RNA–Protein interactions for RNA: ENST00000511615.5

SUB1-209, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-209ENST00000511615 ZKSCAN1P17029 563 aaPredicted RBP11.34□□□□□ -0.59
SUB1-209ENST00000511615 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
SUB1-209ENST00000511615 UPF3BQ9BZI7 483 aaKnown RBP11.34□□□□□ -0.59
SUB1-209ENST00000511615 LIMCH1Q9UPQ0 1083 aa11.34□□□□□ -0.59
SUB1-209ENST00000511615 PALLDQ8WX93 1383 aa11.34□□□□□ -0.59
SUB1-209ENST00000511615 SASH1O94885 1247 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 PDIA4P13667 645 aaKnown RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 PSMA5P28066 241 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 IL6STP40189 918 aaPredicted RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 PTF1AQ7RTS3 328 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 KCNB2Q92953 911 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 COPRSQ9NQ92 184 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 KCNJ4P48050 445 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 PKP1Q13835 747 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 RC3H1Q5TC82 1133 aaKnown RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 VPS53Q5VIR6 699 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 RNF20Q5VTR2 975 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 INTS5Q6P9B9 1019 aaKnown RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 POTEAQ6S8J7 498 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 NOL8Q76FK4 1167 aaKnown RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 SYAP1Q96A49 352 aaPredicted RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 EAF2Q96CJ1 260 aaPredicted RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 TRIM44Q96DX7 344 aaPredicted RBP11.33□□□□□ -0.6
SUB1-209ENST00000511615 CYP46A1Q9Y6A2 500 aa11.33□□□□□ -0.6
SUB1-209ENST00000511615 RGL2O15211 777 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
SUB1-209ENST00000511615 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 EIF5P55010 431 aaKnown RBP11.32□□□□□ -0.6
SUB1-209ENST00000511615 CCDC173Q0VFZ6 552 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 ITPK1Q13572 414 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 CAVIN1Q6NZI2 390 aaKnown RBP11.32□□□□□ -0.6
SUB1-209ENST00000511615 TTC14Q96N46 770 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 CCDC8Q9H0W5 538 aaPredicted RBP11.32□□□□□ -0.6
SUB1-209ENST00000511615 IL25Q9H293 177 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 SH2B1Q9NRF2 756 aaPredicted RBP11.32□□□□□ -0.6
SUB1-209ENST00000511615 SNRKQ9NRH2 765 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 PDRG1Q9NUG6 133 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 ATP6V1DQ9Y5K8 247 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 ZNF831Q5JPB2 1677 aa11.32□□□□□ -0.6
SUB1-209ENST00000511615 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 CICQ96RK0 1608 aaPredicted RBP11.31□□□□□ -0.6
SUB1-209ENST00000511615 AK2P54819 239 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
SUB1-209ENST00000511615 FAM182BQ5T319 152 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 GAS2L3Q86XJ1 694 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 FSD1Q9BTV5 496 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 PANK2Q9BZ23 570 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 SMC3Q9UQE7 1217 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 C5P01031 1676 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 CCDC171Q6TFL3 1326 aa11.31□□□□□ -0.6
SUB1-209ENST00000511615 ERVV-1B6SEH8 477 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
SUB1-209ENST00000511615 NASPP49321 788 aaPredicted RBP11.3□□□□□ -0.6
SUB1-209ENST00000511615 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 CSPP1Q1MSJ5 1256 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 ZSCAN23Q3MJ62 389 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 PRPF40BQ6NWY9 871 aaKnown RBP11.3□□□□□ -0.6
SUB1-209ENST00000511615 TICAM2Q86XR7 235 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 SIL1Q9H173 461 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 ZSWIM6Q9HCJ5 1215 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 RFX7Q2KHR2 1363 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 A0A087WZG4 1122 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 PLSCR1O15162 318 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 PHF14O94880 888 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 ATP5JP18859 108 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 NMIQ13287 307 aaPredicted RBP11.3□□□□□ -0.6
SUB1-209ENST00000511615 TTLL7Q6ZT98 887 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 JAKMIP1Q96N16 626 aaKnown RBP11.3□□□□□ -0.6
SUB1-209ENST00000511615 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 HMG20BQ9P0W2 317 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 KAT6BQ8WYB5 2073 aa11.3□□□□□ -0.6
SUB1-209ENST00000511615 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 CRKLP46109 303 aaKnown RBP11.29□□□□□ -0.6
SUB1-209ENST00000511615 RFX5P48382 616 aaPredicted RBP11.29□□□□□ -0.6
SUB1-209ENST00000511615 NECTIN1Q15223 517 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 FOXD4L5Q5VV16 416 aaPredicted RBP11.29□□□□□ -0.6
SUB1-209ENST00000511615 CREB3L3Q68CJ9 461 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 FOXD4L4Q8WXT5 416 aaPredicted RBP11.29□□□□□ -0.6
SUB1-209ENST00000511615 MAP4K1Q92918 833 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 ZBTB1Q9Y2K1 713 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 RBM8AQ9Y5S9 174 aaKnown RBP11.29□□□□□ -0.6
SUB1-209ENST00000511615 CNTNAP4Q9C0A0 1308 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 NHSQ6T4R5 1651 aa11.29□□□□□ -0.6
SUB1-209ENST00000511615 PIP4K2AP48426 406 aaPredicted RBP11.28□□□□□ -0.6
SUB1-209ENST00000511615 PTH1RQ03431 593 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 TCIRG1Q13488 830 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 KRT32Q14532 448 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 TNNI3KQ59H18 835 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 EPHA10Q5JZY3 1008 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 SLC27A3Q5K4L6 730 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 UBE3BQ7Z3V4 1068 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 KLHL34Q8N239 644 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 GPT2Q8TD30 523 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 PPP1R9BQ96SB3 815 aa11.28□□□□□ -0.6
SUB1-209ENST00000511615 ISCA1Q9BUE6 129 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms