RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 CASP7P55210 303 aa20.42■□□□□ 0.86
SIM1-204ENST00000511871 LRRC37AA6NMS7 1700 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 LMNB1P20700 586 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 GRAPQ13588 217 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 CC2D2BQ6DHV5 1058 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 SLC4A10Q6U841 1118 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 UBE3BQ7Z3V4 1068 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 GRAPLQ8TC17 118 aaPredicted RBP20.41■□□□□ 0.86
SIM1-204ENST00000511871 TAOK3Q9H2K8 898 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 RNF181Q9P0P0 153 aa20.41■□□□□ 0.86
SIM1-204ENST00000511871 ALDH1L1O75891 902 aa20.4■□□□□ 0.86
SIM1-204ENST00000511871 BBOX1O75936 387 aa20.4■□□□□ 0.86
SIM1-204ENST00000511871 SLC51AQ86UW1 340 aa20.4■□□□□ 0.86
SIM1-204ENST00000511871 ZNF784Q8NCA9 323 aaPredicted RBP20.4■□□□□ 0.86
SIM1-204ENST00000511871 RTKN2Q8IZC4 609 aa20.39■□□□□ 0.86
SIM1-204ENST00000511871 SPEF2Q9C093 1822 aa20.39■□□□□ 0.85
SIM1-204ENST00000511871 FKBP4Q02790 459 aaKnown RBP eCLIP20.38■□□□□ 0.85
SIM1-204ENST00000511871 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
SIM1-204ENST00000511871 SRCIN1Q9C0H9 1055 aa20.38■□□□□ 0.85
SIM1-204ENST00000511871 ATP6V0A2Q9Y487 856 aa20.38■□□□□ 0.85
SIM1-204ENST00000511871 CTSWP56202 376 aa20.38■□□□□ 0.85
SIM1-204ENST00000511871 CCDC152Q4G0S7 254 aa20.38■□□□□ 0.85
SIM1-204ENST00000511871 CELF1Q92879 486 aaKnown RBP20.38■□□□□ 0.85
SIM1-204ENST00000511871 NOB1Q9ULX3 412 aaKnown RBP20.38■□□□□ 0.85
SIM1-204ENST00000511871 GRIPAP1Q4V328 841 aa20.37■□□□□ 0.85
SIM1-204ENST00000511871 SP8Q8IXZ3 490 aa20.37■□□□□ 0.85
SIM1-204ENST00000511871 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
SIM1-204ENST00000511871 SEC31BQ9NQW1 1179 aa20.37■□□□□ 0.85
SIM1-204ENST00000511871 TMC4Q7Z404 712 aa20.36■□□□□ 0.85
SIM1-204ENST00000511871 PSMD1Q99460 953 aa20.36■□□□□ 0.85
SIM1-204ENST00000511871 GRM8O00222 908 aa20.35■□□□□ 0.85
SIM1-204ENST00000511871 CCDC85AQ96PX6 553 aaPredicted RBP20.35■□□□□ 0.85
SIM1-204ENST00000511871 RPS8P62241 208 aaKnown RBP20.35■□□□□ 0.85
SIM1-204ENST00000511871 RTL9Q8NET4 1388 aa20.34■□□□□ 0.85
SIM1-204ENST00000511871 KIF16BQ96L93 1317 aa20.34■□□□□ 0.85
SIM1-204ENST00000511871 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
SIM1-204ENST00000511871 API5Q9BZZ5 524 aaKnown RBP20.34■□□□□ 0.85
SIM1-204ENST00000511871 TMX4Q9H1E5 349 aaPredicted RBP20.34■□□□□ 0.85
SIM1-204ENST00000511871 C9orf78Q9NZ63 289 aaPredicted RBP20.34■□□□□ 0.85
SIM1-204ENST00000511871 LTBP1Q14766 1721 aa20.33■□□□□ 0.85
SIM1-204ENST00000511871 BCAR3O75815 825 aa20.33■□□□□ 0.84
SIM1-204ENST00000511871 CSF1RP07333 972 aa20.33■□□□□ 0.84
SIM1-204ENST00000511871 ZNF277Q9NRM2 450 aaPredicted RBP20.33■□□□□ 0.84
SIM1-204ENST00000511871 UTYO14607 1347 aa20.32■□□□□ 0.84
SIM1-204ENST00000511871 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
SIM1-204ENST00000511871 GREM2Q9H772 168 aa20.32■□□□□ 0.84
SIM1-204ENST00000511871 FOXO4P98177 505 aa20.31■□□□□ 0.84
SIM1-204ENST00000511871 MPNDQ8N594 471 aa20.31■□□□□ 0.84
SIM1-204ENST00000511871 DUOX1Q9NRD9 1551 aa20.31■□□□□ 0.84
SIM1-204ENST00000511871 IARSP41252 1262 aaKnown RBP20.31■□□□□ 0.84
SIM1-204ENST00000511871 ZNF526Q8TF50 670 aaPredicted RBP20.31■□□□□ 0.84
SIM1-204ENST00000511871 RTFDC1Q9BY42 306 aaPredicted RBP20.31■□□□□ 0.84
SIM1-204ENST00000511871 NBPF7P0C2Y1 421 aaPredicted RBP20.3■□□□□ 0.84
SIM1-204ENST00000511871 CCT4P50991 539 aaKnown RBP20.3■□□□□ 0.84
SIM1-204ENST00000511871 EPHA10Q5JZY3 1008 aa20.3■□□□□ 0.84
SIM1-204ENST00000511871 DPP8Q6V1X1 898 aaPredicted RBP20.3■□□□□ 0.84
SIM1-204ENST00000511871 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
SIM1-204ENST00000511871 CDC5LQ99459 802 aaKnown RBP20.3■□□□□ 0.84
SIM1-204ENST00000511871 COL4A5P29400 1685 aa20.29■□□□□ 0.84
SIM1-204ENST00000511871 FAM161AQ3B820 660 aa20.29■□□□□ 0.84
SIM1-204ENST00000511871 IPO8O15397 1037 aaKnown RBP20.28■□□□□ 0.84
SIM1-204ENST00000511871 SUPT20HQ8NEM7 779 aa20.28■□□□□ 0.84
SIM1-204ENST00000511871 SUCLG2Q96I99 432 aa20.28■□□□□ 0.84
SIM1-204ENST00000511871 USP44Q9H0E7 712 aa20.28■□□□□ 0.84
SIM1-204ENST00000511871 GPBP1L1Q9HC44 474 aaPredicted RBP20.28■□□□□ 0.84
SIM1-204ENST00000511871 ITGA6P23229 1130 aa20.27■□□□□ 0.84
SIM1-204ENST00000511871 KAZALD1Q96I82 304 aa20.27■□□□□ 0.84
SIM1-204ENST00000511871 A0A1B0GUL6 1792 aa20.27■□□□□ 0.84
SIM1-204ENST00000511871 GPSM2P81274 684 aa20.27■□□□□ 0.83
SIM1-204ENST00000511871 LMBR1LQ6UX01 489 aa20.27■□□□□ 0.83
SIM1-204ENST00000511871 FRAT1Q92837 279 aaPredicted RBP20.27■□□□□ 0.83
SIM1-204ENST00000511871 VPS33BQ9H267 617 aa20.27■□□□□ 0.83
SIM1-204ENST00000511871 TRIM27P14373 513 aa20.26■□□□□ 0.83
SIM1-204ENST00000511871 ATF7IPQ6VMQ6 1270 aa20.26■□□□□ 0.83
SIM1-204ENST00000511871 NSFL1CQ9UNZ2 370 aaKnown RBP20.26■□□□□ 0.83
SIM1-204ENST00000511871 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
SIM1-204ENST00000511871 KDM2BQ8NHM5 1336 aa20.26■□□□□ 0.83
SIM1-204ENST00000511871 GLTPD2A6NH11 291 aa20.25■□□□□ 0.83
SIM1-204ENST00000511871 INTS3Q68E01 1043 aaKnown RBP20.25■□□□□ 0.83
SIM1-204ENST00000511871 BSDC1Q9NW68 430 aaPredicted RBP20.25■□□□□ 0.83
SIM1-204ENST00000511871 WDR90Q96KV7 1748 aa20.25■□□□□ 0.83
SIM1-204ENST00000511871 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 AOC3Q16853 763 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 LARGE2Q8N3Y3 721 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 PODXL2Q9NZ53 605 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 FZD9O00144 591 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 IGHMBP2P38935 993 aaKnown RBP20.24■□□□□ 0.83
SIM1-204ENST00000511871 JDP2Q8WYK2 163 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 POLLQ9UGP5 575 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 CHMP3Q9Y3E7 222 aa20.24■□□□□ 0.83
SIM1-204ENST00000511871 KIAA2012Q0VF49 1180 aa20.23■□□□□ 0.83
SIM1-204ENST00000511871 IFIT5Q13325 482 aaKnown RBP20.23■□□□□ 0.83
SIM1-204ENST00000511871 RABL6Q3YEC7 729 aaPredicted RBP20.23■□□□□ 0.83
SIM1-204ENST00000511871 DPY19L2Q6NUT2 758 aa20.23■□□□□ 0.83
SIM1-204ENST00000511871 TBC1D16Q8TBP0 767 aa20.23■□□□□ 0.83
SIM1-204ENST00000511871 BICC1Q9H694 974 aaKnown RBP20.23■□□□□ 0.83
SIM1-204ENST00000511871 NMRK2Q9NPI5 230 aa20.23■□□□□ 0.83
SIM1-204ENST00000511871 MINPP1Q9UNW1 487 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms