RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 UTP14AQ9BVJ6 771 aaKnown RBP12.72□□□□□ -0.37
SUB1-210ENST00000511988 C1orf115Q9H7X2 142 aa12.72□□□□□ -0.37
SUB1-210ENST00000511988 TRMT112Q9UI30 125 aaKnown RBP12.72□□□□□ -0.37
SUB1-210ENST00000511988 PCDHB15Q9Y5E8 787 aa12.72□□□□□ -0.37
SUB1-210ENST00000511988 HMMRO75330 724 aa12.71□□□□□ -0.37
SUB1-210ENST00000511988 NTSR2O95665 410 aa12.71□□□□□ -0.37
SUB1-210ENST00000511988 MLLT1Q03111 559 aaPredicted RBP12.71□□□□□ -0.37
SUB1-210ENST00000511988 MTX1Q13505 466 aa12.71□□□□□ -0.37
SUB1-210ENST00000511988 HDAC1Q13547 482 aaPredicted RBP12.71□□□□□ -0.37
SUB1-210ENST00000511988 CEP85Q6P2H3 762 aa12.71□□□□□ -0.37
SUB1-210ENST00000511988 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
SUB1-210ENST00000511988 SUCLG2Q96I99 432 aa12.71□□□□□ -0.37
SUB1-210ENST00000511988 NFIXQ14938 502 aa12.7□□□□□ -0.38
SUB1-210ENST00000511988 SUSD4Q5VX71 490 aa12.7□□□□□ -0.38
SUB1-210ENST00000511988 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
SUB1-210ENST00000511988 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
SUB1-210ENST00000511988 RABL6Q3YEC7 729 aaPredicted RBP12.69□□□□□ -0.38
SUB1-210ENST00000511988 BICDL1Q6ZP65 573 aa12.69□□□□□ -0.38
SUB1-210ENST00000511988 CENPQQ7L2Z9 268 aaPredicted RBP12.69□□□□□ -0.38
SUB1-210ENST00000511988 NBPF5PQ86XG9 351 aaPredicted RBP12.69□□□□□ -0.38
SUB1-210ENST00000511988 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
SUB1-210ENST00000511988 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
SUB1-210ENST00000511988 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
SUB1-210ENST00000511988 IRS4O14654 1257 aaPredicted RBP12.68□□□□□ -0.38
SUB1-210ENST00000511988 B4GALNT3Q6L9W6 998 aa12.68□□□□□ -0.38
SUB1-210ENST00000511988 TPTE2Q6XPS3 522 aa12.68□□□□□ -0.38
SUB1-210ENST00000511988 CNBD1Q8NA66 436 aa12.68□□□□□ -0.38
SUB1-210ENST00000511988 KAZALD1Q96I82 304 aa12.68□□□□□ -0.38
SUB1-210ENST00000511988 ABCC12Q96J65 1359 aa12.68□□□□□ -0.38
SUB1-210ENST00000511988 KDM2BQ8NHM5 1336 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 PDE8AO60658 829 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 TM4SF1P30408 202 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 CTSWP56202 376 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 ATP8B2P98198 1209 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 SIRT2Q8IXJ6 389 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 RTL9Q8NET4 1388 aa12.67□□□□□ -0.38
SUB1-210ENST00000511988 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 POLRMTO00411 1230 aaKnown RBP12.66□□□□□ -0.38
SUB1-210ENST00000511988 NPHP1O15259 732 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 SRGAP3O43295 1099 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 GTF2E1P29083 439 aaPredicted RBP12.66□□□□□ -0.38
SUB1-210ENST00000511988 ST5P78524 1137 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 FOXO4P98177 505 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 DDR1Q08345 913 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 POLA2Q14181 598 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 RTL5Q5HYW3 569 aaPredicted RBP12.66□□□□□ -0.38
SUB1-210ENST00000511988 SSH3Q8TE77 659 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
SUB1-210ENST00000511988 ABHD8Q96I13 439 aa12.66□□□□□ -0.38
SUB1-210ENST00000511988 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 PNMA6EA0A0J9YXQ4 647 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 FOXN1O15353 648 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 SERPINB2P05120 415 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 MMP10P09238 476 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 ERFEQ4G0M1 354 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 EPHA10Q5JZY3 1008 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 SLC10A5Q5PT55 438 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 NUTM1Q86Y26 1132 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 PARP3Q9Y6F1 533 aa12.65□□□□□ -0.38
SUB1-210ENST00000511988 IGHDP01880 384 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 CSF1RP07333 972 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 CCDC152Q4G0S7 254 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 PRR5LQ6MZQ0 368 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 SMC5Q8IY18 1101 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 PRDM10Q9NQV6 1147 aa12.64□□□□□ -0.39
SUB1-210ENST00000511988 SPEF2Q9C093 1822 aa12.63□□□□□ -0.39
SUB1-210ENST00000511988 HCLS1P14317 486 aaPredicted RBP12.63□□□□□ -0.39
SUB1-210ENST00000511988 HSP90AB4PQ58FF6 505 aa12.63□□□□□ -0.39
SUB1-210ENST00000511988 SYNE4Q8N205 404 aa12.63□□□□□ -0.39
SUB1-210ENST00000511988 TTLL11Q8NHH1 800 aa12.63□□□□□ -0.39
SUB1-210ENST00000511988 CHMP3Q9Y3E7 222 aa12.63□□□□□ -0.39
SUB1-210ENST00000511988 COL11A2P13942 1736 aaPredicted RBP12.62□□□□□ -0.39
SUB1-210ENST00000511988 KIF13BQ9NQT8 1826 aa12.62□□□□□ -0.39
SUB1-210ENST00000511988 IFIT5Q13325 482 aaKnown RBP12.62□□□□□ -0.39
SUB1-210ENST00000511988 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
SUB1-210ENST00000511988 CCDC57Q2TAC2 916 aa12.62□□□□□ -0.39
SUB1-210ENST00000511988 NLRP3Q96P20 1036 aa12.62□□□□□ -0.39
SUB1-210ENST00000511988 DCTPP1Q9H773 170 aa12.62□□□□□ -0.39
SUB1-210ENST00000511988 COPRSQ9NQ92 184 aa12.62□□□□□ -0.39
SUB1-210ENST00000511988 C10orf71Q711Q0 1435 aa12.62□□□□□ -0.39
SUB1-210ENST00000511988 DLEC1Q9Y238 1755 aa12.61□□□□□ -0.39
SUB1-210ENST00000511988 RFX5P48382 616 aaPredicted RBP12.61□□□□□ -0.39
SUB1-210ENST00000511988 ERC1Q8IUD2 1116 aa12.61□□□□□ -0.39
SUB1-210ENST00000511988 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
SUB1-210ENST00000511988 FBXO3Q9UK99 471 aa12.61□□□□□ -0.39
SUB1-210ENST00000511988 NOP58Q9Y2X3 529 aaKnown RBP12.61□□□□□ -0.39
SUB1-210ENST00000511988 A0A1B0GUL6 1792 aa12.61□□□□□ -0.39
SUB1-210ENST00000511988 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 RAB11FIP3O75154 756 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 ITGA6P23229 1130 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 TAF7LQ5H9L4 462 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 ARHGAP27Q6ZUM4 889 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 CDC5LQ99459 802 aaKnown RBP12.6□□□□□ -0.39
SUB1-210ENST00000511988 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 GREM2Q9H772 168 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 PDE4DIPQ5VU43 2346 aa12.6□□□□□ -0.39
SUB1-210ENST00000511988 CCDC85CA6NKD9 419 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms