RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 MTHFSDQ2M296 383 aaKnown RBP16.75■□□□□ 0.27
SDHA-215ENST00000512962 PANK3Q9H999 370 aa16.75■□□□□ 0.27
SDHA-215ENST00000512962 PCDHGA10Q9Y5H3 936 aa16.75■□□□□ 0.27
SDHA-215ENST00000512962 SNED1Q8TER0 1413 aa16.75■□□□□ 0.27
SDHA-215ENST00000512962 IQCA1LA6NCM1 817 aa16.74■□□□□ 0.27
SDHA-215ENST00000512962 CAMTA2O94983 1202 aa16.74■□□□□ 0.27
SDHA-215ENST00000512962 DEFB115Q30KQ5 88 aa16.74■□□□□ 0.27
SDHA-215ENST00000512962 STYK1Q6J9G0 422 aa16.74■□□□□ 0.27
SDHA-215ENST00000512962 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
SDHA-215ENST00000512962 ZNF277Q9NRM2 450 aaPredicted RBP16.74■□□□□ 0.27
SDHA-215ENST00000512962 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
SDHA-215ENST00000512962 TRPM7Q96QT4 1865 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 MAP3K7O43318 606 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 EPHX2P34913 555 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 SLC51AQ86UW1 340 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 PARP9Q8IXQ6 854 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 TSKSQ9UJT2 592 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 HEG1Q9ULI3 1381 aa16.73■□□□□ 0.27
SDHA-215ENST00000512962 CCDC85CA6NKD9 419 aa16.72■□□□□ 0.27
SDHA-215ENST00000512962 RGS19P49795 217 aa16.72■□□□□ 0.27
SDHA-215ENST00000512962 MLLT1Q03111 559 aaPredicted RBP16.72■□□□□ 0.27
SDHA-215ENST00000512962 CNTROBQ8N137 903 aa16.72■□□□□ 0.27
SDHA-215ENST00000512962 CNKSR1Q969H4 720 aa16.72■□□□□ 0.27
SDHA-215ENST00000512962 NPDC1Q9NQX5 325 aaPredicted RBP16.72■□□□□ 0.27
SDHA-215ENST00000512962 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
SDHA-215ENST00000512962 PIP4K2AP48426 406 aaPredicted RBP16.71■□□□□ 0.27
SDHA-215ENST00000512962 MORC1Q86VD1 984 aa16.71■□□□□ 0.27
SDHA-215ENST00000512962 MASTLQ96GX5 879 aa16.71■□□□□ 0.27
SDHA-215ENST00000512962 CASP8AP2Q9UKL3 1982 aa16.7■□□□□ 0.26
SDHA-215ENST00000512962 A1BGP04217 495 aa16.7■□□□□ 0.26
SDHA-215ENST00000512962 SLAIN1Q8ND83 568 aa16.7■□□□□ 0.26
SDHA-215ENST00000512962 FAM117AQ9C073 453 aa16.7■□□□□ 0.26
SDHA-215ENST00000512962 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
SDHA-215ENST00000512962 A0A087WZG4 1122 aa16.69■□□□□ 0.26
SDHA-215ENST00000512962 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
SDHA-215ENST00000512962 TSR1Q2NL82 804 aaKnown RBP16.69■□□□□ 0.26
SDHA-215ENST00000512962 CCDC93Q567U6 631 aa16.69■□□□□ 0.26
SDHA-215ENST00000512962 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
SDHA-215ENST00000512962 ABT1Q9ULW3 272 aaKnown RBP16.69■□□□□ 0.26
SDHA-215ENST00000512962 KCNQ3O43525 872 aa16.68■□□□□ 0.26
SDHA-215ENST00000512962 STARD3NLO95772 234 aa16.68■□□□□ 0.26
SDHA-215ENST00000512962 IL6STP40189 918 aaPredicted RBP16.68■□□□□ 0.26
SDHA-215ENST00000512962 CYP4F22Q6NT55 531 aa16.68■□□□□ 0.26
SDHA-215ENST00000512962 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
SDHA-215ENST00000512962 FZD9O00144 591 aa16.67■□□□□ 0.26
SDHA-215ENST00000512962 ST5P78524 1137 aa16.67■□□□□ 0.26
SDHA-215ENST00000512962 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
SDHA-215ENST00000512962 CAPNS2Q96L46 248 aa16.67■□□□□ 0.26
SDHA-215ENST00000512962 SETDB2Q96T68 719 aa16.67■□□□□ 0.26
SDHA-215ENST00000512962 PRAMEF22A3QJZ6 481 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 TRAF5O00463 557 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 AOC2O75106 756 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 GRM1Q13255 1194 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 ZNF790Q6PG37 636 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
SDHA-215ENST00000512962 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
SDHA-215ENST00000512962 IARSP41252 1262 aaKnown RBP16.65■□□□□ 0.26
SDHA-215ENST00000512962 CST9Q5W186 159 aa16.65■□□□□ 0.26
SDHA-215ENST00000512962 TTC5Q8N0Z6 440 aa16.65■□□□□ 0.26
SDHA-215ENST00000512962 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
SDHA-215ENST00000512962 SCNN1DP51172 638 aa16.64■□□□□ 0.25
SDHA-215ENST00000512962 DZIP3Q86Y13 1208 aaKnown RBP16.64■□□□□ 0.25
SDHA-215ENST00000512962 PCDH10Q9P2E7 1040 aa16.64■□□□□ 0.25
SDHA-215ENST00000512962 NPHP1O15259 732 aa16.63■□□□□ 0.25
SDHA-215ENST00000512962 NPR1P16066 1061 aa16.63■□□□□ 0.25
SDHA-215ENST00000512962 TTLL12Q14166 644 aaPredicted RBP16.63■□□□□ 0.25
SDHA-215ENST00000512962 PNMA8AQ86V59 439 aaPredicted RBP16.63■□□□□ 0.25
SDHA-215ENST00000512962 SYNE4Q8N205 404 aa16.63■□□□□ 0.25
SDHA-215ENST00000512962 FBXW7Q969H0 707 aa16.63■□□□□ 0.25
SDHA-215ENST00000512962 MCOLN1Q9GZU1 580 aa16.63■□□□□ 0.25
SDHA-215ENST00000512962 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
SDHA-215ENST00000512962 EPS15P42566 896 aa16.62■□□□□ 0.25
SDHA-215ENST00000512962 FOSBP53539 338 aa16.62■□□□□ 0.25
SDHA-215ENST00000512962 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
SDHA-215ENST00000512962 GPC2Q8N158 579 aa16.62■□□□□ 0.25
SDHA-215ENST00000512962 GPR101Q96P66 508 aaPredicted RBP16.62■□□□□ 0.25
SDHA-215ENST00000512962 FAM177BA6PVY3 158 aa16.61■□□□□ 0.25
SDHA-215ENST00000512962 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
SDHA-215ENST00000512962 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
SDHA-215ENST00000512962 GJA3Q9Y6H8 435 aa16.61■□□□□ 0.25
SDHA-215ENST00000512962 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
SDHA-215ENST00000512962 TLL2Q9Y6L7 1015 aa16.6■□□□□ 0.25
SDHA-215ENST00000512962 NUP98P52948 1817 aa16.59■□□□□ 0.25
SDHA-215ENST00000512962 HOXB3P14651 431 aaPredicted RBP16.59■□□□□ 0.25
SDHA-215ENST00000512962 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
SDHA-215ENST00000512962 LAMB4A4D0S4 1761 aa16.59■□□□□ 0.25
SDHA-215ENST00000512962 NBPF26B4DH59 902 aa16.58■□□□□ 0.24
SDHA-215ENST00000512962 POTEB2H3BUK9 544 aa16.58■□□□□ 0.24
SDHA-215ENST00000512962 TEFQ10587 303 aa16.58■□□□□ 0.24
SDHA-215ENST00000512962 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
SDHA-215ENST00000512962 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
SDHA-215ENST00000512962 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
SDHA-215ENST00000512962 KHSRPQ92945 711 aaKnown RBP eCLIP16.58■□□□□ 0.24
SDHA-215ENST00000512962 FMNL2Q96PY5 1086 aa16.58■□□□□ 0.24
SDHA-215ENST00000512962 TEX13AQ9BXU3 409 aaPredicted RBP16.58■□□□□ 0.24
SDHA-215ENST00000512962 NUDT7P0C024 238 aa16.57■□□□□ 0.24
SDHA-215ENST00000512962 HLFQ16534 295 aa16.57■□□□□ 0.24
SDHA-215ENST00000512962 DOK7Q18PE1 504 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms