RNA–Protein interactions for RNA: ENST00000510108.1

NEK1-205, Transcript of NIMA related kinase 1, humanhuman

TSL 5

Gene NEK1, Length 1,304 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-205ENST00000510108 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 HLFQ16534 295 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 TXNRD1Q16881 649 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 CLEC4GQ6UXB4 293 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 BBXQ8WY36 941 aaPredicted RBP12.72□□□□□ -0.37
NEK1-205ENST00000510108 SLC39A7Q92504 469 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 KAZALD1Q96I82 304 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 SUCLG2Q96I99 432 aa12.72□□□□□ -0.37
NEK1-205ENST00000510108 ZNF330Q9Y3S2 320 aaPredicted RBP12.72□□□□□ -0.37
NEK1-205ENST00000510108 CDHR2Q9BYE9 1310 aa12.71□□□□□ -0.37
NEK1-205ENST00000510108 PCCAP05165 728 aaPredicted RBP12.71□□□□□ -0.37
NEK1-205ENST00000510108 KCNQ4P56696 695 aa12.71□□□□□ -0.37
NEK1-205ENST00000510108 RABL6Q3YEC7 729 aaPredicted RBP12.71□□□□□ -0.37
NEK1-205ENST00000510108 TBC1D2BQ9UPU7 963 aa12.71□□□□□ -0.37
NEK1-205ENST00000510108 DDX60Q8IY21 1712 aaKnown RBP12.7□□□□□ -0.38
NEK1-205ENST00000510108 MYH3P11055 1940 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 PNMA6EA0A0J9YXQ4 647 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 GNPATO15228 680 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 DEFB132Q7Z7B7 95 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 NLRP10Q86W26 655 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 ZNF652Q9Y2D9 606 aa12.7□□□□□ -0.38
NEK1-205ENST00000510108 RTCBQ9Y3I0 505 aaKnown RBP12.7□□□□□ -0.38
NEK1-205ENST00000510108 UBN2Q6ZU65 1347 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 C7P10643 843 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 SSFA2P28290 1259 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 NUCB1Q02818 461 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 EZH2Q15910 746 aaKnown RBP12.69□□□□□ -0.38
NEK1-205ENST00000510108 PARP10Q53GL7 1025 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 UBE3BQ7Z3V4 1068 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 PPP1R42Q7Z4L9 355 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 ZBTB38Q8NAP3 1195 aaPredicted RBP12.69□□□□□ -0.38
NEK1-205ENST00000510108 AK7Q96M32 723 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 STK32BQ9NY57 414 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 PDZRN3Q9UPQ7 1066 aa12.69□□□□□ -0.38
NEK1-205ENST00000510108 USP42Q9H9J4 1324 aaKnown RBP12.69□□□□□ -0.38
NEK1-205ENST00000510108 AMIGO3Q86WK7 504 aa12.68□□□□□ -0.38
NEK1-205ENST00000510108 BICC1Q9H694 974 aaKnown RBP12.68□□□□□ -0.38
NEK1-205ENST00000510108 BCL2L12Q9HB09 334 aa12.68□□□□□ -0.38
NEK1-205ENST00000510108 METRNQ9UJH8 293 aa12.68□□□□□ -0.38
NEK1-205ENST00000510108 LRP5O75197 1615 aa12.68□□□□□ -0.38
NEK1-205ENST00000510108 SRGAP3O43295 1099 aa12.67□□□□□ -0.38
NEK1-205ENST00000510108 FOXO4P98177 505 aa12.67□□□□□ -0.38
NEK1-205ENST00000510108 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
NEK1-205ENST00000510108 CAMKK2Q96RR4 588 aa12.67□□□□□ -0.38
NEK1-205ENST00000510108 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
NEK1-205ENST00000510108 NOP58Q9Y2X3 529 aaKnown RBP12.67□□□□□ -0.38
NEK1-205ENST00000510108 CASZ1Q86V15 1759 aa12.67□□□□□ -0.38
NEK1-205ENST00000510108 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
NEK1-205ENST00000510108 CHD1LQ86WJ1 897 aa12.66□□□□□ -0.38
NEK1-205ENST00000510108 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
NEK1-205ENST00000510108 NTSR2O95665 410 aa12.65□□□□□ -0.38
NEK1-205ENST00000510108 GPTP24298 496 aa12.65□□□□□ -0.38
NEK1-205ENST00000510108 RFX5P48382 616 aaPredicted RBP12.65□□□□□ -0.38
NEK1-205ENST00000510108 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
NEK1-205ENST00000510108 ARXQ96QS3 562 aa12.65□□□□□ -0.38
NEK1-205ENST00000510108 TFCP2L1Q9NZI6 479 aa12.65□□□□□ -0.38
NEK1-205ENST00000510108 RIC1Q4ADV7 1423 aa12.65□□□□□ -0.38
NEK1-205ENST00000510108 RAB11FIP3O75154 756 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 PDE4AP27815 886 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 ZNF827Q17R98 1081 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 HSP90AB4PQ58FF6 505 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 SUSD4Q5VX71 490 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 USPL1Q5W0Q7 1092 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 COPRSQ9NQ92 184 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 SH3TC1Q8TE82 1336 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 NRXN2Q9P2S2 1712 aa12.64□□□□□ -0.39
NEK1-205ENST00000510108 RTL9Q8NET4 1388 aa12.63□□□□□ -0.39
NEK1-205ENST00000510108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.63□□□□□ -0.39
NEK1-205ENST00000510108 ZPR1O75312 459 aa12.63□□□□□ -0.39
NEK1-205ENST00000510108 CSF1RP07333 972 aa12.63□□□□□ -0.39
NEK1-205ENST00000510108 UTP14AQ9BVJ6 771 aaKnown RBP12.63□□□□□ -0.39
NEK1-205ENST00000510108 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
NEK1-205ENST00000510108 SRP68Q9UHB9 627 aaKnown RBP12.63□□□□□ -0.39
NEK1-205ENST00000510108 TRMT112Q9UI30 125 aaKnown RBP12.63□□□□□ -0.39
NEK1-205ENST00000510108 COLQQ9Y215 455 aaPredicted RBP12.63□□□□□ -0.39
NEK1-205ENST00000510108 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
NEK1-205ENST00000510108 POTEFA5A3E0 1075 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 SEC24BO95487 1268 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 HSP90B1P14625 803 aaKnown RBP12.62□□□□□ -0.39
NEK1-205ENST00000510108 RFC4P35249 363 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 ANKRD45Q5TZF3 282 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 TBC1D9BQ66K14 1250 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 SKAP1Q86WV1 359 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 FBXO22Q8NEZ5 403 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 JARID2Q92833 1246 aaPredicted RBP12.62□□□□□ -0.39
NEK1-205ENST00000510108 FAM89AQ96GI7 184 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 EXOC6BQ9Y2D4 811 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 IRS4O14654 1257 aaPredicted RBP12.62□□□□□ -0.39
NEK1-205ENST00000510108 PDE8AO60658 829 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 PLCG2P16885 1265 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 CTSWP56202 376 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 PTPN12Q05209 780 aaKnown RBP12.62□□□□□ -0.39
NEK1-205ENST00000510108 LMBR1LQ6UX01 489 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 SMIM5Q71RC9 77 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 ERC1Q8IUD2 1116 aa12.62□□□□□ -0.39
NEK1-205ENST00000510108 LRRCC1Q9C099 1032 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms