RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 SDSP20132 328 aa16.08■□□□□ 0.16
DEPDC1B-206ENST00000512452 PIGBQ92521 554 aa16.08■□□□□ 0.16
DEPDC1B-206ENST00000512452 SUCLG2Q96I99 432 aa16.08■□□□□ 0.16
DEPDC1B-206ENST00000512452 MCOLN1Q9GZU1 580 aa16.08■□□□□ 0.16
DEPDC1B-206ENST00000512452 ATG3Q9NT62 314 aa16.08■□□□□ 0.16
DEPDC1B-206ENST00000512452 DLL1O00548 723 aa16.07■□□□□ 0.16
DEPDC1B-206ENST00000512452 PHF14O94880 888 aa16.07■□□□□ 0.16
DEPDC1B-206ENST00000512452 STARD3NLO95772 234 aa16.07■□□□□ 0.16
DEPDC1B-206ENST00000512452 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
DEPDC1B-206ENST00000512452 ZC3H4Q9UPT8 1303 aaKnown RBP16.07■□□□□ 0.16
DEPDC1B-206ENST00000512452 KIF13BQ9NQT8 1826 aa16.06■□□□□ 0.16
DEPDC1B-206ENST00000512452 TTC41PQ6P2S7 1318 aa16.06■□□□□ 0.16
DEPDC1B-206ENST00000512452 PTCD1O75127 700 aaKnown RBP16.06■□□□□ 0.16
DEPDC1B-206ENST00000512452 RABL6Q3YEC7 729 aaPredicted RBP16.06■□□□□ 0.16
DEPDC1B-206ENST00000512452 KAZALD1Q96I82 304 aa16.06■□□□□ 0.16
DEPDC1B-206ENST00000512452 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 POTECB2RU33 542 aa16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 EPB41L2O43491 1005 aaKnown RBP16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 MMP10P09238 476 aa16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 CCDC191Q8NCU4 936 aa16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 AK7Q96M32 723 aa16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 BICC1Q9H694 974 aaKnown RBP16.05■□□□□ 0.16
DEPDC1B-206ENST00000512452 SBF1O95248 1867 aa16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 REC8O95072 547 aa16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 CASP7P55210 303 aa16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 TRIM28Q13263 835 aaKnown RBP16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 CLASRPQ8N2M8 674 aaKnown RBP16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 SNX21Q969T3 373 aa16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 GPATCH3Q96I76 525 aa16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 CWC25Q9NXE8 425 aaPredicted RBP16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
DEPDC1B-206ENST00000512452 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
DEPDC1B-206ENST00000512452 H7C1W4 665 aa16.03■□□□□ 0.16
DEPDC1B-206ENST00000512452 A1BGP04217 495 aa16.03■□□□□ 0.16
DEPDC1B-206ENST00000512452 G3BP1Q13283 466 aaKnown RBP eCLIP16.03■□□□□ 0.16
DEPDC1B-206ENST00000512452 COPRSQ9NQ92 184 aa16.03■□□□□ 0.16
DEPDC1B-206ENST00000512452 PIM2Q9P1W9 311 aa16.03■□□□□ 0.16
DEPDC1B-206ENST00000512452 TMEM88BA6NKF7 163 aa16.02■□□□□ 0.16
DEPDC1B-206ENST00000512452 ERC2O15083 957 aa16.02■□□□□ 0.16
DEPDC1B-206ENST00000512452 KCNA3P22001 575 aa16.02■□□□□ 0.16
DEPDC1B-206ENST00000512452 DALRD3Q5D0E6 543 aaKnown RBP16.02■□□□□ 0.16
DEPDC1B-206ENST00000512452 TTLL7Q6ZT98 887 aa16.02■□□□□ 0.16
DEPDC1B-206ENST00000512452 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
DEPDC1B-206ENST00000512452 DOT1LQ8TEK3 1739 aa16.02■□□□□ 0.15
DEPDC1B-206ENST00000512452 A0A087WZG4 1122 aa16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 GLRX3O76003 335 aaKnown RBP16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 KIF6Q6ZMV9 814 aa16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 DNAJC10Q8IXB1 793 aa16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 BEGAINQ9BUH8 593 aa16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 IL1RAPL2Q9NP60 686 aa16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 BRCA1P38398 1863 aaKnown RBP16.01■□□□□ 0.15
DEPDC1B-206ENST00000512452 PIP4K2AP48426 406 aaPredicted RBP16■□□□□ 0.15
DEPDC1B-206ENST00000512452 TCIRG1Q13488 830 aa16■□□□□ 0.15
DEPDC1B-206ENST00000512452 DEFB115Q30KQ5 88 aa16■□□□□ 0.15
DEPDC1B-206ENST00000512452 HSP90AB3PQ58FF7 597 aa16■□□□□ 0.15
DEPDC1B-206ENST00000512452 PI4K2BQ8TCG2 481 aa16■□□□□ 0.15
DEPDC1B-206ENST00000512452 USP26Q9BXU7 913 aa16■□□□□ 0.15
DEPDC1B-206ENST00000512452 TBC1D2Q9BYX2 928 aa16■□□□□ 0.15
DEPDC1B-206ENST00000512452 TJP1Q07157 1748 aa15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 PASKQ96RG2 1323 aa15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 WDR33Q9C0J8 1336 aaKnown RBP15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 CYP19A1P11511 503 aaPredicted RBP15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 UBE3BQ7Z3V4 1068 aa15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 ECHDC1Q9NTX5 307 aa15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 CCDC87Q9NVE4 849 aa15.99■□□□□ 0.15
DEPDC1B-206ENST00000512452 MAP3K15Q6ZN16 1313 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 ATP5J2-PTCD1G3V325 749 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 IFIT2P09913 472 aaKnown RBP15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 SSFA2P28290 1259 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 RFX5P48382 616 aaPredicted RBP15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 SOX10P56693 466 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 DGKZQ13574 1117 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 RABEP1Q15276 862 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 HABP4Q5JVS0 413 aaKnown RBP15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 HSCBQ8IWL3 235 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 CNTROBQ8N137 903 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 SMARCC1Q92922 1105 aaPredicted RBP15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 RBM42Q9BTD8 480 aaKnown RBP15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 ZNF831Q5JPB2 1677 aa15.98■□□□□ 0.15
DEPDC1B-206ENST00000512452 TRIM6-TRIM34B2RNG4 842 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 ERVV-1B6SEH8 477 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 SASH1O94885 1247 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 CHMLP26374 656 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 IL6STP40189 918 aaPredicted RBP15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 EPHA10Q5JZY3 1008 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 DPY19L2Q6NUT2 758 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 NUTM1Q86Y26 1132 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 KIF2CQ99661 725 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 ESYT1Q9BSJ8 1104 aa15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 PA2G4Q9UQ80 394 aaKnown RBP15.97■□□□□ 0.15
DEPDC1B-206ENST00000512452 TAF1LQ8IZX4 1826 aa15.96■□□□□ 0.15
DEPDC1B-206ENST00000512452 RASSF10A6NK89 507 aa15.96■□□□□ 0.15
DEPDC1B-206ENST00000512452 POTEIP0CG38 1075 aa15.96■□□□□ 0.15
DEPDC1B-206ENST00000512452 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
DEPDC1B-206ENST00000512452 LMNB1P20700 586 aa15.96■□□□□ 0.15
DEPDC1B-206ENST00000512452 SLC4A3P48751 1232 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms