RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 BCS1LQ9Y276 419 aa13.11□□□□□ -0.31
NR1I3-227ENST00000510951 A0A1B0GUL6 1792 aa13.11□□□□□ -0.31
NR1I3-227ENST00000510951 LRRC37AA6NMS7 1700 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 CCDC88AQ3V6T2 1871 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 GOLGB1Q14789 3259 aaKnown RBP13.1□□□□□ -0.31
NR1I3-227ENST00000510951 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
NR1I3-227ENST00000510951 UBTFL1P0CB47 393 aaPredicted RBP13.1□□□□□ -0.31
NR1I3-227ENST00000510951 HSP90B1P14625 803 aaKnown RBP13.1□□□□□ -0.31
NR1I3-227ENST00000510951 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 STYK1Q6J9G0 422 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
NR1I3-227ENST00000510951 PDZRN3Q9UPQ7 1066 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 CHMP3Q9Y3E7 222 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 UTYO14607 1347 aa13.1□□□□□ -0.31
NR1I3-227ENST00000510951 YBX3P16989 372 aaKnown RBP eCLIP13.09□□□□□ -0.31
NR1I3-227ENST00000510951 FER1L6Q2WGJ9 1857 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 FAM161AQ3B820 660 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 CCDC152Q4G0S7 254 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 DALRD3Q5D0E6 543 aaKnown RBP13.09□□□□□ -0.31
NR1I3-227ENST00000510951 PRPF40BQ6NWY9 871 aaKnown RBP13.09□□□□□ -0.31
NR1I3-227ENST00000510951 SLC51AQ86UW1 340 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 TTLL6Q8N841 843 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
NR1I3-227ENST00000510951 PLA2G12BQ9BX93 195 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 COG6Q9Y2V7 657 aa13.09□□□□□ -0.31
NR1I3-227ENST00000510951 MS4A1P11836 297 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 FOXO4P98177 505 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
NR1I3-227ENST00000510951 GPR162Q16538 588 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
NR1I3-227ENST00000510951 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 CNKSR1Q969H4 720 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 BICC1Q9H694 974 aaKnown RBP13.08□□□□□ -0.32
NR1I3-227ENST00000510951 GREM2Q9H772 168 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 SEC31BQ9NQW1 1179 aa13.08□□□□□ -0.32
NR1I3-227ENST00000510951 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
NR1I3-227ENST00000510951 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
NR1I3-227ENST00000510951 GNAI3P08754 354 aa13.07□□□□□ -0.32
NR1I3-227ENST00000510951 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
NR1I3-227ENST00000510951 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
NR1I3-227ENST00000510951 LMBR1LQ6UX01 489 aa13.07□□□□□ -0.32
NR1I3-227ENST00000510951 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
NR1I3-227ENST00000510951 SUPT16HQ9Y5B9 1047 aaKnown RBP13.07□□□□□ -0.32
NR1I3-227ENST00000510951 SBF1O95248 1867 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 CHD4Q14839 1912 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 C21orf2O43822 256 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 ALDH1B1P30837 517 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 GRAPQ13588 217 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 PDE3AQ14432 1141 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 OLFM4Q6UX06 510 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 ANKRD44Q8N8A2 993 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
NR1I3-227ENST00000510951 CELF1Q92879 486 aaKnown RBP13.06□□□□□ -0.32
NR1I3-227ENST00000510951 CRAMP1Q96RY5 1269 aa13.06□□□□□ -0.32
NR1I3-227ENST00000510951 ITGA6P23229 1130 aa13.05□□□□□ -0.32
NR1I3-227ENST00000510951 RTL9Q8NET4 1388 aa13.05□□□□□ -0.32
NR1I3-227ENST00000510951 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
NR1I3-227ENST00000510951 CSF1RP07333 972 aa13.04□□□□□ -0.32
NR1I3-227ENST00000510951 IFIT5Q13325 482 aaKnown RBP13.04□□□□□ -0.32
NR1I3-227ENST00000510951 ANKRD18AQ8IVF6 992 aa13.04□□□□□ -0.32
NR1I3-227ENST00000510951 DDX19BQ9UMR2 479 aa13.04□□□□□ -0.32
NR1I3-227ENST00000510951 TIAM2Q8IVF5 1701 aa13.04□□□□□ -0.32
NR1I3-227ENST00000510951 ANKRD18BA2A2Z9 1011 aa13.03□□□□□ -0.32
NR1I3-227ENST00000510951 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
NR1I3-227ENST00000510951 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
NR1I3-227ENST00000510951 GNAI2P04899 355 aa13.03□□□□□ -0.32
NR1I3-227ENST00000510951 CCDC57Q2TAC2 916 aa13.03□□□□□ -0.32
NR1I3-227ENST00000510951 RABL6Q3YEC7 729 aaPredicted RBP13.03□□□□□ -0.32
NR1I3-227ENST00000510951 TAF7LQ5H9L4 462 aa13.03□□□□□ -0.32
NR1I3-227ENST00000510951 ZNF594Q96JF6 807 aaPredicted RBP13.03□□□□□ -0.32
NR1I3-227ENST00000510951 CDC5LQ99459 802 aaKnown RBP13.03□□□□□ -0.32
NR1I3-227ENST00000510951 DICER1Q9UPY3 1922 aaKnown RBP13.03□□□□□ -0.32
NR1I3-227ENST00000510951 DUOX1Q9NRD9 1551 aa13.03□□□□□ -0.32
NR1I3-227ENST00000510951 RPS8P62241 208 aaKnown RBP13.02□□□□□ -0.33
NR1I3-227ENST00000510951 RASSF7Q02833 373 aa13.02□□□□□ -0.33
NR1I3-227ENST00000510951 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
NR1I3-227ENST00000510951 CCDC93Q567U6 631 aa13.02□□□□□ -0.33
NR1I3-227ENST00000510951 CRBNQ96SW2 442 aa13.02□□□□□ -0.33
NR1I3-227ENST00000510951 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.33
NR1I3-227ENST00000510951 BBOX1O75936 387 aa13.01□□□□□ -0.33
NR1I3-227ENST00000510951 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
NR1I3-227ENST00000510951 IRX6P78412 446 aaPredicted RBP13.01□□□□□ -0.33
NR1I3-227ENST00000510951 ARHGAP27Q6ZUM4 889 aa13.01□□□□□ -0.33
NR1I3-227ENST00000510951 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
NR1I3-227ENST00000510951 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
NR1I3-227ENST00000510951 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
NR1I3-227ENST00000510951 SNED1Q8TER0 1413 aa13.01□□□□□ -0.33
NR1I3-227ENST00000510951 CENPBP07199 599 aaPredicted RBP13□□□□□ -0.33
NR1I3-227ENST00000510951 MPHOSPH8Q99549 860 aa13□□□□□ -0.33
NR1I3-227ENST00000510951 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
NR1I3-227ENST00000510951 PNMA6EA0A0J9YXQ4 647 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 NFKBIEO00221 500 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 SRGAP3O43295 1099 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 GRIN3BO60391 1043 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 SOGA3Q5TF21 947 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 SP8Q8IXZ3 490 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 SIL1Q9H173 461 aa12.99□□□□□ -0.33
NR1I3-227ENST00000510951 ZBTB40Q9NUA8 1239 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms