80108 840 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 C8orf34Q49A92 452 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 AEBP1Q8IUX7 1158 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 GJD3Q8N144 294 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 TTC16Q8NEE8 873 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 ABI2Q9NYB9 513 aaPredicted RBP8.43□□□□□ -1.06
CHD1-210ENST00000513064 BRPF3Q9ULD4 1205 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 SLC6A14Q9UN76 642 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 STARD13Q9Y3M8 1113 aa8.43□□□□□ -1.06
CHD1-210ENST00000513064 PSAPP07602 524 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 AMPD1P23109 780 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 EHHADHQ08426 723 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 KANK3Q6NY19 840 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 ZNF438Q7Z4V0 828 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 OR13H1Q8NG92 308 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 CITED4Q96RK1 184 aa8.42□□□□□ -1.06
CHD1-210ENST00000513064 NDUFB5O43674 189 aa8.41□□□□□ -1.06
CHD1-210ENST00000513064 SNRPNP63162 240 aaKnown RBP8.41□□□□□ -1.06
CHD1-210ENST00000513064 PLAURQ03405 335 aa8.41□□□□□ -1.06
CHD1-210ENST00000513064 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
CHD1-210ENST00000513064 TTC39BQ5VTQ0 682 aaPredicted RBP8.41□□□□□ -1.06
CHD1-210ENST00000513064 TMEM63CQ9P1W3 806 aa8.41□□□□□ -1.06
CHD1-210ENST00000513064 A6NHS1 94 aa8.4□□□□□ -1.06
CHD1-210ENST00000513064 DGKGP49619 791 aa8.4□□□□□ -1.06
CHD1-210ENST00000513064 MARSP56192 900 aaKnown RBP8.4□□□□□ -1.06
CHD1-210ENST00000513064 C20orf204Q6ZNR8 217 aa8.4□□□□□ -1.06
CHD1-210ENST00000513064 BEND7Q8N7W2 519 aaPredicted RBP8.4□□□□□ -1.06
CHD1-210ENST00000513064 BIN2Q9UBW5 565 aaPredicted RBP8.4□□□□□ -1.06
CHD1-210ENST00000513064 LINC00114Q6XXX2 140 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 FAM35AQ86V20 835 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 SCARF2Q96GP6 870 aaPredicted RBP8.39□□□□□ -1.07
CHD1-210ENST00000513064 RBCK1Q9BYM8 510 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 RRAGCQ9HB90 399 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 PRDM6Q9NQX0 595 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 CNTN3Q9P232 1028 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 NAGPAQ9UK23 515 aa8.39□□□□□ -1.07
CHD1-210ENST00000513064 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 TNFRSF21O75509 655 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 ALBP02768 609 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 SIK1P57059 783 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 PDE3BQ13370 1112 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 FAM129BQ96TA1 746 aa8.38□□□□□ -1.07
CHD1-210ENST00000513064 M0R082 166 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 IGHA2P01877 340 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 CYP2E1P05181 493 aaPredicted RBP8.37□□□□□ -1.07
CHD1-210ENST00000513064 MLLT1Q03111 559 aaPredicted RBP8.37□□□□□ -1.07
CHD1-210ENST00000513064 PSAPL1Q6NUJ1 521 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 ZNF417Q8TAU3 575 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 NSUN5Q96P11 429 aaKnown RBP8.37□□□□□ -1.07
CHD1-210ENST00000513064 ZNF587Q96SQ5 575 aaPredicted RBP8.37□□□□□ -1.07
CHD1-210ENST00000513064 FRRS1LQ9P0K9 344 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 DCTN4Q9UJW0 460 aa8.37□□□□□ -1.07
CHD1-210ENST00000513064 MKL2Q9ULH7 1088 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms