RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SLC51AQ86UW1 340 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 GRAPLQ8TC17 118 aaPredicted RBP10.87□□□□□ -0.67
TRIO-217ENST00000511019 BCL2L13Q9BXK5 485 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 ADARB2Q9NS39 739 aaKnown RBP10.87□□□□□ -0.67
TRIO-217ENST00000511019 GPRC5DQ9NZD1 345 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 LAMB4A4D0S4 1761 aa10.87□□□□□ -0.67
TRIO-217ENST00000511019 MYBBP1AQ9BQG0 1328 aaKnown RBP10.86□□□□□ -0.67
TRIO-217ENST00000511019 NUP98P52948 1817 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 ECE1P42892 770 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 FMR1Q06787 632 aaKnown RBP eCLIP10.86□□□□□ -0.67
TRIO-217ENST00000511019 HDGFL1Q5TGJ6 251 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 CIAPIN1Q6FI81 312 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 PAXIP1Q6ZW49 1069 aaPredicted RBP10.86□□□□□ -0.67
TRIO-217ENST00000511019 TMC4Q7Z404 712 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 PLBD2Q8NHP8 589 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 CHPF2Q9P2E5 772 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 DBF4Q9UBU7 674 aaPredicted RBP10.86□□□□□ -0.67
TRIO-217ENST00000511019 TRIM35Q9UPQ4 493 aa10.86□□□□□ -0.67
TRIO-217ENST00000511019 TRAF5O00463 557 aa10.85□□□□□ -0.67
TRIO-217ENST00000511019 GMPSP49915 693 aaPredicted RBP10.85□□□□□ -0.67
TRIO-217ENST00000511019 LBX1P52954 281 aa10.85□□□□□ -0.67
TRIO-217ENST00000511019 KIAA2012Q0VF49 1180 aa10.85□□□□□ -0.67
TRIO-217ENST00000511019 CST9Q5W186 159 aa10.85□□□□□ -0.67
TRIO-217ENST00000511019 ADAMTS8Q9UP79 889 aa10.85□□□□□ -0.67
TRIO-217ENST00000511019 ATP5J2-PTCD1G3V325 749 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 H7C1D1 291 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 RAD17O75943 681 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 HOXB7P09629 217 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 GRM1Q13255 1194 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 ZNF428Q96B54 188 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 FAM89AQ96GI7 184 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 CAPNS2Q96L46 248 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 CFAP44Q96MT7 982 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 GPR101Q96P66 508 aaPredicted RBP10.84□□□□□ -0.67
TRIO-217ENST00000511019 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 HYPKQ9NX55 129 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 PGAP2Q9UHJ9 254 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 CNOT7Q9UIV1 285 aaKnown RBP10.84□□□□□ -0.67
TRIO-217ENST00000511019 NSFL1CQ9UNZ2 370 aaKnown RBP10.84□□□□□ -0.67
TRIO-217ENST00000511019 COL4A5P29400 1685 aa10.84□□□□□ -0.67
TRIO-217ENST00000511019 SF3B3Q15393 1217 aaKnown RBP10.83□□□□□ -0.68
TRIO-217ENST00000511019 WASHC4Q2M389 1173 aa10.83□□□□□ -0.68
TRIO-217ENST00000511019 DUSP27Q5VZP5 1158 aa10.83□□□□□ -0.68
TRIO-217ENST00000511019 CDC37L1Q7L3B6 337 aa10.83□□□□□ -0.68
TRIO-217ENST00000511019 ZC3H15Q8WU90 426 aaKnown RBP10.83□□□□□ -0.68
TRIO-217ENST00000511019 ISCA1Q9BUE6 129 aa10.83□□□□□ -0.68
TRIO-217ENST00000511019 TLL2Q9Y6L7 1015 aa10.83□□□□□ -0.68
TRIO-217ENST00000511019 C6orf229H3BNL8 230 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 RIMBP2O15034 1052 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 HSPA8P11142 646 aaKnown RBP10.82□□□□□ -0.68
TRIO-217ENST00000511019 MAP2K2P36507 400 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 TRIM28Q13263 835 aaKnown RBP10.82□□□□□ -0.68
TRIO-217ENST00000511019 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
TRIO-217ENST00000511019 CYP4F22Q6NT55 531 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 CELF1Q92879 486 aaKnown RBP10.82□□□□□ -0.68
TRIO-217ENST00000511019 ADAMTSL1Q8N6G6 1762 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 CDHR2Q9BYE9 1310 aa10.82□□□□□ -0.68
TRIO-217ENST00000511019 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 CELF2O95319 508 aaKnown RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 HSP90B1P14625 803 aaKnown RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 HIRAP54198 1017 aaPredicted RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 RPS8P62241 208 aaKnown RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 DPF2Q92785 391 aa10.81□□□□□ -0.68
TRIO-217ENST00000511019 EYA3Q99504 573 aa10.81□□□□□ -0.68
TRIO-217ENST00000511019 GLIS2Q9BZE0 524 aaPredicted RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 ZBTB12Q9Y330 459 aaPredicted RBP10.81□□□□□ -0.68
TRIO-217ENST00000511019 YDJCA8MPS7 323 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 G3V3G9 751 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 ELL2O00472 640 aaPredicted RBP10.8□□□□□ -0.68
TRIO-217ENST00000511019 GPSM2P81274 684 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 CALD1Q05682 793 aaKnown RBP10.8□□□□□ -0.68
TRIO-217ENST00000511019 GOLGA2Q08379 1002 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 DCAF8Q5TAQ9 597 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 SAPCD2Q86UD0 394 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 USP48Q86UV5 1035 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 CHMP4AQ9BY43 222 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 ZC3H12CQ9C0D7 883 aaKnown RBP10.8□□□□□ -0.68
TRIO-217ENST00000511019 ZNF408Q9H9D4 720 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 MBIPQ9NS73 344 aa10.8□□□□□ -0.68
TRIO-217ENST00000511019 LTBP1Q14766 1721 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 APAF1O14727 1248 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 ZNF853P0CG23 659 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 GNAI1P63096 354 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 DOK7Q18PE1 504 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 MICALL2Q8IY33 904 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 ZBTB38Q8NAP3 1195 aaPredicted RBP10.79□□□□□ -0.68
TRIO-217ENST00000511019 HHIPL1Q96JK4 782 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 PHAXQ9H814 394 aaKnown RBP10.79□□□□□ -0.68
TRIO-217ENST00000511019 DBNDD1Q9H9R9 158 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 POLLQ9UGP5 575 aa10.79□□□□□ -0.68
TRIO-217ENST00000511019 PSMD14O00487 310 aa10.78□□□□□ -0.68
TRIO-217ENST00000511019 AOC2O75106 756 aa10.78□□□□□ -0.68
TRIO-217ENST00000511019 RPS12P25398 132 aaKnown RBP10.78□□□□□ -0.68
TRIO-217ENST00000511019 RBM26Q5T8P6 1007 aaKnown RBP10.78□□□□□ -0.68
TRIO-217ENST00000511019 SAMD7Q7Z3H4 446 aa10.78□□□□□ -0.68
TRIO-217ENST00000511019 TBC1D16Q8TBP0 767 aa10.78□□□□□ -0.68
TRIO-217ENST00000511019 TRPM4Q8TD43 1214 aa10.78□□□□□ -0.68
TRIO-217ENST00000511019 MYD88Q99836 296 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms