RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 ZNF277Q9NRM2 450 aaPredicted RBP27.21■■□□□ 1.95
UBE2D3-229ENST00000510129 PDE8AO60658 829 aa27.2■■□□□ 1.94
UBE2D3-229ENST00000510129 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.94
UBE2D3-229ENST00000510129 DNAAF4Q8WXU2 420 aa27.2■■□□□ 1.94
UBE2D3-229ENST00000510129 JDP2Q8WYK2 163 aa27.2■■□□□ 1.94
UBE2D3-229ENST00000510129 IGKV5-2P06315 115 aa27.19■■□□□ 1.94
UBE2D3-229ENST00000510129 VEGFAP15692 232 aaPredicted RBP27.19■■□□□ 1.94
UBE2D3-229ENST00000510129 SLFN5Q08AF3 891 aa27.19■■□□□ 1.94
UBE2D3-229ENST00000510129 CCDC152Q4G0S7 254 aa27.19■■□□□ 1.94
UBE2D3-229ENST00000510129 NEURL1BA8MQ27 555 aa27.18■■□□□ 1.94
UBE2D3-229ENST00000510129 LINS1Q8NG48 757 aa27.18■■□□□ 1.94
UBE2D3-229ENST00000510129 RRAGCQ9HB90 399 aa27.17■■□□□ 1.94
UBE2D3-229ENST00000510129 DPP8Q6V1X1 898 aaPredicted RBP27.16■■□□□ 1.94
UBE2D3-229ENST00000510129 WDR90Q96KV7 1748 aa27.16■■□□□ 1.94
UBE2D3-229ENST00000510129 CWF19L2Q2TBE0 894 aaKnown RBP27.15■■□□□ 1.94
UBE2D3-229ENST00000510129 MPNDQ8N594 471 aa27.15■■□□□ 1.94
UBE2D3-229ENST00000510129 RBM46Q8TBY0 533 aaKnown RBP27.15■■□□□ 1.94
UBE2D3-229ENST00000510129 RTFDC1Q9BY42 306 aaPredicted RBP27.15■■□□□ 1.94
UBE2D3-229ENST00000510129 GCKRQ14397 625 aa27.14■■□□□ 1.94
UBE2D3-229ENST00000510129 FZD9O00144 591 aa27.13■■□□□ 1.93
UBE2D3-229ENST00000510129 CT47B1P0C2W7 299 aaPredicted RBP27.13■■□□□ 1.93
UBE2D3-229ENST00000510129 RPS8P62241 208 aaKnown RBP27.13■■□□□ 1.93
UBE2D3-229ENST00000510129 LARGE2Q8N3Y3 721 aa27.13■■□□□ 1.93
UBE2D3-229ENST00000510129 IQCA1LA6NCM1 817 aa27.12■■□□□ 1.93
UBE2D3-229ENST00000510129 H7C1W4 665 aa27.12■■□□□ 1.93
UBE2D3-229ENST00000510129 MIER1Q8N108 512 aa27.12■■□□□ 1.93
UBE2D3-229ENST00000510129 LRRC37AA6NMS7 1700 aa27.12■■□□□ 1.93
UBE2D3-229ENST00000510129 PPIP5K2O43314 1243 aa27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 CTSWP56202 376 aa27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 EIF6P56537 245 aaKnown RBP27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 FSTL1Q12841 308 aa27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 UBE3BQ7Z3V4 1068 aa27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 NIM1KQ8IY84 436 aa27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 TRMT2AQ8IZ69 625 aaKnown RBP27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 CELF1Q92879 486 aaKnown RBP27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 L3MBTL3Q96JM7 780 aaPredicted RBP27.1■■□□□ 1.93
UBE2D3-229ENST00000510129 GPC2Q8N158 579 aa27.09■■□□□ 1.93
UBE2D3-229ENST00000510129 CDC5LQ99459 802 aaKnown RBP27.09■■□□□ 1.93
UBE2D3-229ENST00000510129 PLA2G12BQ9BX93 195 aa27.09■■□□□ 1.93
UBE2D3-229ENST00000510129 RTL9Q8NET4 1388 aa27.09■■□□□ 1.93
UBE2D3-229ENST00000510129 DDNO94850 711 aaPredicted RBP27.08■■□□□ 1.93
UBE2D3-229ENST00000510129 ALDH1L2Q3SY69 923 aa27.08■■□□□ 1.93
UBE2D3-229ENST00000510129 PTPRCP08575 1304 aa27.08■■□□□ 1.93
UBE2D3-229ENST00000510129 MYH3P11055 1940 aa27.08■■□□□ 1.93
UBE2D3-229ENST00000510129 ALDH1L1O75891 902 aa27.07■■□□□ 1.92
UBE2D3-229ENST00000510129 BEND3Q5T5X7 828 aa27.07■■□□□ 1.92
UBE2D3-229ENST00000510129 ANKRD18AQ8IVF6 992 aa27.07■■□□□ 1.92
UBE2D3-229ENST00000510129 SMC1BQ8NDV3 1235 aa27.07■■□□□ 1.92
UBE2D3-229ENST00000510129 JARID2Q92833 1246 aaPredicted RBP27.07■■□□□ 1.92
UBE2D3-229ENST00000510129 TAF1P21675 1872 aa27.06■■□□□ 1.92
UBE2D3-229ENST00000510129 KIAA2012Q0VF49 1180 aa27.06■■□□□ 1.92
UBE2D3-229ENST00000510129 TTLL11Q8NHH1 800 aa27.06■■□□□ 1.92
UBE2D3-229ENST00000510129 CDCA7LQ96GN5 454 aa27.06■■□□□ 1.92
UBE2D3-229ENST00000510129 NSFL1CQ9UNZ2 370 aaKnown RBP27.06■■□□□ 1.92
UBE2D3-229ENST00000510129 SCN4AP35499 1836 aa27.06■■□□□ 1.92
UBE2D3-229ENST00000510129 F6X3S4 739 aa27.05■■□□□ 1.92
UBE2D3-229ENST00000510129 HSPA6P17066 643 aa27.05■■□□□ 1.92
UBE2D3-229ENST00000510129 EYA3Q99504 573 aa27.05■■□□□ 1.92
UBE2D3-229ENST00000510129 ZNF541Q9H0D2 1346 aa27.05■■□□□ 1.92
UBE2D3-229ENST00000510129 AOC3Q16853 763 aa27.04■■□□□ 1.92
UBE2D3-229ENST00000510129 MRPL50Q8N5N7 158 aaKnown RBP27.04■■□□□ 1.92
UBE2D3-229ENST00000510129 SRCIN1Q9C0H9 1055 aa27.04■■□□□ 1.92
UBE2D3-229ENST00000510129 SEC31BQ9NQW1 1179 aa27.04■■□□□ 1.92
UBE2D3-229ENST00000510129 ZNRF3Q9ULT6 936 aa27.04■■□□□ 1.92
UBE2D3-229ENST00000510129 POTECB2RU33 542 aa27.03■■□□□ 1.92
UBE2D3-229ENST00000510129 PODXL2Q9NZ53 605 aa27.03■■□□□ 1.92
UBE2D3-229ENST00000510129 CASP7P55210 303 aa27.02■■□□□ 1.92
UBE2D3-229ENST00000510129 WASHC4Q2M389 1173 aa27.02■■□□□ 1.92
UBE2D3-229ENST00000510129 SLC4A10Q6U841 1118 aa27.02■■□□□ 1.92
UBE2D3-229ENST00000510129 SSH1Q8WYL5 1049 aa27.02■■□□□ 1.92
UBE2D3-229ENST00000510129 CCDC85AQ96PX6 553 aaPredicted RBP27.01■■□□□ 1.91
UBE2D3-229ENST00000510129 C9orf78Q9NZ63 289 aaPredicted RBP27.01■■□□□ 1.91
UBE2D3-229ENST00000510129 ANKIB1Q9P2G1 1089 aa27.01■■□□□ 1.91
UBE2D3-229ENST00000510129 HACL1Q9UJ83 578 aa27.01■■□□□ 1.91
UBE2D3-229ENST00000510129 C6orf229H3BNL8 230 aa27■■□□□ 1.91
UBE2D3-229ENST00000510129 GRM8O00222 908 aa27■■□□□ 1.91
UBE2D3-229ENST00000510129 GPSM2P81274 684 aa27■■□□□ 1.91
UBE2D3-229ENST00000510129 SLC51AQ86UW1 340 aa27■■□□□ 1.91
UBE2D3-229ENST00000510129 GREM2Q9H772 168 aa27■■□□□ 1.91
UBE2D3-229ENST00000510129 BSDC1Q9NW68 430 aaPredicted RBP27■■□□□ 1.91
UBE2D3-229ENST00000510129 DUOX1Q9NRD9 1551 aa27■■□□□ 1.91
UBE2D3-229ENST00000510129 COL4A5P29400 1685 aa26.99■■□□□ 1.91
UBE2D3-229ENST00000510129 CSF1RP07333 972 aa26.99■■□□□ 1.91
UBE2D3-229ENST00000510129 IGHMBP2P38935 993 aaKnown RBP26.99■■□□□ 1.91
UBE2D3-229ENST00000510129 APLP1P51693 650 aa26.99■■□□□ 1.91
UBE2D3-229ENST00000510129 PNMA8AQ86V59 439 aaPredicted RBP26.99■■□□□ 1.91
UBE2D3-229ENST00000510129 XDHP47989 1333 aa26.98■■□□□ 1.91
UBE2D3-229ENST00000510129 LMOD1P29536 600 aaPredicted RBP26.98■■□□□ 1.91
UBE2D3-229ENST00000510129 TNIP1Q15025 636 aa26.98■■□□□ 1.91
UBE2D3-229ENST00000510129 SMC4Q9NTJ3 1288 aa26.98■■□□□ 1.91
UBE2D3-229ENST00000510129 GGA1Q9UJY5 639 aa26.98■■□□□ 1.91
UBE2D3-229ENST00000510129 LTBP1Q14766 1721 aa26.98■■□□□ 1.91
UBE2D3-229ENST00000510129 TBC1D16Q8TBP0 767 aa26.97■■□□□ 1.91
UBE2D3-229ENST00000510129 ZC3H12CQ9C0D7 883 aaKnown RBP26.97■■□□□ 1.91
UBE2D3-229ENST00000510129 TAF1DQ9H5J8 278 aaPredicted RBP26.97■■□□□ 1.91
UBE2D3-229ENST00000510129 GJA3Q9Y6H8 435 aa26.97■■□□□ 1.91
UBE2D3-229ENST00000510129 ITGA6P23229 1130 aa26.96■■□□□ 1.91
UBE2D3-229ENST00000510129 POLLQ9UGP5 575 aa26.96■■□□□ 1.91
UBE2D3-229ENST00000510129 COL4A1P02462 1669 aa26.95■■□□□ 1.91
UBE2D3-229ENST00000510129 ANKRD18BA2A2Z9 1011 aa26.95■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms