RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 IGKV5-2P06315 115 aa23.81■■□□□ 1.4
LSM6-206ENST00000510331 HSPA6P17066 643 aa23.81■■□□□ 1.4
LSM6-206ENST00000510331 FLIIQ13045 1269 aa23.81■■□□□ 1.4
LSM6-206ENST00000510331 JARID2Q92833 1246 aaPredicted RBP23.81■■□□□ 1.4
LSM6-206ENST00000510331 SCN4AP35499 1836 aa23.81■■□□□ 1.4
LSM6-206ENST00000510331 SPEF2Q9C093 1822 aa23.8■■□□□ 1.4
LSM6-206ENST00000510331 PCCAP05165 728 aaPredicted RBP23.8■■□□□ 1.4
LSM6-206ENST00000510331 VEGFAP15692 232 aaPredicted RBP23.8■■□□□ 1.4
LSM6-206ENST00000510331 SF3B3Q15393 1217 aaKnown RBP23.8■■□□□ 1.4
LSM6-206ENST00000510331 GRIPAP1Q4V328 841 aa23.79■■□□□ 1.4
LSM6-206ENST00000510331 CELF1Q92879 486 aaKnown RBP23.79■■□□□ 1.4
LSM6-206ENST00000510331 BBOX1O75936 387 aa23.78■■□□□ 1.4
LSM6-206ENST00000510331 CWF19L2Q2TBE0 894 aaKnown RBP23.78■■□□□ 1.4
LSM6-206ENST00000510331 FKBP5Q13451 457 aaPredicted RBP23.77■■□□□ 1.4
LSM6-206ENST00000510331 TMX4Q9H1E5 349 aaPredicted RBP23.77■■□□□ 1.4
LSM6-206ENST00000510331 NEURL1BA8MQ27 555 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 CCER2I3L3R5 266 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 FZD9O00144 591 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 NEXNQ0ZGT2 675 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 AOC3Q16853 763 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 DPP8Q6V1X1 898 aaPredicted RBP23.76■■□□□ 1.39
LSM6-206ENST00000510331 SP8Q8IXZ3 490 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 LARGE2Q8N3Y3 721 aa23.76■■□□□ 1.39
LSM6-206ENST00000510331 PPIP5K2O43314 1243 aa23.75■■□□□ 1.39
LSM6-206ENST00000510331 JDP2Q8WYK2 163 aa23.75■■□□□ 1.39
LSM6-206ENST00000510331 L3MBTL3Q96JM7 780 aaPredicted RBP23.75■■□□□ 1.39
LSM6-206ENST00000510331 CDHR2Q9BYE9 1310 aa23.75■■□□□ 1.39
LSM6-206ENST00000510331 FSTL1Q12841 308 aa23.74■■□□□ 1.39
LSM6-206ENST00000510331 SMC1BQ8NDV3 1235 aa23.74■■□□□ 1.39
LSM6-206ENST00000510331 CCDC85AQ96PX6 553 aaPredicted RBP23.74■■□□□ 1.39
LSM6-206ENST00000510331 RTFDC1Q9BY42 306 aaPredicted RBP23.74■■□□□ 1.39
LSM6-206ENST00000510331 SEC31BQ9NQW1 1179 aa23.74■■□□□ 1.39
LSM6-206ENST00000510331 ADAMTSL1Q8N6G6 1762 aa23.73■■□□□ 1.39
LSM6-206ENST00000510331 TMC4Q7Z404 712 aa23.73■■□□□ 1.39
LSM6-206ENST00000510331 MPNDQ8N594 471 aa23.73■■□□□ 1.39
LSM6-206ENST00000510331 DNAAF4Q8WXU2 420 aa23.73■■□□□ 1.39
LSM6-206ENST00000510331 PDE8AO60658 829 aa23.72■■□□□ 1.39
LSM6-206ENST00000510331 NIM1KQ8IY84 436 aa23.72■■□□□ 1.39
LSM6-206ENST00000510331 POTEIP0CG38 1075 aa23.71■■□□□ 1.39
LSM6-206ENST00000510331 POTEJP0CG39 1038 aa23.71■■□□□ 1.39
LSM6-206ENST00000510331 HSP90B1P14625 803 aaKnown RBP23.71■■□□□ 1.39
LSM6-206ENST00000510331 CTSWP56202 376 aa23.71■■□□□ 1.39
LSM6-206ENST00000510331 UBE3BQ7Z3V4 1068 aa23.71■■□□□ 1.39
LSM6-206ENST00000510331 SUPT20HQ8NEM7 779 aa23.71■■□□□ 1.39
LSM6-206ENST00000510331 F6X3S4 739 aa23.7■■□□□ 1.38
LSM6-206ENST00000510331 CCDC152Q4G0S7 254 aa23.7■■□□□ 1.38
LSM6-206ENST00000510331 GPC2Q8N158 579 aa23.7■■□□□ 1.38
LSM6-206ENST00000510331 IQCA1LA6NCM1 817 aa23.69■■□□□ 1.38
LSM6-206ENST00000510331 EIF6P56537 245 aaKnown RBP23.69■■□□□ 1.38
LSM6-206ENST00000510331 GPSM2P81274 684 aa23.69■■□□□ 1.38
LSM6-206ENST00000510331 GCKRQ14397 625 aa23.69■■□□□ 1.38
LSM6-206ENST00000510331 GJA3Q9Y6H8 435 aa23.69■■□□□ 1.38
LSM6-206ENST00000510331 E9PSI1 815 aa23.68■■□□□ 1.38
LSM6-206ENST00000510331 APLP1P51693 650 aa23.68■■□□□ 1.38
LSM6-206ENST00000510331 RPS8P62241 208 aaKnown RBP23.68■■□□□ 1.38
LSM6-206ENST00000510331 KIAA2012Q0VF49 1180 aa23.68■■□□□ 1.38
LSM6-206ENST00000510331 LINS1Q8NG48 757 aa23.68■■□□□ 1.38
LSM6-206ENST00000510331 TAF1DQ9H5J8 278 aaPredicted RBP23.68■■□□□ 1.38
LSM6-206ENST00000510331 HACL1Q9UJ83 578 aa23.67■■□□□ 1.38
LSM6-206ENST00000510331 H7C1W4 665 aa23.66■■□□□ 1.38
LSM6-206ENST00000510331 HTRA3P83110 453 aa23.66■■□□□ 1.38
LSM6-206ENST00000510331 CDCA7LQ96GN5 454 aa23.66■■□□□ 1.38
LSM6-206ENST00000510331 VPS33BQ9H267 617 aa23.66■■□□□ 1.38
LSM6-206ENST00000510331 NSFL1CQ9UNZ2 370 aaKnown RBP23.66■■□□□ 1.38
LSM6-206ENST00000510331 CASP7P55210 303 aa23.65■■□□□ 1.38
LSM6-206ENST00000510331 SLFN5Q08AF3 891 aa23.65■■□□□ 1.38
LSM6-206ENST00000510331 GPR101Q96P66 508 aaPredicted RBP23.65■■□□□ 1.38
LSM6-206ENST00000510331 GREM2Q9H772 168 aa23.65■■□□□ 1.38
LSM6-206ENST00000510331 POLLQ9UGP5 575 aa23.65■■□□□ 1.38
LSM6-206ENST00000510331 RTL9Q8NET4 1388 aa23.65■■□□□ 1.38
LSM6-206ENST00000510331 EPHX2P34913 555 aa23.64■■□□□ 1.37
LSM6-206ENST00000510331 SCNN1DP51172 638 aa23.64■■□□□ 1.37
LSM6-206ENST00000510331 BEND3Q5T5X7 828 aa23.64■■□□□ 1.37
LSM6-206ENST00000510331 TTLL11Q8NHH1 800 aa23.64■■□□□ 1.37
LSM6-206ENST00000510331 ZNRF3Q9ULT6 936 aa23.64■■□□□ 1.37
LSM6-206ENST00000510331 A0A1B0GUL6 1792 aa23.64■■□□□ 1.37
LSM6-206ENST00000510331 SCN9AQ15858 1988 aa23.63■■□□□ 1.37
LSM6-206ENST00000510331 EAPPQ56P03 285 aaPredicted RBP23.63■■□□□ 1.37
LSM6-206ENST00000510331 CHADLQ6NUI6 762 aa23.63■■□□□ 1.37
LSM6-206ENST00000510331 ANKRD18AQ8IVF6 992 aa23.63■■□□□ 1.37
LSM6-206ENST00000510331 YDJCA8MPS7 323 aa23.62■■□□□ 1.37
LSM6-206ENST00000510331 C6orf229H3BNL8 230 aa23.62■■□□□ 1.37
LSM6-206ENST00000510331 LDHDQ86WU2 507 aa23.62■■□□□ 1.37
LSM6-206ENST00000510331 TBC1D16Q8TBP0 767 aa23.62■■□□□ 1.37
LSM6-206ENST00000510331 CXCL9Q07325 125 aa23.61■■□□□ 1.37
LSM6-206ENST00000510331 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
LSM6-206ENST00000510331 DIEXFQ68CQ4 756 aaKnown RBP23.61■■□□□ 1.37
LSM6-206ENST00000510331 CDC5LQ99459 802 aaKnown RBP23.61■■□□□ 1.37
LSM6-206ENST00000510331 PLA2G12BQ9BX93 195 aa23.61■■□□□ 1.37
LSM6-206ENST00000510331 RIMBP2O15034 1052 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 RAD17O75943 681 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 UFL1O94874 794 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 LMOD1P29536 600 aaPredicted RBP23.6■■□□□ 1.37
LSM6-206ENST00000510331 WASHC4Q2M389 1173 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 MIER1Q8N108 512 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 MRPL50Q8N5N7 158 aaKnown RBP23.6■■□□□ 1.37
LSM6-206ENST00000510331 BCL2L13Q9BXK5 485 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 DBNDD1Q9H9R9 158 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 PODXL2Q9NZ53 605 aa23.6■■□□□ 1.37
LSM6-206ENST00000510331 ANKIB1Q9P2G1 1089 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms