RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 A0A087WZG4 1122 aa16.96■□□□□ 0.31
AP003555.1-202ENST00000511013 TFCP2Q12800 502 aa16.96■□□□□ 0.31
AP003555.1-202ENST00000511013 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
AP003555.1-202ENST00000511013 PARP4Q9UKK3 1724 aaKnown RBP16.95■□□□□ 0.3
AP003555.1-202ENST00000511013 FIBPO43427 364 aa16.95■□□□□ 0.3
AP003555.1-202ENST00000511013 TAF5LO75529 589 aa16.95■□□□□ 0.3
AP003555.1-202ENST00000511013 DBNLQ9UJU6 430 aaKnown RBP16.95■□□□□ 0.3
AP003555.1-202ENST00000511013 U3KPZ7 1027 aaPredicted RBP16.95■□□□□ 0.3
AP003555.1-202ENST00000511013 VPS37CA5D8V6 355 aaPredicted RBP16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 TERF1P54274 439 aa16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 DNM1Q05193 864 aaKnown RBP16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 ST3GAL1Q11201 340 aa16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 CHRNA2Q15822 529 aa16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 HAUS7Q99871 368 aa16.94■□□□□ 0.3
AP003555.1-202ENST00000511013 H7C1W4 665 aa16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 PTMAP06454 111 aaKnown RBP16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 CASP7P55210 303 aa16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 KRT85P78386 507 aa16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 CABLES1Q8TDN4 633 aa16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 GPR108Q9NPR9 543 aa16.93■□□□□ 0.3
AP003555.1-202ENST00000511013 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 DDX17Q92841 729 aaKnown RBP16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 ATP5J2-PTCD1G3V325 749 aa16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 PTCD1O75127 700 aaKnown RBP16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.92■□□□□ 0.3
AP003555.1-202ENST00000511013 ELP1O95163 1332 aa16.91■□□□□ 0.3
AP003555.1-202ENST00000511013 ERVV-2B6SEH9 535 aa16.91■□□□□ 0.3
AP003555.1-202ENST00000511013 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
AP003555.1-202ENST00000511013 LMBR1LQ6UX01 489 aa16.91■□□□□ 0.3
AP003555.1-202ENST00000511013 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
AP003555.1-202ENST00000511013 DBNDD2Q9BQY9 259 aa16.91■□□□□ 0.3
AP003555.1-202ENST00000511013 PIP4K2AP48426 406 aaPredicted RBP16.9■□□□□ 0.3
AP003555.1-202ENST00000511013 CWC25Q9NXE8 425 aaPredicted RBP16.9■□□□□ 0.3
AP003555.1-202ENST00000511013 PCDH11XQ9BZA7 1347 aa16.9■□□□□ 0.3
AP003555.1-202ENST00000511013 PCDH11YQ9BZA8 1340 aa16.9■□□□□ 0.3
AP003555.1-202ENST00000511013 FOXO4P98177 505 aa16.89■□□□□ 0.3
AP003555.1-202ENST00000511013 KBTBD3Q8NAB2 608 aa16.89■□□□□ 0.3
AP003555.1-202ENST00000511013 ZCRB1Q8TBF4 217 aaKnown RBP16.89■□□□□ 0.3
AP003555.1-202ENST00000511013 EDC3Q96F86 508 aaKnown RBP16.89■□□□□ 0.3
AP003555.1-202ENST00000511013 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.3
AP003555.1-202ENST00000511013 SCAND2PQ9GZW5 306 aaPredicted RBP16.89■□□□□ 0.3
AP003555.1-202ENST00000511013 STRCP1A6NGW2 1772 aa16.89■□□□□ 0.29
AP003555.1-202ENST00000511013 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
AP003555.1-202ENST00000511013 HELLSQ9NRZ9 838 aa16.89■□□□□ 0.29
AP003555.1-202ENST00000511013 SH3TC1Q8TE82 1336 aa16.89■□□□□ 0.29
AP003555.1-202ENST00000511013 ZNF609O15014 1411 aa16.88■□□□□ 0.29
AP003555.1-202ENST00000511013 GLI3P10071 1580 aa16.88■□□□□ 0.29
AP003555.1-202ENST00000511013 IL15P40933 162 aaPredicted RBP16.88■□□□□ 0.29
AP003555.1-202ENST00000511013 CCDC191Q8NCU4 936 aa16.88■□□□□ 0.29
AP003555.1-202ENST00000511013 CHMP3Q9Y3E7 222 aa16.88■□□□□ 0.29
AP003555.1-202ENST00000511013 PALLDQ8WX93 1383 aa16.88■□□□□ 0.29
AP003555.1-202ENST00000511013 NBPF26B4DH59 902 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 NBPF10Q6P3W6 841 aaKnown RBP16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 CDC37L1Q7L3B6 337 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 NBPF15Q8N660 670 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 FUCA2Q9BTY2 467 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 WDR17Q8IZU2 1322 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 GTF3C6Q969F1 213 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 TAF6LQ9Y6J9 622 aa16.87■□□□□ 0.29
AP003555.1-202ENST00000511013 NUP188Q5SRE5 1749 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 GOLGA6L4A6NEF3 574 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 KDM4AO75164 1064 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 CCDC192P0DO97 292 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 ATG9AQ7Z3C6 839 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 TTC6Q86TZ1 520 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 CHMP4CQ96CF2 233 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 NEUROD6Q96NK8 337 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 DSCC1Q9BVC3 393 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 PAG1Q9NWQ8 432 aa16.86■□□□□ 0.29
AP003555.1-202ENST00000511013 CIAO1O76071 339 aa16.85■□□□□ 0.29
AP003555.1-202ENST00000511013 ADCY5O95622 1261 aa16.85■□□□□ 0.29
AP003555.1-202ENST00000511013 GIMAP6Q6P9H5 292 aa16.85■□□□□ 0.29
AP003555.1-202ENST00000511013 Q6ZUG5 572 aa16.85■□□□□ 0.29
AP003555.1-202ENST00000511013 DDX46Q7L014 1031 aaKnown RBP16.85■□□□□ 0.29
AP003555.1-202ENST00000511013 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
AP003555.1-202ENST00000511013 EYA2O00167 538 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 CYP21A2P08686 494 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 KIAA2012Q0VF49 1180 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 STK3Q13188 491 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 TOM1L2Q6ZVM7 507 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 FERMT3Q86UX7 667 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 SPATA32Q96LK8 384 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 USP25Q9UHP3 1055 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 RRP9O43818 475 aaKnown RBP16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
AP003555.1-202ENST00000511013 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms