RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 FKBP5Q13451 457 aaPredicted RBP17.03■□□□□ 0.32
RNF4-215ENST00000511843 CC2D2BQ6DHV5 1058 aa17.03■□□□□ 0.32
RNF4-215ENST00000511843 DPY19L2Q6NUT2 758 aa17.03■□□□□ 0.32
RNF4-215ENST00000511843 CELF1Q92879 486 aaKnown RBP17.03■□□□□ 0.32
RNF4-215ENST00000511843 CCDC85AQ96PX6 553 aaPredicted RBP17.03■□□□□ 0.32
RNF4-215ENST00000511843 PSMD1Q99460 953 aa17.03■□□□□ 0.32
RNF4-215ENST00000511843 SCN4AP35499 1836 aa17.03■□□□□ 0.32
RNF4-215ENST00000511843 CEP350Q5VT06 3117 aa17.02■□□□□ 0.32
RNF4-215ENST00000511843 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
RNF4-215ENST00000511843 VEGFAP15692 232 aaPredicted RBP17.02■□□□□ 0.32
RNF4-215ENST00000511843 SF3B3Q15393 1217 aaKnown RBP17.02■□□□□ 0.32
RNF4-215ENST00000511843 LTBP1Q14766 1721 aa17.01■□□□□ 0.31
RNF4-215ENST00000511843 NEURL1BA8MQ27 555 aa17.01■□□□□ 0.31
RNF4-215ENST00000511843 BBOX1O75936 387 aa17.01■□□□□ 0.31
RNF4-215ENST00000511843 SEC31BQ9NQW1 1179 aa17.01■□□□□ 0.31
RNF4-215ENST00000511843 F6X3S4 739 aa17■□□□□ 0.31
RNF4-215ENST00000511843 HSPA6P17066 643 aa17■□□□□ 0.31
RNF4-215ENST00000511843 NEXNQ0ZGT2 675 aa17■□□□□ 0.31
RNF4-215ENST00000511843 AOC3Q16853 763 aa17■□□□□ 0.31
RNF4-215ENST00000511843 SP8Q8IXZ3 490 aa17■□□□□ 0.31
RNF4-215ENST00000511843 LARGE2Q8N3Y3 721 aa17■□□□□ 0.31
RNF4-215ENST00000511843 RBM46Q8TBY0 533 aaKnown RBP17■□□□□ 0.31
RNF4-215ENST00000511843 CDCA7LQ96GN5 454 aa17■□□□□ 0.31
RNF4-215ENST00000511843 TMX4Q9H1E5 349 aaPredicted RBP17■□□□□ 0.31
RNF4-215ENST00000511843 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
RNF4-215ENST00000511843 DPP8Q6V1X1 898 aaPredicted RBP16.99■□□□□ 0.31
RNF4-215ENST00000511843 MIER1Q8N108 512 aa16.99■□□□□ 0.31
RNF4-215ENST00000511843 MPNDQ8N594 471 aa16.99■□□□□ 0.31
RNF4-215ENST00000511843 DNAAF4Q8WXU2 420 aa16.99■□□□□ 0.31
RNF4-215ENST00000511843 FZD9O00144 591 aa16.98■□□□□ 0.31
RNF4-215ENST00000511843 PDE8AO60658 829 aa16.98■□□□□ 0.31
RNF4-215ENST00000511843 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
RNF4-215ENST00000511843 JDP2Q8WYK2 163 aa16.98■□□□□ 0.31
RNF4-215ENST00000511843 CDHR2Q9BYE9 1310 aa16.97■□□□□ 0.31
RNF4-215ENST00000511843 POTEIP0CG38 1075 aa16.97■□□□□ 0.31
RNF4-215ENST00000511843 POTEJP0CG39 1038 aa16.97■□□□□ 0.31
RNF4-215ENST00000511843 GRIPAP1Q4V328 841 aa16.97■□□□□ 0.31
RNF4-215ENST00000511843 DIEXFQ68CQ4 756 aaKnown RBP16.97■□□□□ 0.31
RNF4-215ENST00000511843 GJA3Q9Y6H8 435 aa16.97■□□□□ 0.31
RNF4-215ENST00000511843 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
RNF4-215ENST00000511843 GPSM2P81274 684 aa16.96■□□□□ 0.31
RNF4-215ENST00000511843 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
RNF4-215ENST00000511843 GCKRQ14397 625 aa16.96■□□□□ 0.31
RNF4-215ENST00000511843 NIM1KQ8IY84 436 aa16.96■□□□□ 0.31
RNF4-215ENST00000511843 GPR101Q96P66 508 aaPredicted RBP16.96■□□□□ 0.31
RNF4-215ENST00000511843 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.31
RNF4-215ENST00000511843 E9PSI1 815 aa16.95■□□□□ 0.3
RNF4-215ENST00000511843 H7C1W4 665 aa16.95■□□□□ 0.3
RNF4-215ENST00000511843 CTSWP56202 376 aa16.95■□□□□ 0.3
RNF4-215ENST00000511843 HTRA3P83110 453 aa16.95■□□□□ 0.3
RNF4-215ENST00000511843 CCDC152Q4G0S7 254 aa16.95■□□□□ 0.3
RNF4-215ENST00000511843 SUPT20HQ8NEM7 779 aa16.95■□□□□ 0.3
RNF4-215ENST00000511843 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
RNF4-215ENST00000511843 NSFL1CQ9UNZ2 370 aaKnown RBP16.95■□□□□ 0.3
RNF4-215ENST00000511843 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
RNF4-215ENST00000511843 EIF6P56537 245 aaKnown RBP16.94■□□□□ 0.3
RNF4-215ENST00000511843 TMC4Q7Z404 712 aa16.94■□□□□ 0.3
RNF4-215ENST00000511843 SMC1BQ8NDV3 1235 aa16.94■□□□□ 0.3
RNF4-215ENST00000511843 LINS1Q8NG48 757 aa16.94■□□□□ 0.3
RNF4-215ENST00000511843 BCL2L13Q9BXK5 485 aa16.94■□□□□ 0.3
RNF4-215ENST00000511843 GREM2Q9H772 168 aa16.94■□□□□ 0.3
RNF4-215ENST00000511843 SCN9AQ15858 1988 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 ADAMTSL1Q8N6G6 1762 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 CASP7P55210 303 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 FSTL1Q12841 308 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 BEND3Q5T5X7 828 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 GPC2Q8N158 579 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 TTLL11Q8NHH1 800 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 TAF1DQ9H5J8 278 aaPredicted RBP16.93■□□□□ 0.3
RNF4-215ENST00000511843 POLLQ9UGP5 575 aa16.93■□□□□ 0.3
RNF4-215ENST00000511843 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
RNF4-215ENST00000511843 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
RNF4-215ENST00000511843 RIMBP2O15034 1052 aa16.92■□□□□ 0.3
RNF4-215ENST00000511843 SLC4A10Q6U841 1118 aa16.92■□□□□ 0.3
RNF4-215ENST00000511843 IQCA1LA6NCM1 817 aa16.91■□□□□ 0.3
RNF4-215ENST00000511843 CXCL9Q07325 125 aa16.91■□□□□ 0.3
RNF4-215ENST00000511843 EAPPQ56P03 285 aaPredicted RBP16.91■□□□□ 0.3
RNF4-215ENST00000511843 ANKRD18AQ8IVF6 992 aa16.91■□□□□ 0.3
RNF4-215ENST00000511843 MRPL50Q8N5N7 158 aaKnown RBP16.91■□□□□ 0.3
RNF4-215ENST00000511843 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
RNF4-215ENST00000511843 HACL1Q9UJ83 578 aa16.91■□□□□ 0.3
RNF4-215ENST00000511843 ZNRF3Q9ULT6 936 aa16.91■□□□□ 0.3
RNF4-215ENST00000511843 YDJCA8MPS7 323 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 RAD17O75943 681 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 EPHX2P34913 555 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 SCNN1DP51172 638 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 APLP1P51693 650 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 WASHC4Q2M389 1173 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 FAM161AQ3B820 660 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
RNF4-215ENST00000511843 PSME4Q14997 1843 aa16.89■□□□□ 0.29
RNF4-215ENST00000511843 WTIPA6NIX2 430 aaPredicted RBP16.89■□□□□ 0.29
RNF4-215ENST00000511843 UFL1O94874 794 aa16.89■□□□□ 0.29
RNF4-215ENST00000511843 EPS15P42566 896 aa16.89■□□□□ 0.29
RNF4-215ENST00000511843 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
RNF4-215ENST00000511843 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.29
RNF4-215ENST00000511843 VPS33BQ9H267 617 aa16.89■□□□□ 0.29
RNF4-215ENST00000511843 ANKIB1Q9P2G1 1089 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms