RNA–Protein interactions for RNA: ENST00000510405.5

SPOCK1-208, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5

Gene SPOCK1, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-208ENST00000510405 CCDC152Q4G0S7 254 aa21.91■■□□□ 1.1
SPOCK1-208ENST00000510405 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
SPOCK1-208ENST00000510405 IARSP41252 1262 aaKnown RBP21.9■■□□□ 1.1
SPOCK1-208ENST00000510405 MIER1Q8N108 512 aa21.9■■□□□ 1.1
SPOCK1-208ENST00000510405 KIF3CO14782 793 aa21.89■■□□□ 1.09
SPOCK1-208ENST00000510405 C16orf71Q8IYS4 520 aaPredicted RBP21.89■■□□□ 1.09
SPOCK1-208ENST00000510405 JDP2Q8WYK2 163 aa21.89■■□□□ 1.09
SPOCK1-208ENST00000510405 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
SPOCK1-208ENST00000510405 ZNF277Q9NRM2 450 aaPredicted RBP21.88■■□□□ 1.09
SPOCK1-208ENST00000510405 LRRC37AA6NMS7 1700 aa21.88■■□□□ 1.09
SPOCK1-208ENST00000510405 TOMM70O94826 608 aa21.87■■□□□ 1.09
SPOCK1-208ENST00000510405 GCKRQ14397 625 aa21.87■■□□□ 1.09
SPOCK1-208ENST00000510405 OLFM4Q6UX06 510 aa21.87■■□□□ 1.09
SPOCK1-208ENST00000510405 TRMT2AQ8IZ69 625 aaKnown RBP21.87■■□□□ 1.09
SPOCK1-208ENST00000510405 RTFDC1Q9BY42 306 aaPredicted RBP21.87■■□□□ 1.09
SPOCK1-208ENST00000510405 NMRK2Q9NPI5 230 aa21.87■■□□□ 1.09
SPOCK1-208ENST00000510405 WDR90Q96KV7 1748 aa21.86■■□□□ 1.09
SPOCK1-208ENST00000510405 VEGFAP15692 232 aaPredicted RBP21.86■■□□□ 1.09
SPOCK1-208ENST00000510405 CWF19L2Q2TBE0 894 aaKnown RBP21.86■■□□□ 1.09
SPOCK1-208ENST00000510405 ALDH1L2Q3SY69 923 aa21.86■■□□□ 1.09
SPOCK1-208ENST00000510405 DPP8Q6V1X1 898 aaPredicted RBP21.86■■□□□ 1.09
SPOCK1-208ENST00000510405 MPNDQ8N594 471 aa21.86■■□□□ 1.09
SPOCK1-208ENST00000510405 PTPRCP08575 1304 aa21.85■■□□□ 1.09
SPOCK1-208ENST00000510405 MYH3P11055 1940 aa21.85■■□□□ 1.09
SPOCK1-208ENST00000510405 H7C1W4 665 aa21.85■■□□□ 1.09
SPOCK1-208ENST00000510405 CTSWP56202 376 aa21.85■■□□□ 1.09
SPOCK1-208ENST00000510405 RTL9Q8NET4 1388 aa21.85■■□□□ 1.09
SPOCK1-208ENST00000510405 RPS8P62241 208 aaKnown RBP21.84■■□□□ 1.09
SPOCK1-208ENST00000510405 CDC5LQ99459 802 aaKnown RBP21.84■■□□□ 1.09
SPOCK1-208ENST00000510405 PLA2G12BQ9BX93 195 aa21.84■■□□□ 1.09
SPOCK1-208ENST00000510405 FZD9O00144 591 aa21.83■■□□□ 1.09
SPOCK1-208ENST00000510405 UBE3BQ7Z3V4 1068 aa21.83■■□□□ 1.09
SPOCK1-208ENST00000510405 LARGE2Q8N3Y3 721 aa21.83■■□□□ 1.09
SPOCK1-208ENST00000510405 RBM46Q8TBY0 533 aaKnown RBP21.83■■□□□ 1.09
SPOCK1-208ENST00000510405 RRAGCQ9HB90 399 aa21.83■■□□□ 1.09
SPOCK1-208ENST00000510405 IQCA1LA6NCM1 817 aa21.82■■□□□ 1.08
SPOCK1-208ENST00000510405 ALDH1L1O75891 902 aa21.82■■□□□ 1.08
SPOCK1-208ENST00000510405 BEND3Q5T5X7 828 aa21.82■■□□□ 1.08
SPOCK1-208ENST00000510405 CELF1Q92879 486 aaKnown RBP21.82■■□□□ 1.08
SPOCK1-208ENST00000510405 CDCA7LQ96GN5 454 aa21.82■■□□□ 1.08
SPOCK1-208ENST00000510405 PPIP5K2O43314 1243 aa21.81■■□□□ 1.08
SPOCK1-208ENST00000510405 EIF6P56537 245 aaKnown RBP21.81■■□□□ 1.08
SPOCK1-208ENST00000510405 NIM1KQ8IY84 436 aa21.81■■□□□ 1.08
SPOCK1-208ENST00000510405 L3MBTL3Q96JM7 780 aaPredicted RBP21.81■■□□□ 1.08
SPOCK1-208ENST00000510405 FSTL1Q12841 308 aa21.8■■□□□ 1.08
SPOCK1-208ENST00000510405 ANKRD18AQ8IVF6 992 aa21.8■■□□□ 1.08
SPOCK1-208ENST00000510405 GPC2Q8N158 579 aa21.8■■□□□ 1.08
SPOCK1-208ENST00000510405 MRPL50Q8N5N7 158 aaKnown RBP21.8■■□□□ 1.08
SPOCK1-208ENST00000510405 TTLL11Q8NHH1 800 aa21.8■■□□□ 1.08
SPOCK1-208ENST00000510405 TAF1P21675 1872 aa21.79■■□□□ 1.08
SPOCK1-208ENST00000510405 SCN4AP35499 1836 aa21.79■■□□□ 1.08
SPOCK1-208ENST00000510405 F6X3S4 739 aa21.79■■□□□ 1.08
SPOCK1-208ENST00000510405 KIAA2012Q0VF49 1180 aa21.79■■□□□ 1.08
SPOCK1-208ENST00000510405 SRCIN1Q9C0H9 1055 aa21.79■■□□□ 1.08
SPOCK1-208ENST00000510405 SSH1Q8WYL5 1049 aa21.78■■□□□ 1.08
SPOCK1-208ENST00000510405 EYA3Q99504 573 aa21.78■■□□□ 1.08
SPOCK1-208ENST00000510405 PODXL2Q9NZ53 605 aa21.78■■□□□ 1.08
SPOCK1-208ENST00000510405 DDNO94850 711 aaPredicted RBP21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 BRPF1P55201 1214 aaPredicted RBP21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 CASP7P55210 303 aa21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 SLC4A10Q6U841 1118 aa21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 SMC1BQ8NDV3 1235 aa21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 JARID2Q92833 1246 aaPredicted RBP21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 SEC31BQ9NQW1 1179 aa21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 SMC4Q9NTJ3 1288 aa21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 NSFL1CQ9UNZ2 370 aaKnown RBP21.77■■□□□ 1.08
SPOCK1-208ENST00000510405 GRM8O00222 908 aa21.76■■□□□ 1.07
SPOCK1-208ENST00000510405 AOC3Q16853 763 aa21.76■■□□□ 1.07
SPOCK1-208ENST00000510405 DUOX1Q9NRD9 1551 aa21.76■■□□□ 1.07
SPOCK1-208ENST00000510405 C9orf78Q9NZ63 289 aaPredicted RBP21.76■■□□□ 1.07
SPOCK1-208ENST00000510405 ZNRF3Q9ULT6 936 aa21.76■■□□□ 1.07
SPOCK1-208ENST00000510405 ZNF541Q9H0D2 1346 aa21.76■■□□□ 1.07
SPOCK1-208ENST00000510405 LTBP1Q14766 1721 aa21.75■■□□□ 1.07
SPOCK1-208ENST00000510405 CSF1RP07333 972 aa21.75■■□□□ 1.07
SPOCK1-208ENST00000510405 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
SPOCK1-208ENST00000510405 WASHC4Q2M389 1173 aa21.75■■□□□ 1.07
SPOCK1-208ENST00000510405 BSDC1Q9NW68 430 aaPredicted RBP21.75■■□□□ 1.07
SPOCK1-208ENST00000510405 HSPA6P17066 643 aa21.74■■□□□ 1.07
SPOCK1-208ENST00000510405 IGHMBP2P38935 993 aaKnown RBP21.74■■□□□ 1.07
SPOCK1-208ENST00000510405 GREM2Q9H772 168 aa21.74■■□□□ 1.07
SPOCK1-208ENST00000510405 ANKIB1Q9P2G1 1089 aa21.74■■□□□ 1.07
SPOCK1-208ENST00000510405 XDHP47989 1333 aa21.74■■□□□ 1.07
SPOCK1-208ENST00000510405 COL4A5P29400 1685 aa21.73■■□□□ 1.07
SPOCK1-208ENST00000510405 POTECB2RU33 542 aa21.73■■□□□ 1.07
SPOCK1-208ENST00000510405 C6orf229H3BNL8 230 aa21.73■■□□□ 1.07
SPOCK1-208ENST00000510405 GPSM2P81274 684 aa21.73■■□□□ 1.07
SPOCK1-208ENST00000510405 GGA1Q9UJY5 639 aa21.73■■□□□ 1.07
SPOCK1-208ENST00000510405 TNIP1Q15025 636 aa21.72■■□□□ 1.07
SPOCK1-208ENST00000510405 CCDC85AQ96PX6 553 aaPredicted RBP21.72■■□□□ 1.07
SPOCK1-208ENST00000510405 HACL1Q9UJ83 578 aa21.72■■□□□ 1.07
SPOCK1-208ENST00000510405 KIF16BQ96L93 1317 aa21.72■■□□□ 1.07
SPOCK1-208ENST00000510405 ANKRD18BA2A2Z9 1011 aa21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 ITGA6P23229 1130 aa21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 LMOD1P29536 600 aaPredicted RBP21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 SLC51AQ86UW1 340 aa21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 PNMA8AQ86V59 439 aaPredicted RBP21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 TBC1D16Q8TBP0 767 aa21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 MPHOSPH8Q99549 860 aa21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 ZC3H12CQ9C0D7 883 aaKnown RBP21.71■■□□□ 1.07
SPOCK1-208ENST00000510405 COL4A1P02462 1669 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms