RNA–Protein interactions for RNA: ENST00000510195.1

SNF8-208, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-208ENST00000510195 EAPPQ56P03 285 aaPredicted RBP34.41■■■■□ 3.1
SNF8-208ENST00000510195 SLC51AQ86UW1 340 aa34.41■■■■□ 3.1
SNF8-208ENST00000510195 DDX60Q8IY21 1712 aaKnown RBP34.41■■■■□ 3.1
SNF8-208ENST00000510195 PASKQ96RG2 1323 aa34.4■■■■□ 3.1
SNF8-208ENST00000510195 ANP32CO43423 234 aa34.4■■■■□ 3.1
SNF8-208ENST00000510195 AOC3Q16853 763 aa34.4■■■■□ 3.1
SNF8-208ENST00000510195 WWC1Q8IX03 1113 aa34.4■■■■□ 3.1
SNF8-208ENST00000510195 GJA3Q9Y6H8 435 aa34.4■■■■□ 3.1
SNF8-208ENST00000510195 DDX58O95786 925 aaKnown RBP34.39■■■■□ 3.1
SNF8-208ENST00000510195 LMOD1P29536 600 aaPredicted RBP34.39■■■■□ 3.1
SNF8-208ENST00000510195 ZBTB38Q8NAP3 1195 aaPredicted RBP34.39■■■■□ 3.1
SNF8-208ENST00000510195 CCDC191Q8NCU4 936 aa34.38■■■■□ 3.09
SNF8-208ENST00000510195 ZNRF3Q9ULT6 936 aa34.38■■■■□ 3.09
SNF8-208ENST00000510195 CLEC11AQ9Y240 323 aa34.38■■■■□ 3.09
SNF8-208ENST00000510195 ADAMTSL1Q8N6G6 1762 aa34.38■■■■□ 3.09
SNF8-208ENST00000510195 IL16Q14005 1332 aa34.37■■■■□ 3.09
SNF8-208ENST00000510195 IRS4O14654 1257 aaPredicted RBP34.37■■■■□ 3.09
SNF8-208ENST00000510195 ITGBL1O95965 494 aaPredicted RBP34.37■■■■□ 3.09
SNF8-208ENST00000510195 KIAA2012Q0VF49 1180 aa34.37■■■■□ 3.09
SNF8-208ENST00000510195 MRS2Q9HD23 443 aa34.37■■■■□ 3.09
SNF8-208ENST00000510195 IFFO2Q5TF58 517 aa34.36■■■■□ 3.09
SNF8-208ENST00000510195 SCNN1DP51172 638 aa34.35■■■■□ 3.09
SNF8-208ENST00000510195 ZNF428Q96B54 188 aa34.35■■■■□ 3.09
SNF8-208ENST00000510195 TSPYL6Q8N831 410 aa34.34■■■■□ 3.09
SNF8-208ENST00000510195 MYD88Q99836 296 aa34.34■■■■□ 3.09
SNF8-208ENST00000510195 METTL22Q9BUU2 404 aaPredicted RBP34.34■■■■□ 3.09
SNF8-208ENST00000510195 LRRC37AA6NMS7 1700 aa34.33■■■■□ 3.09
SNF8-208ENST00000510195 RTL5Q5HYW3 569 aaPredicted RBP34.32■■■■□ 3.08
SNF8-208ENST00000510195 TSR2Q969E8 191 aaKnown RBP34.32■■■■□ 3.08
SNF8-208ENST00000510195 TAF1P21675 1872 aa34.32■■■■□ 3.08
SNF8-208ENST00000510195 PCCAP05165 728 aaPredicted RBP34.31■■■■□ 3.08
SNF8-208ENST00000510195 CXCL9Q07325 125 aa34.31■■■■□ 3.08
SNF8-208ENST00000510195 USP50Q70EL3 339 aaPredicted RBP34.31■■■■□ 3.08
SNF8-208ENST00000510195 CNTROBQ8N137 903 aa34.31■■■■□ 3.08
SNF8-208ENST00000510195 CELF1Q92879 486 aaKnown RBP34.31■■■■□ 3.08
SNF8-208ENST00000510195 STK31Q9BXU1 1019 aa34.31■■■■□ 3.08
SNF8-208ENST00000510195 CWC25Q9NXE8 425 aaPredicted RBP34.31■■■■□ 3.08
SNF8-208ENST00000510195 TMEM88BA6NKF7 163 aa34.29■■■■□ 3.08
SNF8-208ENST00000510195 EPS15P42566 896 aa34.29■■■■□ 3.08
SNF8-208ENST00000510195 KSR2Q6VAB6 950 aa34.29■■■■□ 3.08
SNF8-208ENST00000510195 LTBP1Q14766 1721 aa34.28■■■■□ 3.08
SNF8-208ENST00000510195 RPS8P62241 208 aaKnown RBP34.28■■■■□ 3.08
SNF8-208ENST00000510195 TNIP1Q15025 636 aa34.28■■■■□ 3.08
SNF8-208ENST00000510195 TWISTNBQ3B726 338 aaPredicted RBP34.28■■■■□ 3.08
SNF8-208ENST00000510195 CDHR2Q9BYE9 1310 aa34.28■■■■□ 3.08
SNF8-208ENST00000510195 CIAPIN1Q6FI81 312 aa34.27■■■■□ 3.08
SNF8-208ENST00000510195 GPRC5DQ9NZD1 345 aa34.27■■■■□ 3.08
SNF8-208ENST00000510195 NSFL1CQ9UNZ2 370 aaKnown RBP34.27■■■■□ 3.08
SNF8-208ENST00000510195 MAP3K2Q9Y2U5 619 aa34.27■■■■□ 3.08
SNF8-208ENST00000510195 PDE8AO60658 829 aa34.26■■■■□ 3.08
SNF8-208ENST00000510195 MAP1SQ66K74 1059 aaPredicted RBP34.26■■■■□ 3.08
SNF8-208ENST00000510195 WDR63Q8IWG1 891 aa34.26■■■■□ 3.08
SNF8-208ENST00000510195 DUOX1Q9NRD9 1551 aa34.25■■■■□ 3.07
SNF8-208ENST00000510195 WASHC4Q2M389 1173 aa34.25■■■■□ 3.07
SNF8-208ENST00000510195 CCDC152Q4G0S7 254 aa34.25■■■■□ 3.07
SNF8-208ENST00000510195 ADARB2Q9NS39 739 aaKnown RBP34.25■■■■□ 3.07
SNF8-208ENST00000510195 PI4KAP2A4QPH2 592 aa34.24■■■■□ 3.07
SNF8-208ENST00000510195 PI4KAP1Q8N8J0 262 aa34.24■■■■□ 3.07
SNF8-208ENST00000510195 CNTNAP1P78357 1384 aa34.23■■■■□ 3.07
SNF8-208ENST00000510195 NEXNQ0ZGT2 675 aa34.23■■■■□ 3.07
SNF8-208ENST00000510195 EYA3Q99504 573 aa34.22■■■■□ 3.07
SNF8-208ENST00000510195 MKRN1Q9UHC7 482 aaKnown RBP34.22■■■■□ 3.07
SNF8-208ENST00000510195 PODXL2Q9NZ53 605 aa34.21■■■■□ 3.07
SNF8-208ENST00000510195 SLC4A2P04920 1241 aa34.2■■■■□ 3.07
SNF8-208ENST00000510195 GMPSP49915 693 aaPredicted RBP34.2■■■■□ 3.07
SNF8-208ENST00000510195 GPSM2P81274 684 aa34.2■■■■□ 3.07
SNF8-208ENST00000510195 POLLQ9UGP5 575 aa34.2■■■■□ 3.07
SNF8-208ENST00000510195 C6orf229H3BNL8 230 aa34.19■■■■□ 3.06
SNF8-208ENST00000510195 RAD17O75943 681 aa34.19■■■■□ 3.06
SNF8-208ENST00000510195 IGKV5-2P06315 115 aa34.19■■■■□ 3.06
SNF8-208ENST00000510195 SEC31BQ9NQW1 1179 aa34.19■■■■□ 3.06
SNF8-208ENST00000510195 YDJCA8MPS7 323 aa34.18■■■■□ 3.06
SNF8-208ENST00000510195 BCL2L13Q9BXK5 485 aa34.18■■■■□ 3.06
SNF8-208ENST00000510195 TBC1D16Q8TBP0 767 aa34.17■■■■□ 3.06
SNF8-208ENST00000510195 FANCIQ9NVI1 1328 aa34.17■■■■□ 3.06
SNF8-208ENST00000510195 CACNA1FO60840 1977 aa34.16■■■■□ 3.06
SNF8-208ENST00000510195 HSPA1AP0DMV8 641 aaKnown RBP34.16■■■■□ 3.06
SNF8-208ENST00000510195 HSPA1BP0DMV9 641 aaKnown RBP34.16■■■■□ 3.06
SNF8-208ENST00000510195 COL4A1P02462 1669 aa34.15■■■■□ 3.06
SNF8-208ENST00000510195 ZC3H15Q8WU90 426 aaKnown RBP34.15■■■■□ 3.06
SNF8-208ENST00000510195 DPF2Q92785 391 aa34.15■■■■□ 3.06
SNF8-208ENST00000510195 PGAP2Q9UHJ9 254 aa34.15■■■■□ 3.06
SNF8-208ENST00000510195 RASSF10A6NK89 507 aa34.14■■■■□ 3.06
SNF8-208ENST00000510195 NEURL1BA8MQ27 555 aa34.13■■■■□ 3.05
SNF8-208ENST00000510195 RIMBP2O15034 1052 aa34.13■■■■□ 3.05
SNF8-208ENST00000510195 G2E3Q7L622 706 aa34.13■■■■□ 3.05
SNF8-208ENST00000510195 JARID2Q92833 1246 aaPredicted RBP34.13■■■■□ 3.05
SNF8-208ENST00000510195 ZC3H12CQ9C0D7 883 aaKnown RBP34.13■■■■□ 3.05
SNF8-208ENST00000510195 ANKIB1Q9P2G1 1089 aa34.13■■■■□ 3.05
SNF8-208ENST00000510195 CTSWP56202 376 aa34.12■■■■□ 3.05
SNF8-208ENST00000510195 FLIIQ13045 1269 aa34.12■■■■□ 3.05
SNF8-208ENST00000510195 ANKRD18AQ8IVF6 992 aa34.12■■■■□ 3.05
SNF8-208ENST00000510195 CDC5LQ99459 802 aaKnown RBP34.12■■■■□ 3.05
SNF8-208ENST00000510195 DBNDD1Q9H9R9 158 aa34.12■■■■□ 3.05
SNF8-208ENST00000510195 CNOT7Q9UIV1 285 aaKnown RBP34.12■■■■□ 3.05
SNF8-208ENST00000510195 H7C1D1 291 aa34.11■■■■□ 3.05
SNF8-208ENST00000510195 VAMP4O75379 141 aa34.11■■■■□ 3.05
SNF8-208ENST00000510195 DEFB115Q30KQ5 88 aa34.11■■■■□ 3.05
SNF8-208ENST00000510195 GGA1Q9UJY5 639 aa34.11■■■■□ 3.05
SNF8-208ENST00000510195 SALL2Q9Y467 1007 aaPredicted RBP34.11■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms